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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA860
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Subtree rooted at node 157:
/----- Itr_sc001447.1_g00001.1 [Ipomoea trifida] (2)
/-93-+
| \----- Itr_sc000881.1_g00001.1 [Ipomoea trifida] (20)
/--------------------83-------------------+
| \---------- cra_locus_13647_iso_1 [Catharanthus roseus] (65)
|
| /----- Peinf101Scf00140g06006.1 [Petunia inflata] (4)
| /------100------+
| | \----- Peaxi162Scf00859g00037.1 [Petunia axillaris] (73)
| |
| | /----- XP_016462078.1 [Nicotiana tabacum] (11)
| /-65-+ /-100+
| | | | \----- XP_009802434.1 [Nicotiana sylvestris] (13)
| | | /-99-+
| | | | \---------- Niben101Scf27908g01002.1 [Nicotiana benthamiana] (55)
| | \-100-+
| | | /----- XP_009617305.1 [Nicotiana tomentosiformis] (56)
| | \---100---+
| | \----- XP_016437700.1 [Nicotiana tabacum] (62)
| /----89---+
| | | /--------------- PGSC0003DMP400009023 [Solanum tuberosum] (25)
| | | |
| | | | /----- Solyc03g031450.2.1 [Solanum lycopersicum] (48)
| | | /-100-+ /-100+
| | | | | | \----- Sopim03g031450.0.1 [Solanum pimpinellifolium] (75)
| | | | \-100+
| | \-99-+ \---------- Sopen03g005340.1 [Solanum pennellii] (77)
| | |
| | \--------------------- CA04g02940 [Capsicum annuum] (61)
| /-76-+
| | | /----- Peaxi162Scf01306g00019.1 [Petunia axillaris] (5)
| | | /-----------100-----------+
| | | | \----- Peinf101Scf00634g07008.1 [Petunia inflata] (24)
| | | |
| | | | /----- XP_009629262.1 [Nicotiana tomentosiformis] (9)
| | | | /---100---+
| | | | | \----- XP_016488925.1 [Nicotiana tabacum] (53)
| | | | |
| | | | /----100---+ /----- Niben101Scf04991g00003.1 [Nicotiana benthamiana] (18)
| | \-100+ | | /-64-+
| | | | | | \----- Niben101Scf02440g00004.1 [Nicotiana benthamiana] (83)
| | | | \-100+
| | | | | /----- XP_009764035.1 [Nicotiana sylvestris] (68)
| | | | \-100+
| /-59-+ | | \----- XP_016490372.1 [Nicotiana tabacum] (86)
| | | | |
| | | \-54-+ /----- Solyc02g079760.2.1 [Solanum lycopersicum] (31)
| | | | /-100+
| | | | | \----- Sopen02g024530.1 [Solanum pennellii] (37)
| | | | /-100+
| | | | | \---------- PGSC0003DMP400024469 [Solanum tuberosum] (33)
| | | | /-100-+
| | | | | \--------------- Sme2.5_10236.1_g00005.1 [Solanum melongena] (78)
| | | \-100+
| | | \--------------------- CA02g17470 [Capsicum annuum] (69)
| | |
| | | /----- Itr_sc001239.1_g00007.1 [Ipomoea trifida] (10)
| | | |
| | \-----------------60----------------+----- Itr_sc001502.1_g00002.1 [Ipomoea trifida] (82)
| | |
| | \----- 678426187 [Utricularia gibba] (85)
/-60-+ |
| | | /----- DCAR_008102 [Daucus carota] (12)
| | |-------------------100------------------+
| | | \----- DCAR_004166 [Daucus carota] (44)
| | |
| | | /----- Ote100222520021 [Ocimum tenuiflorum] (16)
| | | /-98-+
| |--79-+ | \----- Ote100266660081 [Ocimum tenuiflorum] (47)
| | | /-100+
| | | | \---------- SMil_00021379-RA_Salv [Salvia miltiorrhiza] (63)
| | | /--72-+
| | | | \--------------- XP_011086152.1 [Sesamum indicum] (40)
| | | /-81-+
| | | | \--------------------- Migut.H01539.1.p [Mimulus guttatus] (72)
| | | |
| | | /-95-+ /----- Migut.M01246.1.p [Mimulus guttatus] (38)
| | | | | /-100+
| | | | | | \----- SMil_00011237-RA_Salv [Salvia miltiorrhiza] (71)
| | | | \-------69------+
| | |------99------+ \---------- XP_011096171.1 [Sesamum indicum] (74)
| | | |
| | | | /----- KZV55191.1 [Dorcoceras hygrometricum] (22)
| | | \------------99-----------+
| | | \----- KZV24654.1 [Dorcoceras hygrometricum] (80)
| | |
| | | /----- cra_locus_13883_iso_3 [Catharanthus roseus] (41)
| | |-------------------100------------------+
| | | \----- Cc02_g11950 [Coffea canephora] (66)
| | |
| | | /----- Achn111891 [Actinidia chinensis] (57)
| | \-------------------100------------------+
| | \----- Achn030801 [Actinidia chinensis] (67)
| |
| | /---------- XP_011097951.1 [Sesamum indicum] (6)
| | |
| | /-70-+ /----- SMil_00023539-RA_Salv [Salvia miltiorrhiza] (23)
| | | \-71-+
| | | \----- Migut.H01880.1.p [Mimulus guttatus] (58)
| | |
| | /--80-+ /----- Migut.M01838.1.p [Mimulus guttatus] (19)
| | | |----64---+
| | | | \----- XP_011095780.1 [Sesamum indicum] (51)
/-100+ | /-81-+ |
| | | | | \--------------- KZV55966.1 [Dorcoceras hygrometricum] (43)
| | | | |
| | | | \--------------------- 678385837 [Utricularia gibba] (52)
| | |------------81-----------+
| | | | /----- Achn177031 [Actinidia chinensis] (17)
| | | | /-100+
| | | | | \----- Achn177021 [Actinidia chinensis] (49)
| | | \------100------+
| | | \---------- Achn379311 [Actinidia chinensis] (79)
| | |
| | | /----- DCAR_022499 [Daucus carota] (27)
| | |----------------------100---------------------+
| | | \----- DCAR_010002 [Daucus carota] (54)
| | |
| | \---------------------------------------------------- Cc05_g12920 [Coffea canephora] (64)
| |
| | /----- Solyc10g006640.2.1 [Solanum lycopersicum] (3)
| | /-99-+
| | | \----- Sopim10g006640.0.1 [Solanum pimpinellifolium] (45)
| | /-100+
| | | \---------- Sopen10g002570.1 [Solanum pennellii] (34)
| | /--98-+
| | | \--------------- PGSC0003DMP400043421 [Solanum tuberosum] (36)
| | /-95-+
--100+ | | | /----- Sme2.5_04102.1_g00014.1 [Solanum melongena] (50)
| | | \-------95------+
| | | \----- CA10g00260 [Capsicum annuum] (60)
| | |
| |--------------80--------------+ /----- XP_016486152.1 [Nicotiana tabacum] (26)
| | | /---100---+
| | | | \----- XP_009594898.1 [Nicotiana tomentosiformis] (30)
| | | |
| | \----100---+ /----- XP_009790944.1 [Nicotiana sylvestris] (29)
| | | /-100+
| | | | \----- XP_016493741.1 [Nicotiana tabacum] (32)
| | \-100+
| | \---------- Niben101Scf00578g04002.1 [Nicotiana benthamiana] (76)
| |
| | /----- EPS67749.1 [Genlisea aurea] (14)
| | /-60-+
| | | \----- EPS73915.1 [Genlisea aurea] (28)
| \----------------------54----------------------+
| \---------- Achn357141 [Actinidia chinensis] (42)
|
| /----- Peaxi162Scf01574g00026.1 [Petunia axillaris] (7)
| /---------100--------+
| | \----- Peinf101Scf01175g06020.1 [Petunia inflata] (84)
| |
| | /----- XP_009617831.1 [Nicotiana tomentosiformis] (15)
\-----------------97----------------+ /------100------+
| | \----- XP_016453648.1 [Nicotiana tabacum] (39)
| |
| | /---------- Niben101Scf05413g05003.1 [Nicotiana benthamiana] (35)
\-100+ |
| /-100+ /----- XP_009803615.1 [Nicotiana sylvestris] (59)
| | \-100+
\-100-+ \----- XP_016514446.1 [Nicotiana tabacum] (81)
|
\--------------- Niben101Scf00253g01016.1 [Nicotiana benthamiana] (46)
Root part of tree:
/------------------------------------------------------------------- Sopim07g063830.0.1 [Solanum pimpinellifolium] (1)
|
|------------------------------------------------------------------- Solyc07g063830.2.1 [Solanum lycopersicum] (21)
|
+ /---------------------- (157)
| /----------100---------+
| | \---------------------- PGSC0003DMP400033417 [Solanum tuberosum] (70)
\---------100---------+
\--------------------------------------------- Sopen07g031930.1 [Solanum pennellii] (8)
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