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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA2021
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Subtree rooted at node 106:
/----- XP_016444814.1 [Nicotiana tabacum] (3)
/------100------+
| \----- XP_009628008.1 [Nicotiana tomentosiformis] (43)
|
/-100+ /--------------- Niben101Scf05078g08009.1 [Nicotiana benthamiana] (7)
| | |
| \-100-+ /---------- Niben101Scf01383g07027.1 [Nicotiana benthamiana] (13)
| | |
| \-97-+ /----- XP_009771204.1 [Nicotiana sylvestris] (52)
| \-100+
/-100+ \----- XP_016455000.1 [Nicotiana tabacum] (54)
| |
| | /---------- Sopen11g029710.1 [Solanum pennellii] (9)
| | |
| | /-100+ /----- Solyc11g072060.1.1 [Solanum lycopersicum] (35)
| | | \-100+
/-----------100-----------+ \----100---+ \----- Sopim11g072060.0.1 [Solanum pimpinellifolium] (50)
| | |
| | \--------------- PGSC0003DMP400047694 [Solanum tuberosum] (38)
| |
| | /----- Peaxi162Scf00978g00214.1 [Petunia axillaris] (8)
| \-----------100-----------+
| \----- Peinf101Scf00145g23014.1 [Petunia inflata] (28)
|
| /----- XP_009606602.1 [Nicotiana tomentosiformis] (4)
| /---100---+
| | \----- XP_016504597.1 [Nicotiana tabacum] (55)
| |
| /------100------+ /---------- Niben101Scf00862g01016.1 [Nicotiana benthamiana] (20)
| | | |
| | \-100+ /----- XP_016468034.1 [Nicotiana tabacum] (31)
| | \-100+
| | \----- XP_009762153.1 [Nicotiana sylvestris] (45)
| /-91-+
| | | /-------------------------- CA01g13490 [Capsicum annuum] (19)
| | | |
| | | | /--------------------- Sme2.5_04770.1_g00001.1 [Solanum melongena] (26)
| | \-100+ |
| | | | /----- Sopim01g009070.0.1 [Solanum pimpinellifolium] (33)
/-100+ | | | /-99-+
| | | \-100+ | \----- Solyc01g009070.2.1 [Solanum lycopersicum] (47)
| | /------100------+ | /-100+
| | | | | | \---------- Sopen01g004560.2 [Solanum pennellii] (46)
| | | | \-100-+
| | | | \--------------- PGSC0003DMP400039334 [Solanum tuberosum] (56)
| | | |
| | | | /----- Peinf101Scf01860g00002.1 [Petunia inflata] (10)
| | | | /-57-+
| | | | | \----- Peaxi162Scf00342g00113.1 [Petunia axillaris] (37)
| | | \-----------100-----------+
| | | \---------- Peinf101Ctg12946273g00001.1 [Petunia inflata] (51)
| | |
| | | /---------- Ote100155790051 [Ocimum tenuiflorum] (6)
| | | |
| | | /----100---+ /----- SMil_00007824-RA_Salv [Salvia miltiorrhiza] (34)
| | | | \-91-+
| | | | \----- Ote100021120051 [Ocimum tenuiflorum] (53)
| | | |
| | | | /----- 678410015 [Utricularia gibba] (25)
| | | | /-100+
| | | /-100+ | \----- 678301307 [Utricularia gibba] (30)
| | | | | /-100+
| \-99-+ | | | \---------- EPS59038.1 [Genlisea aurea] (39)
| | | |-100-+
| | | | \--------------- Migut.N02411.1.p [Mimulus guttatus] (49)
| | | |
| | /-93-+ \--------------------- XP_011090254.1 [Sesamum indicum] (40)
| | | |
| | | | /--------------- XP_011080497.1 [Sesamum indicum] (16)
| | | | |
--100+ | | | | /----- KZV52110.1 [Dorcoceras hygrometricum] (18)
| | /-100+ \----98----+ /-100+
| | | | | | \----- KZV44455.1 [Dorcoceras hygrometricum] (29)
| | | | \-100+
| | | | \---------- Ote100157660021 [Ocimum tenuiflorum] (24)
| | /-97-+ |
| | | | \------------------------------- KZV30399.1 [Dorcoceras hygrometricum] (22)
| | | |
| | /-100+ \------------------------------------ DCAR_006329 [Daucus carota] (12)
| | | |
| | | | /----- cra_locus_8899_iso_1 [Catharanthus roseus] (36)
| | | \----------------100----------------+
| | | \----- Cc01_g07440 [Coffea canephora] (42)
| \-100-+
| | /----- Itr_sc002514.1_g00007.1 [Ipomoea trifida] (21)
| | /-97-+
| | | \----- Itr_sc000422.1_g00005.1 [Ipomoea trifida] (58)
| \----------------100----------------+
| \---------- Itr_sc000473.1_g00002.1 [Ipomoea trifida] (41)
|
| /----- XP_009596031.1 [Nicotiana tomentosiformis] (14)
| /-100+
| | \----- XP_016506203.1 [Nicotiana tabacum] (17)
| |
|------------------------100------------------------+---------- Niben101Scf11569g00002.1 [Nicotiana benthamiana] (15)
| |
| | /----- XP_016484620.1 [Nicotiana tabacum] (32)
| \-92-+
| \----- XP_009786742.1 [Nicotiana sylvestris] (48)
|
| /----- Peinf101Scf00302g04018.1 [Petunia inflata] (44)
\---------------------------100--------------------------+
\----- Peaxi162Scf00526g00820.1 [Petunia axillaris] (57)
Root part of tree:
/------------------------------------------------------------------- Sopen06g030050.1 [Solanum pennellii] (1)
|
| /----------------- Sopim06g073640.0.1 [Solanum pimpinellifolium] (5)
|-----------------------100-----------------------+
| \----------------- Solyc06g073640.2.1 [Solanum lycopersicum] (23)
+
| /-------------------------------------------------- PGSC0003DMP400010497 [Solanum tuberosum] (2)
| |
| | /----------------- (106)
\-------100------+ /------100------+
| | \----------------- CA06g22300 [Capsicum annuum] (27)
\-------100------+
\--------------------------------- Sme2.5_01096.1_g00010.1 [Solanum melongena] (11)
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