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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
Lactuca sativa (78) | Lsa000264 | MYB family protein |
| Lsa000624 | MYB family protein | |
| Lsa000705 | MYB family protein | |
| Lsa000774 | MYB family protein | |
| Lsa001002 | MYB family protein | |
| Lsa001266 | MYB family protein | |
| Lsa001572 | MYB family protein | |
| Lsa002875 | MYB family protein | |
| Lsa003301 | MYB family protein | |
| Lsa003349 | MYB family protein | |
| Lsa003506 | MYB family protein | |
| Lsa003943 | MYB family protein | |
| Lsa005096 | MYB family protein | |
| Lsa005217 | MYB family protein | |
| Lsa005262 | MYB family protein | |
| Lsa005644 | MYB family protein | |
| Lsa005721 | MYB family protein | |
| Lsa005989 | MYB family protein | |
| Lsa006019 | MYB family protein | |
| Lsa006136 | MYB family protein | |
| Lsa006227 | MYB family protein | |
| Lsa006232 | MYB family protein | |
| Lsa007048 | MYB family protein | |
| Lsa007401 | MYB family protein | |
| Lsa007623 | MYB family protein | |
| Lsa007751 | MYB family protein | |
| Lsa008127 | MYB family protein | |
| Lsa008822 | MYB family protein | |
| Lsa009092 | MYB family protein | |
| Lsa009134 | MYB family protein | |
| Lsa009210 | MYB family protein | |
| Lsa009317 | MYB family protein | |
| Lsa009361 | MYB family protein | |
| Lsa009424 | MYB family protein | |
| Lsa009574 | MYB family protein | |
| Lsa010336 | MYB family protein | |
| Lsa010815 | MYB family protein | |
| Lsa011256 | MYB family protein | |
| Lsa011281 | MYB family protein | |
| Lsa011539 | MYB family protein | |
| Lsa012007 | MYB family protein | |
| Lsa012275 | MYB family protein | |
| Lsa012288 | MYB family protein | |
| Lsa012737 | MYB family protein | |
| Lsa013029 | MYB family protein | |
| Lsa013049 | MYB family protein | |
| Lsa013065 | MYB family protein | |
| Lsa013253 | MYB family protein | |
| Lsa013283 | MYB family protein | |
| Lsa013437 | MYB family protein | |
| Lsa013567 | MYB family protein | |
| Lsa014003 | MYB family protein | |
| Lsa014195 | MYB family protein | |
| Lsa014824 | MYB family protein | |
| Lsa015221 | MYB family protein | |
| Lsa015278 | MYB family protein | |
| Lsa015488 | MYB family protein | |
| Lsa015504 | MYB family protein | |
| Lsa015528 | MYB family protein | |
| Lsa015609 | MYB family protein | |
| Lsa016279 | MYB family protein | |
| Lsa016343 | MYB family protein | |
| Lsa016957 | MYB family protein | |
| Lsa016967 | MYB family protein | |
| Lsa016974 | MYB family protein | |
| Lsa017033 | MYB family protein | |
| Lsa017360 | MYB family protein | |
| Lsa017404 | MYB family protein | |
| Lsa017588 | MYB family protein | |
| Lsa017717 | MYB family protein | |
| Lsa018242 | MYB family protein | |
| Lsa018525 | MYB family protein | |
| Lsa018538 | MYB family protein | |
| Lsa018727 | MYB family protein | |
| Lsa018813 | MYB family protein | |
| Lsa018822 | MYB family protein | |
| Lsa019065 | MYB family protein | |
| Lsa019235 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504




