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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
Mucuna pruriens (34) | RDX57678.1 | GATA family protein |
| RDX60716.1 | GATA family protein | |
| RDX62215.1 | GATA family protein | |
| RDX62498.1 | GATA family protein | |
| RDX65860.1 | GATA family protein | |
| RDX67359.1 | GATA family protein | |
| RDX67885.1 | GATA family protein | |
| RDX69829.1 | GATA family protein | |
| RDX70041.1 | GATA family protein | |
| RDX70080.1 | GATA family protein | |
| RDX70860.1 | GATA family protein | |
| RDX71551.1 | GATA family protein | |
| RDX72580.1 | GATA family protein | |
| RDX73003.1 | GATA family protein | |
| RDX73250.1 | GATA family protein | |
| RDX73653.1 | GATA family protein | |
| RDX74277.1 | GATA family protein | |
| RDX75949.1 | GATA family protein | |
| RDX76197.1 | GATA family protein | |
| RDX76231.1 | GATA family protein | |
| RDX76288.1 | GATA family protein | |
| RDX77441.1 | GATA family protein | |
| RDX77737.1 | GATA family protein | |
| RDX82988.1 | GATA family protein | |
| RDX83114.1 | GATA family protein | |
| RDX88593.1 | GATA family protein | |
| RDY02207.1 | GATA family protein | |
| RDY02820.1 | GATA family protein | |
| RDY04426.1 | GATA family protein | |
| RDY05476.1 | GATA family protein | |
| RDY05942.1 | GATA family protein | |
| RDY07716.1 | GATA family protein | |
| RDY09538.1 | GATA family protein | |
| RDY14734.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008




