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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
| OIV89729 | GATA family protein | |
| OIV91366 | GATA family protein | |
| OIV92711 | GATA family protein | |
| OIV92793 | GATA family protein | |
| OIV93376 | GATA family protein | |
| OIV94087 | GATA family protein | |
| OIV94566 | GATA family protein | |
| OIV94631 | GATA family protein | |
| OIV94794 | GATA family protein | |
| OIV94824 | GATA family protein | |
| OIV96646 | GATA family protein | |
| OIV97394 | GATA family protein | |
| OIV97687 | GATA family protein | |
| OIV97807 | GATA family protein | |
| OIV97842 | GATA family protein | |
| OIV98677 | GATA family protein | |
| OIV98696 | GATA family protein | |
| OIV99329 | GATA family protein | |
| OIV99515 | GATA family protein | |
| OIV99760 | GATA family protein | |
| OIW01449 | GATA family protein | |
| OIW02538 | GATA family protein | |
| OIW03313 | GATA family protein | |
| OIW04321 | GATA family protein | |
| OIW04323 | GATA family protein | |
| OIW05811 | GATA family protein | |
| OIW06722 | GATA family protein | |
| OIW07684 | GATA family protein | |
| OIW08736 | GATA family protein | |
| OIW09139 | GATA family protein | |
| OIW10856 | GATA family protein | |
| OIW11006 | GATA family protein | |
| OIW11025 | GATA family protein | |
| OIW13733 | GATA family protein | |
| OIW14408 | GATA family protein | |
| OIW14411 | GATA family protein | |
| OIW14559 | GATA family protein | |
| OIW14560 | GATA family protein | |
| OIW15343 | GATA family protein | |
| OIW15774 | GATA family protein | |
| OIW17009 | GATA family protein | |
| OIW17155 | GATA family protein | |
| OIW17684 | GATA family protein | |
| OIW18400 | GATA family protein | |
| OIW20063 | GATA family protein | |
| OIW21296 | GATA family protein | |
| OIW21870 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008




