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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEA598
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 192:
/--------------- cra_locus_16831_iso_1 [Catharanthus roseus] (2)
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| /----- Cc02_g28190 [Coffea canephora] (36)
| /-96-+
| | \----- Cc02_g28210 [Coffea canephora] (84)
|-100+
/--------------62--------------+ \---------- Cc02_g03660 [Coffea canephora] (59)
| |
| | /----- Migut.F00404.1.p [Mimulus guttatus] (40)
| | /-63-+
| | | \----- XP_011076501.1 [Sesamum indicum] (76)
| \-66-+
| \---------- SMil_00015939-RA_Salv [Salvia miltiorrhiza] (69)
|
| /----- Solyc06g035490.2.1 [Solanum lycopersicum] (5)
| /-100+
| | \----- Sopim06g035490.0.1 [Solanum pimpinellifolium] (180)
| /-100+
| | \---------- Sopen06g011230.1 [Solanum pennellii] (20)
| /---100---+
| | | /----- CA06g06440 [Capsicum annuum] (32)
| | \----97---+
| | \----- Sme2.5_00735.1_g00008.1 [Solanum melongena] (74)
| |
| | /----- XP_016452590.1 [Nicotiana tabacum] (8)
| /-100+ /-100+
| | | | \----- XP_009804982.1 [Nicotiana sylvestris] (30)
/-61-+ | | /-78-+
| | | | | \---------- Niben101Scf10974g01004.1 [Nicotiana benthamiana] (140)
| | | | /-100+
| | /-100-+ | | \--------------- Niben101Scf02420g08014.1 [Nicotiana benthamiana] (19)
| | | | \-100+
| | | | \-------------------- XP_009616845.1 [Nicotiana tomentosiformis] (66)
| | | |
| | | | /----- Peinf101Scf00371g03012.1 [Petunia inflata] (13)
| | | \-----------100----------+
| | | \----- Peaxi162Scf01178g00113.1 [Petunia axillaris] (130)
| | |
| | | /---------- Niben101Scf02955g01007.1 [Nicotiana benthamiana] (21)
| | | |
| | /-100+ /-100+ /----- XP_009801444.1 [Nicotiana sylvestris] (64)
| | | | | \-100+
| | | | | \----- XP_016489170.1 [Nicotiana tabacum] (77)
| | | | /-100+
| | | | | | /----- XP_009624566.1 [Nicotiana tomentosiformis] (41)
| | | | | \---100---+
| | | | /-100+ \----- XP_016443890.1 [Nicotiana tabacum] (46)
| \-100+ | | |
| | | | \-------------------- Niben101Scf11805g02005.1 [Nicotiana benthamiana] (42)
| | \----100---+
| | | /----- Peaxi162Scf00192g00715.1 [Petunia axillaris] (37)
/-72-+ | \--------100--------+
| | | \----- Peinf101Scf01452g03021.1 [Petunia inflata] (91)
| | |
| | \----------------------------------------- Itr_sc003191.1_g00002.1 [Ipomoea trifida] (16)
| |
| | /----- Achn233831 [Actinidia chinensis] (4)
| | /-100+
| | | \----- Achn354401 [Actinidia chinensis] (97)
| |-------------------74-------------------+
| | \---------- DCAR_018135 [Daucus carota] (88)
| |
| | /----- Cc08_g13690 [Coffea canephora] (24)
| | /-97-+
| | | \----- Cc08_g13700 [Coffea canephora] (71)
| | /-86-+
| | | \---------- cra_locus_9820_iso_1 [Catharanthus roseus] (57)
| | |
| |-----------------84----------------+--------------- Itr_sc000682.1_g00004.1 [Ipomoea trifida] (27)
| | |
| | | /----- Achn092921 [Actinidia chinensis] (51)
| | \----88---+
| | \----- Achn361761 [Actinidia chinensis] (99)
| |
| | /----- Achn233841 [Actinidia chinensis] (31)
| \---------------------100---------------------+
| \----- Achn354411 [Actinidia chinensis] (53)
|
| /----- SMil_00026150-RA_Salv [Salvia miltiorrhiza] (9)
| /---100---+
| | \----- SMil_00003984-RA_Salv [Salvia miltiorrhiza] (18)
| |
| /-100+ /----- SMil_00026336-RA_Salv [Salvia miltiorrhiza] (65)
| | | /-100+
| | | | \----- SMil_00001369-RA_Salv [Salvia miltiorrhiza] (85)
| | \-100+
| | \---------- SMil_00026151-RA_Salv [Salvia miltiorrhiza] (100)
| /-76-+
| | | /----- XP_011076270.1 [Sesamum indicum] (50)
| | | /-57-+
| | | | \----- XP_011076504.1 [Sesamum indicum] (190)
| | \----91---+
| /-92-+ \---------- XP_011076269.1 [Sesamum indicum] (86)
| | |
| | | /----- Migut.F00405.1.p [Mimulus guttatus] (67)
| | | /-99-+
| | | | \----- Migut.H00770.1.p [Mimulus guttatus] (150)
| | \------100-----+
| | \---------- Migut.F01201.1.p [Mimulus guttatus] (83)
| |
| | /----- XP_011101193.1 [Sesamum indicum] (14)
| | /----74---+
| | | \----- KZV51892.1 [Dorcoceras hygrometricum] (33)
| | |
| | | /---------- XP_011076503.1 [Sesamum indicum] (28)
/-89-+ | | |
| | |------72------+-91-+ /----- SMil_00001370-RA_Salv [Salvia miltiorrhiza] (60)
| | | | \-93-+
| |------------76-----------+ | \----- SMil_00026337-RA_Salv [Salvia miltiorrhiza] (110)
| | | |
| | | \--------------- KZV14558.1 [Dorcoceras hygrometricum] (120)
| | |
| | | /----- SMil_00012209-RA_Salv [Salvia miltiorrhiza] (17)
| | |-----------86-----------+
| | | \----- Ote100278360041 [Ocimum tenuiflorum] (70)
| | |
| | |------------------------------ XP_011076502.1 [Sesamum indicum] (23)
| | |
| | | /----- 678457517 [Utricularia gibba] (48)
| | | /-71-+
| | | | \----- 678311340 [Utricularia gibba] (94)
| | |---------72--------+
| | | \---------- EPS68093.1 [Genlisea aurea] (89)
| | |
| | \------------------------------ cra_locus_58430_iso_1 [Catharanthus roseus] (56)
| |
| | /----- cra_locus_11812_iso_1 [Catharanthus roseus] (10)
| |------------------------87------------------------+
| | \----- Cc02_g03670 [Coffea canephora] (35)
| |
| | /----- XP_009624565.1 [Nicotiana tomentosiformis] (15)
| | /---100---+
| | | \----- XP_016443891.1 [Nicotiana tabacum] (93)
| | |
| | /---100---+ /---------- Niben101Scf02955g02004.1 [Nicotiana benthamiana] (34)
| | | | |
| | | \-73-+ /----- XP_016489167.1 [Nicotiana tabacum] (62)
| | | \-100+
| | | \----- XP_009801441.1 [Nicotiana sylvestris] (90)
| | |
| | | /----- Sopim03g006910.0.1 [Solanum pimpinellifolium] (22)
| | /-100+ /-100+
| | | | | \----- Solyc03g006910.2.1 [Solanum lycopersicum] (25)
| | | | /-100+
| | | | | \---------- Sopen03g002910.1 [Solanum pennellii] (98)
| | | | /-100+
| | | | | \--------------- PGSC0003DMP400013372 [Solanum tuberosum] (170)
--99-+ | | \-100+
| | | | /----- CA00g56330 [Capsicum annuum] (43)
| | | \------68------+
| | | \----- Sme2.5_09905.1_g00002.1 [Solanum melongena] (47)
| | /--95-+
| | | | /----- Niben101Scf02420g07005.1 [Nicotiana benthamiana] (26)
| | | | /-95-+
| | | | | \----- XP_009788923.1 [Nicotiana sylvestris] (81)
| | | | /-92-+
| | | | | | /----- XP_016481890.1 [Nicotiana tabacum] (54)
| | | | | \-100+
| | | | /-99-+ \----- XP_009587651.1 [Nicotiana tomentosiformis] (75)
| \---------69--------+ | | |
| | | | \--------------- PGSC0003DMP400048605 [Solanum tuberosum] (61)
| | \---100---+
| | | /----- Peaxi162Scf01178g00119.1 [Petunia axillaris] (80)
| | \------100-----+
| | \----- Peinf101Scf00371g03016.1 [Petunia inflata] (95)
| |
| | /----- Itr_sc003191.1_g00003.1 [Ipomoea trifida] (44)
| \--------------88--------------+
| \----- Itr_sc000090.1_g00019.1 [Ipomoea trifida] (87)
|
| /---------- Niben101Scf19439g00001.1 [Nicotiana benthamiana] (3)
| |
| | /----- XP_016462319.1 [Nicotiana tabacum] (6)
| |-100+
| /---100---+ \----- XP_009620738.1 [Nicotiana tomentosiformis] (68)
| | |
| | | /----- XP_009757518.1 [Nicotiana sylvestris] (39)
| | \-100+
| /-58-+ \----- XP_016511682.1 [Nicotiana tabacum] (58)
| | |
| | | /--------------- CA03g08260 [Capsicum annuum] (11)
| | | |
| | \-100+ /---------- Sopen09g029650.1 [Solanum pennellii] (92)
| | | |
| /-100+ \-100+ /----- Solyc09g074810.2.1 [Solanum lycopersicum] (96)
| | | \-100+
| | | \----- Sopim09g074810.0.1 [Solanum pimpinellifolium] (160)
| | |
\--------------100-------------+ | /----- Peinf101Scf01201g04021.1 [Petunia inflata] (63)
| \--------100--------+
| \----- Peaxi162Scf00156g00213.1 [Petunia axillaris] (72)
|
\------------------------------ Itr_sc000042.1_g00004.1 [Ipomoea trifida] (45)
Root part of tree:
/------------------------------------------------------------------ Peinf101Scf01201g04022.1 [Petunia inflata] (1)
|
|------------------------------------------------------------------ Peaxi162Scf00156g00023.1 [Petunia axillaris] (38)
|
| /-------------------------------------------- (192)
| |
| | /----------- Sopen04g025470.1 [Solanum pennellii] (12)
+ | /----100---+
| /----97----+ | \----------- PGSC0003DMP400018618 [Solanum tuberosum] (49)
| | | /----96----+
| | | | \---------------------- Sme2.5_02737.1_g00005.1 [Solanum melongena] (29)
| | \----100---+
| | \--------------------------------- CA06g04950 [Capsicum annuum] (73)
| |
\----100---+ /----------- XP_009597785.1 [Nicotiana tomentosiformis] (7)
| /---------------100--------------+
| | \----------- XP_016462318.1 [Nicotiana tabacum] (82)
| |
| | /---------------------- Niben101Scf08573g00005.1 [Nicotiana benthamiana] (52)
\----100---+ |
| /----100---+ /----------- XP_016437313.1 [Nicotiana tabacum] (55)
| | \----100---+
\----98----+ \----------- XP_009801280.1 [Nicotiana sylvestris] (79)
|
\--------------------------------- Niben101Scf06850g00011.1 [Nicotiana benthamiana] (78)
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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