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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEA681
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 177:
/--------------------------------------------------- Itr_sc005173.1_g00002.1 [Ipomoea trifida] (5)
|
| /----- PGSC0003DMP400014817 [Solanum tuberosum] (7)
| /-100+
| | \----- Sopen05g032650.1 [Solanum pennellii] (61)
| /-100+
| | \---------- Sme2.5_05200.1_g00006.1 [Solanum melongena] (12)
| /-100+
| | \--------------- CA05g17900 [Capsicum annuum] (92)
| |
| | /----- XP_016490832.1 [Nicotiana tabacum] (11)
| /-92-+ /---100---+
| | | | \----- XP_009629634.1 [Nicotiana tomentosiformis] (97)
| | | |
| | \-100+ /---------- Niben101Scf02911g07002.1 [Nicotiana benthamiana] (50)
| | | |
| /------100------+ \-82-+ /----- XP_009804066.1 [Nicotiana sylvestris] (87)
| | | \-100+
| | | \----- XP_016451629.1 [Nicotiana tabacum] (88)
| | |
| | | /----- Peaxi162Scf00576g00063.1 [Petunia axillaris] (47)
| | \--------100--------+
| | \----- Peinf101Scf03187g02004.1 [Petunia inflata] (96)
| |
| | /----- Sopim04g014830.0.1 [Solanum pimpinellifolium] (9)
/-99-+ | /-100+
| | | | \----- Solyc04g014830.1.1 [Solanum lycopersicum] (180)
| | | /-100+
| | | | \---------- Sopen04g006960.1 [Solanum pennellii] (53)
| | /-100+ /-100+
| | | | | \--------------- PGSC0003DMP400040771 [Solanum tuberosum] (99)
| | | | /-100+
| | | | | \-------------------- Sme2.5_03957.1_g00007.1 [Solanum melongena] (31)
| | | | /-100+
| | | | | \------------------------- CA05g01670 [Capsicum annuum] (29)
| | | | |
| | | | | /----- XP_016460679.1 [Nicotiana tabacum] (26)
| | | | /--95-+ /---100---+
| | | | | | | \----- XP_009594270.1 [Nicotiana tomentosiformis] (72)
| | | | | | |
| | | | | \------100-----+ /----- XP_009792736.1 [Nicotiana sylvestris] (37)
| | | | | | /-100+
| | | \-100+ | | \----- XP_016448345.1 [Nicotiana tabacum] (150)
| | | | \-100+
| | | | \---------- Niben101Scf02048g00001.1 [Nicotiana benthamiana] (64)
| | | |
| | | | /----- Peinf101Scf01292g05002.1 [Petunia inflata] (39)
| | | \--------------100-------------+
| | | \----- Peaxi162Scf00520g00001.1 [Petunia axillaris] (40)
| \-99-+
| | /----- XP_009773976.1 [Nicotiana sylvestris] (13)
| | /-100+
/-100+ | | \----- XP_016483598.1 [Nicotiana tabacum] (55)
| | | /-86-+
| | | | | /----- Niben101Scf01234g01012.1 [Nicotiana benthamiana] (23)
| | | | \-100+
| | | | \----- Niben101Scf03541g00022.1 [Nicotiana benthamiana] (34)
| | | |
| | | /-69-+ /----- XP_009625296.1 [Nicotiana tomentosiformis] (68)
| | | | |----99---+
| | | | | \----- XP_016487801.1 [Nicotiana tabacum] (110)
| | | /----99---+ |
| | | | | \--------------- Niben101Scf04993g05001.1 [Nicotiana benthamiana] (140)
| | | | |
| | | | \-------------------- Niben101Scf04993g06012.1 [Nicotiana benthamiana] (20)
| | | |
| | | | /---------- Sopen11g007250.1 [Solanum pennellii] (22)
| | | | |
| | \------100------+ /-100+ /----- Sopim11g012510.0.1 [Solanum pimpinellifolium] (33)
| | | | \-100+
| | | /-100+ \----- Solyc11g012510.1.1 [Solanum lycopersicum] (65)
| | | | |
| | | /-100+ \--------------- PGSC0003DMP400023644 [Solanum tuberosum] (86)
| | | | |
| | \-100+ \-------------------- Sme2.5_01424.1_g00007.1 [Solanum melongena] (73)
| | |
| | \------------------------- CA12g00700 [Capsicum annuum] (89)
--97-+ |
| \-------------------------------------------------------- Itr_sc006078.1_g00001.1 [Ipomoea trifida] (35)
|
| /----- SMil_00023920-RA_Salv [Salvia miltiorrhiza] (8)
| /-100+
| | \----- Ote100177760031 [Ocimum tenuiflorum] (120)
| /-100+
| | \---------- Migut.H01617.1.p [Mimulus guttatus] (98)
| /----86---+
| | \--------------- XP_011086251.1 [Sesamum indicum] (100)
| |
| | /---------- 678417385 [Utricularia gibba] (17)
| | |
| | /-100+ /----- EPS70356.1 [Genlisea aurea] (70)
| /-78-+ | \-99-+
| | | /-84-+ \----- 678464754 [Utricularia gibba] (76)
| | | | |
| | | | \--------------- XP_011095941.1 [Sesamum indicum] (71)
| | | |
| | \-99-+ /----- Ote100005680061 [Ocimum tenuiflorum] (49)
| /-100-+ | /-100+
| | | | | \----- SMil_00022108-RA_Salv [Salvia miltiorrhiza] (82)
| | | \----86---+
| | | \---------- Migut.M01421.1.p [Mimulus guttatus] (95)
| | |
\-----------95-----------+ | /----- KZV41449.1 [Dorcoceras hygrometricum] (30)
| \-----------66-----------+
| \----- KZV51240.1 [Dorcoceras hygrometricum] (42)
|
| /----- Cc09_g00640 [Coffea canephora] (75)
\--------------100-------------+
\----- cra_locus_1993_iso_1 [Catharanthus roseus] (170)
Subtree rooted at node 200:
/---------- (177)
|
/-85-+ /----- Achn341111 [Actinidia chinensis] (10)
| \-100+
| \----- Achn142571 [Actinidia chinensis] (160)
/---------------------100---------------------+
| | /----- DCAR_004891 [Daucus carota] (45)
| \---100---+
| \----- DCAR_027820 [Daucus carota] (85)
|
| /----- Achn332821 [Actinidia chinensis] (6)
| /------------------------100-----------------------+
| | \----- Achn305931 [Actinidia chinensis] (25)
| |
| | /---------- Sopen07g033480.1 [Solanum pennellii] (15)
| | |
| | /-100+ /----- Solyc07g065270.1.1 [Solanum lycopersicum] (67)
--100+ | | \-100+
| | /-100+ \----- Sopim07g065270.0.1 [Solanum pimpinellifolium] (94)
| | | |
| | /-100+ \--------------- PGSC0003DMP400038400 [Solanum tuberosum] (36)
| | | |
| | /-100+ \-------------------- Sme2.5_00100.1_g00011.1 [Solanum melongena] (90)
| | | |
| | | \------------------------- CA07g20170 [Capsicum annuum] (84)
| | |
| | /--78-+ /----- XP_016475371.1 [Nicotiana tabacum] (44)
| | | | /---100---+
\-100+ | | | \----- XP_009626207.1 [Nicotiana tomentosiformis] (81)
| | | |
| | \------100-----+ /---------- Niben101Scf08811g00005.1 [Nicotiana benthamiana] (54)
| | | |
| | | | /----- XP_016487146.1 [Nicotiana tabacum] (57)
| /-100+ \-100+-100+
| | | | \----- XP_009804325.1 [Nicotiana sylvestris] (69)
| | | |
| | | \---------- Niben101Scf00683g00016.1 [Nicotiana benthamiana] (58)
| | |
| /-100+ | /----- Peinf101Scf00022g02006.1 [Petunia inflata] (16)
| | | \--------------100-------------+
| | | \----- Peaxi162Scf00285g00084.1 [Petunia axillaris] (62)
| /-72-+ |
| | | \----------------------------------------- Itr_sc000349.1_g00015.1 [Ipomoea trifida] (46)
| | |
\-68-+ \---------------------------------------------- XP_011097791.1 [Sesamum indicum] (190)
|
| /----- DCAR_017092 [Daucus carota] (52)
\---------------------100---------------------+
\----- DCAR_013212 [Daucus carota] (91)
Subtree rooted at node 213:
/---------- XP_016485416.1 [Nicotiana tabacum] (2)
|
/-100+ /----- XP_009590821.1 [Nicotiana tomentosiformis] (18)
| \-100+
/-90-+ \----- XP_016510453.1 [Nicotiana tabacum] (28)
| |
/-----------100-----------+ \--------------- XP_009761823.1 [Nicotiana sylvestris] (66)
| |
| \-------------------- Niben101Scf01943g11007.1 [Nicotiana benthamiana] (38)
|
| /----- cra_locus_10464_iso_1 [Catharanthus roseus] (3)
| /-----------100----------+
| | \----- Cc00_g06820 [Coffea canephora] (130)
| |
| | /------------------------- KZV31351.1 [Dorcoceras hygrometricum] (24)
| /--97-+ |
| | | | /----- Ote100032450011 [Ocimum tenuiflorum] (41)
/-100+ | | | /-100+
| | | | | | \----- Ote100263640041 [Ocimum tenuiflorum] (111)
| | | \-100+ /-100+
| | | | | \---------- SMil_00020530-RA_Salv [Salvia miltiorrhiza] (110)
| | | | /-100+
| | /-69-+ | | \--------------- Migut.M00028.1.p [Mimulus guttatus] (93)
| | | | \-100+
| | | | \-------------------- XP_011100624.1 [Sesamum indicum] (74)
| | | |
| | | | /---------- Itr_sc000168.1_g00012.1 [Ipomoea trifida] (4)
| | | | |
/-100+ \-100+ \------------55-----------+ /----- Itr_sc000041.1_g00016.1 [Ipomoea trifida] (27)
| | | \-89-+
| | | \----- Itr_sc000110.1_g00021.1 [Ipomoea trifida] (77)
| | |
| | | /---------- (200)
| | | |
| | \--------------100-------------+ /----- Achn052901 [Actinidia chinensis] (51)
| | \-82-+
| | \----- DCAR_021107 [Daucus carota] (80)
| |
/-100+ | /----- Peinf101Scf03171g03003.1 [Petunia inflata] (21)
| | \---------------------100---------------------+
| | \----- Peaxi162Scf00776g00311.1 [Petunia axillaris] (83)
| |
| | /----- Niben101Scf10048g00002.1 [Nicotiana benthamiana] (14)
| | /-56-+
| | | \----- Niben101Scf25596g00004.1 [Nicotiana benthamiana] (19)
| | /-99-+
--100+ | | | /----- XP_009784447.1 [Nicotiana sylvestris] (32)
| | | \-100+
| \-------------------100------------------+ \----- XP_016458356.1 [Nicotiana tabacum] (60)
| |
| | /----- XP_009605526.1 [Nicotiana tomentosiformis] (48)
| \---100---+
| \----- XP_016478621.1 [Nicotiana tabacum] (79)
|
\------------------------------------------------------------- CA07g10940 [Capsicum annuum] (78)
Root part of tree:
/------------------------------------------------------------------ Solyc07g047950.1.1 [Solanum lycopersicum] (1)
|
|------------------------------------------------------------------ Sopim07g047950.0.1 [Solanum pimpinellifolium] (56)
|
| /---------------- (213)
+ /-------100------+
| | \---------------- Sme2.5_02954.1_g00005.1 [Solanum melongena] (43)
| /------100------+
| | \--------------------------------- PGSC0003DMP400010871 [Solanum tuberosum] (63)
\-------100------+
\------------------------------------------------- Sopen07g024380.1 [Solanum pennellii] (59)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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