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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
| CCG001742.1 | GATA family protein | |
| CCG003052.1 | GATA family protein | |
| CCG004543.1 | GATA family protein | |
| CCG004800.1 | GATA family protein | |
| CCG006701.1 | GATA family protein | |
| CCG006990.1 | GATA family protein | |
| CCG008094.1 | GATA family protein | |
| CCG009438.1 | GATA family protein | |
| CCG009508.1 | GATA family protein | |
| CCG010172.1 | GATA family protein | |
| CCG010488.1 | GATA family protein | |
| CCG011022.2 | GATA family protein | |
| CCG011646.1 | GATA family protein | |
| CCG011932.1 | GATA family protein | |
| CCG014614.1 | GATA family protein | |
| CCG014708.1 | GATA family protein | |
| CCG015190.1 | GATA family protein | |
| CCG015526.1 | GATA family protein | |
| CCG016667.2 | GATA family protein | |
| CCG017268.1 | GATA family protein | |
| CCG020210.2 | GATA family protein | |
| CCG022234.1 | GATA family protein | |
| CCG022304.1 | GATA family protein | |
| CCG022872.1 | GATA family protein | |
| CCG023574.1 | GATA family protein | |
| CCG026019.1 | GATA family protein | |
| CCG027631.1 | GATA family protein | |
| CCG027632.1 | GATA family protein | |
| CCG027915.1 | GATA family protein | |
| CCG028190.1 | GATA family protein | |
| CCG028453.1 | GATA family protein | |
| CCG028500.1 | GATA family protein | |
| CCG029961.1 | GATA family protein | |
| CCG030523.1 | GATA family protein | |
| CCG030524.1 | GATA family protein | |
| CCG031491.1 | GATA family protein | |
| CCG031641.2 | GATA family protein | |
| CCG031867.1 | GATA family protein | |
| CCG034138.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008




