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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
Citrullus lanatus (110) | Cla000320 | MYB family protein |
| Cla000767 | MYB family protein | |
| Cla000783 | MYB family protein | |
| Cla001341 | MYB family protein | |
| Cla001702 | MYB family protein | |
| Cla003441 | MYB family protein | |
| Cla003566 | MYB family protein | |
| Cla004039 | MYB family protein | |
| Cla004188 | MYB family protein | |
| Cla004328 | MYB family protein | |
| Cla004362 | MYB family protein | |
| Cla004450 | MYB family protein | |
| Cla005093 | MYB family protein | |
| Cla005135 | MYB family protein | |
| Cla005321 | MYB family protein | |
| Cla005982 | MYB family protein | |
| Cla006186 | MYB family protein | |
| Cla006720 | MYB family protein | |
| Cla006761 | MYB family protein | |
| Cla007114 | MYB family protein | |
| Cla007586 | MYB family protein | |
| Cla007626 | MYB family protein | |
| Cla007663 | MYB family protein | |
| Cla007715 | MYB family protein | |
| Cla007719 | MYB family protein | |
| Cla007815 | MYB family protein | |
| Cla007846 | MYB family protein | |
| Cla008173 | MYB family protein | |
| Cla008278 | MYB family protein | |
| Cla008279 | MYB family protein | |
| Cla008544 | MYB family protein | |
| Cla008710 | MYB family protein | |
| Cla009078 | MYB family protein | |
| Cla009156 | MYB family protein | |
| Cla009263 | MYB family protein | |
| Cla009903 | MYB family protein | |
| Cla010167 | MYB family protein | |
| Cla010193 | MYB family protein | |
| Cla010316 | MYB family protein | |
| Cla010332 | MYB family protein | |
| Cla010413 | MYB family protein | |
| Cla010415 | MYB family protein | |
| Cla010722 | MYB family protein | |
| Cla011345 | MYB family protein | |
| Cla011417 | MYB family protein | |
| Cla011548 | MYB family protein | |
| Cla011845 | MYB family protein | |
| Cla012519 | MYB family protein | |
| Cla012581 | MYB family protein | |
| Cla012590 | MYB family protein | |
| Cla013009 | MYB family protein | |
| Cla013013 | MYB family protein | |
| Cla013099 | MYB family protein | |
| Cla013280 | MYB family protein | |
| Cla013461 | MYB family protein | |
| Cla013668 | MYB family protein | |
| Cla013687 | MYB family protein | |
| Cla013871 | MYB family protein | |
| Cla013979 | MYB family protein | |
| Cla014029 | MYB family protein | |
| Cla014058 | MYB family protein | |
| Cla014140 | MYB family protein | |
| Cla014141 | MYB family protein | |
| Cla015165 | MYB family protein | |
| Cla015834 | MYB family protein | |
| Cla016229 | MYB family protein | |
| Cla016504 | MYB family protein | |
| Cla016689 | MYB family protein | |
| Cla016980 | MYB family protein | |
| Cla017012 | MYB family protein | |
| Cla017100 | MYB family protein | |
| Cla017267 | MYB family protein | |
| Cla017337 | MYB family protein | |
| Cla017373 | MYB family protein | |
| Cla017463 | MYB family protein | |
| Cla017496 | MYB family protein | |
| Cla017787 | MYB family protein | |
| Cla017797 | MYB family protein | |
| Cla017897 | MYB family protein | |
| Cla017966 | MYB family protein | |
| Cla018121 | MYB family protein | |
| Cla018139 | MYB family protein | |
| Cla018501 | MYB family protein | |
| Cla018610 | MYB family protein | |
| Cla018657 | MYB family protein | |
| Cla018803 | MYB family protein | |
| Cla018967 | MYB family protein | |
| Cla018988 | MYB family protein | |
| Cla019115 | MYB family protein | |
| Cla019144 | MYB family protein | |
| Cla019199 | MYB family protein | |
| Cla019223 | MYB family protein | |
| Cla019451 | MYB family protein | |
| Cla019999 | MYB family protein | |
| Cla020042 | MYB family protein | |
| Cla020285 | MYB family protein | |
| Cla020633 | MYB family protein | |
| Cla020702 | MYB family protein | |
| Cla020901 | MYB family protein | |
| Cla021243 | MYB family protein | |
| Cla021474 | MYB family protein | |
| Cla021520 | MYB family protein | |
| Cla021776 | MYB family protein | |
| Cla021810 | MYB family protein | |
| Cla022224 | MYB family protein | |
| Cla022542 | MYB family protein | |
| Cla022601 | MYB family protein | |
| Cla022660 | MYB family protein | |
| Cla022852 | MYB family protein | |
| Cla023007 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504




