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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1843
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Subtree rooted at node 122:
/----- XP_016494385.1 [Nicotiana tabacum] (2)
/-97-+
| \----- XP_009785573.1 [Nicotiana sylvestris] (51)
/-99-+
| \---------- Niben101Scf03985g04006.1 [Nicotiana benthamiana] (29)
/-100-+
| \--------------- Niben101Scf02069g00017.1 [Nicotiana benthamiana] (60)
/---100---+
| | /----- XP_009613243.1 [Nicotiana tomentosiformis] (34)
| \------100------+
| \----- XP_016496488.1 [Nicotiana tabacum] (66)
|
/-100+ /-------------------------- CA01g01280 [Capsicum annuum] (3)
| | |
| | | /--------------- PGSC0003DMP400021486 [Solanum tuberosum] (15)
| | | |
| \-100+ | /----- Solyc08g082110.2.1 [Solanum lycopersicum] (26)
| | /-100-+ /-99-+
| | | | | \----- Sopim08g082110.0.1 [Solanum pimpinellifolium] (56)
/---100---+ | | \-100+
| | \-100+ \---------- Sopen08g030400.1 [Solanum pennellii] (67)
| | |
| | \--------------------- Sme2.5_00009.1_g00017.1 [Solanum melongena] (49)
| |
| | /----- Peinf101Scf00962g23035.1 [Petunia inflata] (12)
| \--------------100-------------+
| \----- Peaxi162Scf00074g01125.1 [Petunia axillaris] (18)
|
| /----- Ote100070990011 [Ocimum tenuiflorum] (4)
| /-97-+
| | \----- Ote100168810101 [Ocimum tenuiflorum] (30)
| /-97-+
| | \---------- SMil_00006684-RA_Salv [Salvia miltiorrhiza] (52)
| /--95-+
| | \--------------- Migut.E01246.1.p [Mimulus guttatus] (17)
| /----94---+
| | \--------------------- XP_011073725.1 [Sesamum indicum] (53)
| |
| |------------------------------- KZV31772.1 [Dorcoceras hygrometricum] (6)
| |
| | /--------------- EPS66609.1 [Genlisea aurea] (19)
| | |
| | | /----- 678392696 [Utricularia gibba] (23)
| | /--89-+ /-100+
| | | | | \----- 678458552 [Utricularia gibba] (28)
| | | \-55-+
/--99-+ | /-51-+ \---------- 678350400 [Utricularia gibba] (39)
| | /-80-+ | |
| | | | | \--------------------- Migut.A00671.1.p [Mimulus guttatus] (58)
| | | | |
| | | | | /----- Ote100124980041 [Ocimum tenuiflorum] (37)
| | | |-51-+ /-53-+
| | | | | | \----- Ote100026930081 [Ocimum tenuiflorum] (63)
| | | | | /-100+
| | | | | | \---------- SMil_00017718-RA_Salv [Salvia miltiorrhiza] (65)
| | | | \----95----+
| | | | \--------------- XP_011101023.1 [Sesamum indicum] (46)
| | | |
| | | \------------------------------- KZV35191.1 [Dorcoceras hygrometricum] (31)
| | /-99-+
| | | | /------------------------------- cra_locus_5093_iso_5 [Catharanthus roseus] (9)
| | | | |
| | | | | /----- Migut.J01293.1.p [Mimulus guttatus] (14)
| | | | | /-83-+
| | | | | | \----- XP_011070058.1 [Sesamum indicum] (25)
| | | | | /-84-+
| | | | | | \---------- DCAR_005379 [Daucus carota] (27)
| | | | | /--57-+
| | | | | | | /----- Cc02_g01860 [Coffea canephora] (21)
| | | | | | \---100---+
/-93-+ | | | | | \----- Achn011281 [Actinidia chinensis] (59)
| | | | \-58-+ /-54-+
| | \-99-+ | | | /----- Achn057931 [Actinidia chinensis] (43)
| | | | | | /-100+
| | | | | | | \----- Achn063361 [Actinidia chinensis] (57)
| | | |-65-+ \----100---+
| | | | | \---------- Achn184451 [Actinidia chinensis] (47)
| | | | |
| | | | | /----- DCAR_005034 [Daucus carota] (36)
| | | | \---------100--------+
| | | | \----- DCAR_027713 [Daucus carota] (40)
| | | |
| | | \------------------------------- Cc08_g15910 [Coffea canephora] (22)
| | |
| | | /----- Itr_sc001803.1_g00001.1 [Ipomoea trifida] (10)
| | \----------------100----------------+
| | \----- Itr_sc002956.1_g00001.1 [Ipomoea trifida] (33)
| |
/-99-+ | /----- XP_016453843.1 [Nicotiana tabacum] (24)
| | | /-----------100-----------+
| | | | \----- CA01g34480 [Capsicum annuum] (38)
| | | |
| | | | /-------------------------- PGSC0003DMP400010350 [Solanum tuberosum] (32)
| | \---------100--------+ |
| | | | /--------------- Niben101Scf03850g00006.1 [Nicotiana benthamiana] (42)
| | | | |
| | \-99-+ | /----- XP_016453844.1 [Nicotiana tabacum] (50)
| | | /-100-+ /-100+
| | | | | | \----- XP_009628594.1 [Nicotiana tomentosiformis] (61)
| | | | \-80-+
| | \-100+ \---------- XP_009768977.1 [Nicotiana sylvestris] (54)
| | |
--98-+ | \--------------------- XP_009628596.1 [Nicotiana tomentosiformis] (64)
| |
| | /----- Peaxi162Scf00102g01741.1 [Petunia axillaris] (13)
| \------------------------100------------------------+
| \----- Peinf101Scf02382g03038.1 [Petunia inflata] (16)
|
| /---------- Niben101Scf02972g00004.1 [Nicotiana benthamiana] (5)
| |
| /-99-+ /----- XP_009768979.1 [Nicotiana sylvestris] (8)
| | \-100+
| /--72-+ \----- XP_016508373.1 [Nicotiana tabacum] (45)
| | |
| | \--------------- Niben101Scf07063g00001.1 [Nicotiana benthamiana] (44)
\-------------------100------------------+
| /----- XP_009604630.1 [Nicotiana tomentosiformis] (41)
\------100------+
\----- XP_016453841.1 [Nicotiana tabacum] (48)
Root part of tree:
/------------------------------------------------------------------- Solyc08g008280.2.1 [Solanum lycopersicum] (1)
|
|------------------------------------------------------------------- Sopim08g008280.0.1 [Solanum pimpinellifolium] (11)
|
| /----------- (122)
| /----99----+
| | \----------- CA01g34460 [Capsicum annuum] (7)
+ /----100---+
| | \---------------------- CA01g34470 [Capsicum annuum] (55)
| /----100----+
| | \--------------------------------- Sme2.5_00013.1_g00025.1 [Solanum melongena] (35)
| /----100---+
| | \--------------------------------------------- PGSC0003DMP400010348 [Solanum tuberosum] (20)
\----100---+
\-------------------------------------------------------- Sopen08g004130.1 [Solanum pennellii] (62)
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