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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1485
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Subtree rooted at node 121:
/--------------- Niben101Scf14929g00007.1 [Nicotiana benthamiana] (5)
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| /----- XP_016432826.1 [Nicotiana tabacum] (37)
/--69-+ /-100+
| | | \----- XP_009766292.1 [Nicotiana sylvestris] (65)
| \-100+
| | /----- XP_009600091.1 [Nicotiana tomentosiformis] (38)
/----99---+ \-100+
| | \----- XP_016471592.1 [Nicotiana tabacum] (71)
| |
| \--------------------- Niben101Scf00996g04023.1 [Nicotiana benthamiana] (48)
|
| /--------------------- CA09g08120 [Capsicum annuum] (12)
/-75-+ |
| | | /----- Sopim12g011200.0.1 [Solanum pimpinellifolium] (15)
| | | /-100+
| | /-84-+ | \----- Solyc12g011200.1.1 [Solanum lycopersicum] (47)
| | | | /-100+
| | | | | \---------- Sopen12g006560.1 [Solanum pennellii] (50)
/-72-+ \-100+ \-100-+
| | | \--------------- PGSC0003DMP400013709 [Solanum tuberosum] (67)
| | |
| | \-------------------------- Sme2.5_01461.1_g00006.1 [Solanum melongena] (46)
| |
| | /----- Peaxi162Scf00807g00004.1 [Petunia axillaris] (32)
| \--------------94--------------+
| \----- Peinf101Scf01109g09006.1 [Petunia inflata] (59)
|
| /--------------- PGSC0003DMP400030318 [Solanum tuberosum] (14)
/-70-+ |
| | /-100-+ /---------- Sopen07g029640.1 [Solanum pennellii] (18)
| | | | |
| | | \-99-+ /----- Sopim07g056280.0.1 [Solanum pimpinellifolium] (30)
| | /-100+ \-99-+
| | | | \----- Solyc07g056280.2.1 [Solanum lycopersicum] (44)
| | | |
| | | \--------------------- CA07g15490 [Capsicum annuum] (45)
| | |
| | | /----- Peinf101Scf00665g17027.1 [Petunia inflata] (23)
| \------99------+ /------100------+
| | | \----- Peaxi162Scf00111g00122.1 [Petunia axillaris] (26)
| | |
/--65-+ | | /---------- Niben101Scf23239g00002.1 [Nicotiana benthamiana] (27)
| | | | |
| | \-80-+ /-99-+ /----- XP_016468091.1 [Nicotiana tabacum] (54)
| | | | \-100+
| | | | \----- XP_009615724.1 [Nicotiana tomentosiformis] (58)
| | | |
| | \-100-+ /----- XP_009776873.1 [Nicotiana sylvestris] (35)
| | |---100---+
| | | \----- XP_016455219.1 [Nicotiana tabacum] (43)
| | |
| | \--------------- Niben101Scf01507g00004.1 [Nicotiana benthamiana] (60)
| |
| | /----- Itr_sc000114.1_g00042.1 [Ipomoea trifida] (29)
| \-------------------91-------------------+
| \----- Itr_sc000297.1_g00008.1 [Ipomoea trifida] (69)
|
| /----- Ote100247360041 [Ocimum tenuiflorum] (9)
/-58-+ /-100+
| | | \----- Ote100150970181 [Ocimum tenuiflorum] (22)
| | /-100+
| | | \---------- SMil_00001566-RA_Salv [Salvia miltiorrhiza] (25)
| | /-100-+
| | | \--------------- XP_011098088.1 [Sesamum indicum] (56)
| | /-98-+
| | | \--------------------- Migut.M00487.1.p [Mimulus guttatus] (42)
| | |
| |------------95-----------+ /----- Ote100207310041 [Ocimum tenuiflorum] (28)
/-66-+ | | /-97-+
| | | | | \----- XP_011082906.1 [Sesamum indicum] (68)
| | | \-------93------+
| | | \---------- SMil_00022052-RA_Salv [Salvia miltiorrhiza] (31)
| | |
| | | /----- Cc05_g09630 [Coffea canephora] (20)
--52-+ | \----------------------80----------------------+
| | \----- cra_locus_2950_iso_1 [Catharanthus roseus] (40)
| |
| \--------------------------------------------------------- Achn132991 [Actinidia chinensis] (6)
|
\-------------------------------------------------------------- DCAR_032121 [Daucus carota] (21)
Root part of tree:
/------------------------------------------------------------------- Sopim02g071130.0.1 [Solanum pimpinellifolium] (1)
|
|------------------------------------------------------------------- Solyc02g071130.2.1 [Solanum lycopersicum] (8)
|
| /------ XP_016490925.1 [Nicotiana tabacum] (2)
| /-100-+
| | \------ XP_009760855.1 [Nicotiana sylvestris] (64)
| /-100-+
| | | /------ Niben101Scf04881g01002.1 [Nicotiana benthamiana] (73)
| | \-100-+
| /--------100-------+ \------ Niben101Scf01785g07001.1 [Nicotiana benthamiana] (74)
| | |
| | | /------ XP_009616483.1 [Nicotiana tomentosiformis] (16)
| | \----100----+
| | \------ XP_016459945.1 [Nicotiana tabacum] (66)
| |
| | /------------------------ EPS57629.1 [Genlisea aurea] (3)
| | |
| | | /------ Ote100222560021 [Ocimum tenuiflorum] (4)
| | | /--99-+
| | | | \------ Ote100165010051 [Ocimum tenuiflorum] (49)
| | | /-100-+
| | | | \------------ SMil_00012644-RA_Salv [Salvia miltiorrhiza] (36)
| | |--88-+
| | | | /------ Migut.M00946.1.p [Mimulus guttatus] (34)
| | | \-----88----+
| | | \------ XP_011096511.1 [Sesamum indicum] (39)
| | |
| | | /------------ (121)
| /-100-+ | |
| | | |-----55----+ /------ DCAR_005083 [Daucus carota] (13)
| | | | \--60-+
| | | | \------ Achn230981 [Actinidia chinensis] (55)
+ | | |
| | | | /------ Migut.H01387.1.p [Mimulus guttatus] (7)
| | | | |
| | | /-100-+--------76-------+------ XP_011085274.1 [Sesamum indicum] (17)
| | | | | |
| | | | | \------ KZV51057.1 [Dorcoceras hygrometricum] (19)
| | | | |
| | | | | /------ cra_locus_28262_iso_1 [Catharanthus roseus] (10)
| | | | | /--97-+
| | | | | | \------ Cc09_g09190 [Coffea canephora] (75)
| | | | |-----59----+
| | | | | | /------ Itr_sc001370.1_g00002.1 [Ipomoea trifida] (33)
| | | | | \-100-+
| /-100-+ | | | \------ Itr_sc001446.1_g00003.1 [Ipomoea trifida] (41)
| | | | | |
| | | \--100-+ | /------ 678364323 [Utricularia gibba] (11)
| | | | |--------71-------+
| | | | | \------ 678420838 [Utricularia gibba] (24)
| | | | |
| | | | |------------------------ KZV56028.1 [Dorcoceras hygrometricum] (53)
| | | | |
| | | | | /------ SMil_00005188-RA_Salv [Salvia miltiorrhiza] (57)
| /-100-+ | | \--------64-------+
| | | | | \------ Ote100032390011 [Ocimum tenuiflorum] (62)
| | | | |
| | | | | /------ Peaxi162Scf01189g00009.1 [Petunia axillaris] (51)
| | | | \----------100----------+
| | | | \------ Peinf101Scf00040g09006.1 [Petunia inflata] (72)
| /-100-+ | |
| | | | \------------------------------------------- CA02g12180 [Capsicum annuum] (61)
| | | |
| | | \------------------------------------------------- Sme2.5_03980.1_g00003.1 [Solanum melongena] (63)
\-100-+ |
| \------------------------------------------------------- PGSC0003DMP400017131 [Solanum tuberosum] (70)
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\------------------------------------------------------------- Sopen02g020200.1 [Solanum pennellii] (52)
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