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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
Capsicum annuum (28) | CA00g32430 | GATA family protein |
| CA00g34300 | GATA family protein | |
| CA00g60620 | GATA family protein | |
| CA00g87020 | GATA family protein | |
| CA01g06170 | GATA family protein | |
| CA01g14220 | GATA family protein | |
| CA01g19720 | GATA family protein | |
| CA01g31670 | GATA family protein | |
| CA01g33720 | GATA family protein | |
| CA02g05270 | GATA family protein | |
| CA02g21840 | GATA family protein | |
| CA02g22480 | GATA family protein | |
| CA02g22540 | GATA family protein | |
| CA03g02360 | GATA family protein | |
| CA03g08030 | GATA family protein | |
| CA03g35040 | GATA family protein | |
| CA04g15240 | GATA family protein | |
| CA04g15250 | GATA family protein | |
| CA05g18390 | GATA family protein | |
| CA05g18400 | GATA family protein | |
| CA05g20740 | GATA family protein | |
| CA06g12750 | GATA family protein | |
| CA06g24040 | GATA family protein | |
| CA08g12420 | GATA family protein | |
| CA09g16580 | GATA family protein | |
| CA10g09180 | GATA family protein | |
| CA11g18920 | GATA family protein | |
| CA12g21330 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008




