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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
| Spipo0G0043400 | GATA family protein | |
| Spipo0G0060600 | GATA family protein | |
| Spipo0G0060800 | GATA family protein | |
| Spipo10G0007900 | GATA family protein | |
| Spipo11G0034200 | GATA family protein | |
| Spipo11G0059200 | GATA family protein | |
| Spipo11G0059500 | GATA family protein | |
| Spipo14G0016600 | GATA family protein | |
| Spipo18G0006400 | GATA family protein | |
| Spipo18G0038700 | GATA family protein | |
| Spipo19G0021800 | GATA family protein | |
| Spipo1G0002500 | GATA family protein | |
| Spipo1G0015100 | GATA family protein | |
| Spipo1G0082500 | GATA family protein | |
| Spipo1G0104600 | GATA family protein | |
| Spipo21G0024900 | GATA family protein | |
| Spipo21G0036200 | GATA family protein | |
| Spipo5G0062500 | GATA family protein | |
| Spipo8G0036600 | GATA family protein | |
| Spipo8G0071900 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008




