![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEF534
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 183:
/------------------------------ Lj5g3v2258490.1 [Lotus japonicus] (2)
|
| /----- Tp57577_TGAC_v2_mRNA1462 [Trifolium pratense] (6)
| /---100---+
| | \----- Tp57577_TGAC_v2_mRNA33537 [Trifolium pratense] (89)
| |
| /-59-+ /----- Medtr6g005440.1 [Medicago truncatula] (15)
/--89-+ | | /-100+
| | | | | \----- Medtr6g005450.1 [Medicago truncatula] (73)
| | | \-100+
| | /-100+ | /----- Medtr6g018920.1 [Medicago truncatula] (46)
| | | | \-97-+
| | | | \----- Medtr1g114730.1 [Medicago truncatula] (81)
| \-100+ |
| | \-------------------- XP_004516685.1 [Cicer arietinum] (35)
| |
| \------------------------- Tp57577_TGAC_v2_mRNA27308 [Trifolium pratense] (60)
|
| /----- KHN12465.1 [Glycine soja] (3)
| /---100---+
/------100-----+ | \----- Glyma.08G095500.1.p [Glycine max] (28)
| | |
| | /-100+ /----- Glyma.05G140000.1.p [Glycine max] (27)
| | | | /-100+
| | | | | \----- KHN46085.1 [Glycine soja] (91)
| | | \-99-+
| | | | /----- Glyma.08G095300.1.p [Glycine max] (95)
| | /-80-+ \-100+
| | | | \----- KHN12467.1 [Glycine soja] (97)
| | | |
| | | | /----- C.cajan_12868 [Cajanus cajan] (4)
| | | \------100-----+
| \----100---+ \----- C.cajan_22975 [Cajanus cajan] (5)
| |
| | /----- Vang0062ss00080.1 [Vigna angularis] (52)
| | /-100+
| | | \----- Vradi07g08850.1 [Vigna radiata] (120)
| \------100-----+
| \---------- Phvul.002G183400.1 [Phaseolus vulgaris] (110)
|
| /---------- SapurV1A.0217s0080.1.p [Salix purpurea] (11)
| |
| /---100---+ /----- CCG003733.1 [Populus euphratica] (79)
| | \-100+
| | \----- Potri.001G214900.1 [Populus trichocarpa] (85)
| |
| | /----- Manes.03G020700.1.p [Manihot esculenta] (20)
| /-100+ /-100+
| | | | \----- Manes.16G116000.1.p [Manihot esculenta] (49)
| | | /-98-+
| | | | \---------- 29912.m005524 [Ricinus communis] (42)
| /-100+ \-100+
| | | \--------------- Jcr4S00021.60 [Jatropha curcas] (98)
| | |
| | | /----- WALNUT_00030812-RA [Juglans regia] (29)
| /--68-+ \--------100--------+
| | | \----- augustus_masked-scaffold09320-abinit-gene-0.0-mRNA-1 [Castanea mollissima] (39)
| | |
| | | /----- XP_015880028.1 [Ziziphus jujuba] (23)
/-100+ | \-----------100----------+
| | /-69-+ \----- XP_015888368.1 [Ziziphus jujuba] (69)
| | | |
| | | | /----- augustus_masked-scaffold01482-abinit-gene-0.3-mRNA-1 [Castanea mollissima] (87)
| | | | /-100+
| | | | | \----- augustus_masked-scaffold02353-abinit-gene-0.1-mRNA-1 [Castanea mollissima] (111)
| | | \------------78-----------+
| | | \---------- WALNUT_00001339-RA [Juglans regia] (190)
| | |
| | | /----- XP_008232276.2 [Prunus mume] (21)
| | | /--------100--------+
| | | | \----- Prupe.2G110900.1.p [Prunus persica] (45)
| | | |
| | /-62-+ | /----- Pbr032195.1 [Pyrus bretschneideri] (24)
| | | | | /-100+
| | | | | | \----- Pbr037101.1 [Pyrus bretschneideri] (53)
| | | | | /-100+
| | | | /-100+ | \---------- MDP0000753870 [Malus domestica] (43)
| | | | | | |
| | | | | | /-74-+ /---------- MDP0000123808 [Malus domestica] (26)
| | | | | | | | |
| | | | | | | \-72-+ /----- Pbr022939.1 [Pyrus bretschneideri] (67)
| | | | | | | \-100+
| | | | | \-53-+ \----- MDP0000309181 [Malus domestica] (92)
| | | \----95----+ |
| | | | | /----- Prupe.3G148900.1.p [Prunus persica] (40)
| | | | \------100-----+
| | | | \----- XP_008229316.1 [Prunus mume] (96)
| | | |
| | | | /----- mrna11233.1-v1.0-hybrid [Fragaria vesca] (50)
| | | \-----------100----------+
| | | \----- FANhyb_rscf00000038.1.g00016.1 [Fragaria x ananassa] (72)
| | |
| | | /--------------- Cla005712 [Citrullus lanatus] (12)
| | | |
| | | | /----- Cucsa.228450.1 [Cucumis sativus] (25)
| | | /-63-+ /-98-+
| | | | | | \----- MELO3C023227P1 [Cucumis melo] (47)
| \-99-+ | \-100+
| | | \---------- Cla007823 [Citrullus lanatus] (66)
| | |
| | /----57---+ /----- MDP0000296123 [Malus domestica] (36)
| | | | /-100+
/-59-+ | | | | \----- MDP0000664841 [Malus domestica] (84)
| | | | | /-100+
| | | | | | \---------- Prupe.3G306000.1.p [Prunus persica] (78)
| | | | \-100+
| | | | \--------------- FANhyb_rscf00000030.1.g00023.1 [Fragaria x ananassa] (71)
| | | |
| | | | /----- Potri.002G255700.1 [Populus trichocarpa] (18)
| | | | /-97-+
| | | | | \----- CCG027026.1 [Populus euphratica] (160)
| | | | |
| | | | /-100+---------- CCG031247.1 [Populus euphratica] (31)
| | | | | |
| | | | /-100+ \---------- Potri.012G109900.1 [Populus trichocarpa] (59)
| | | | | |
| | | | | \--------------- SapurV1A.0252s0210.1.p [Salix purpurea] (94)
| | | | |
| | | | /-100+ /----- Potri.001G329800.1 [Populus trichocarpa] (19)
| | | | | | /-100+
| | | | | | | \----- CCG021441.1 [Populus euphratica] (22)
| | \-------53------+ | \---100---+
| | | | \---------- SapurV1A.0278s0250.1.p [Salix purpurea] (70)
| | | |
| | | | /----- Lus10014095 [Linum usitatissimum] (41)
| | | | /-100+
--99-+ | | | | \----- Lus10019819 [Linum usitatissimum] (99)
| | |-99-+------100-----+
| | | | | /----- Lus10007371 [Linum usitatissimum] (44)
| | | | \-100+
| | | | \----- Lus10020789 [Linum usitatissimum] (74)
| | | |
| | | | /----- Manes.15G190500.1.p [Manihot esculenta] (65)
| | | | /-100+
| | | | | \----- Manes.15G161100.1.p [Manihot esculenta] (88)
| | | \------100-----+
| | | | /----- Jcr4S06476.10 [Jatropha curcas] (76)
| | | \-100+
| | | \----- 30190.m010925 [Ricinus communis] (100)
| | |
| | |------------------------------ Jcr4S09416.30 [Jatropha curcas] (57)
| | |
| | \------------------------------ XP_010108895.1 [Morus notabilis] (130)
| |
| \-------------------------------------------------------- Araip.ATU0E [Arachis ipaensis] (8)
|
| /----- KHN40733.1 [Glycine soja] (10)
| /----92---+
| | \----- C.cajan_42409 [Cajanus cajan] (63)
| |
\---------------------100---------------------+ /---------- Phvul.009G213800.1 [Phaseolus vulgaris] (55)
| |
\-100+ /----- Vradi05g03520.1 [Vigna radiata] (61)
\-100+
\----- Vang09g05450.1 [Vigna angularis] (82)
Subtree rooted at node 208:
/------------------------------------ (183)
|
| /--------------- Tp57577_TGAC_v2_mRNA29943 [Trifolium pratense] (9)
| |
| /-100+ /---------- Tp57577_TGAC_v2_mRNA1917 [Trifolium pratense] (38)
| | | |
| | \-100+ /----- Tp57577_TGAC_v2_mRNA1915 [Trifolium pratense] (51)
| /-100+ \-82-+
| | | \----- Tp57577_TGAC_v2_mRNA7596 [Trifolium pratense] (140)
| | |
| | \-------------------- Tp57577_TGAC_v2_mRNA24508 [Trifolium pratense] (62)
| |
| /-80-+ /---------- XP_004490182.1 [Cicer arietinum] (14)
| | | |
| | | /-100+ /----- XP_004508828.1 [Cicer arietinum] (32)
/-96-+ | | | \-79-+
| | | \---100---+ \----- XP_004489898.2 [Cicer arietinum] (83)
| | | |
| | | \--------------- Medtr4g107170.1 [Medicago truncatula] (77)
| |-100-+
| | | /----- XP_004488297.1 [Cicer arietinum] (33)
| | | /-100+
| | | | \----- XP_004488298.1 [Cicer arietinum] (180)
| | | /-100+
/-86-+ | | | \---------- XP_004488302.1 [Cicer arietinum] (48)
| | | \------65------+
| | | \--------------- Medtr2g049610.1 [Medicago truncatula] (68)
| | |
| | | /----- Lj0g3v0294569.1 [Lotus japonicus] (16)
| | \--------------100-------------+
| | \----- Lj0g3v0294559.1 [Lotus japonicus] (56)
| |
/-95-+ \----------------------------------------- C.cajan_34456 [Cajanus cajan] (30)
| |
| | /----- KHN01327.1 [Glycine soja] (34)
| | /-100+
| | | \----- Glyma.07G030200.1.p [Glycine max] (37)
/-52-+ | /-100+
| | | | \---------- Glyma.08G212700.1.p [Glycine max] (58)
| | \--------------100-------------+
| | \--------------- C.cajan_00220 [Cajanus cajan] (150)
| |
/-100+ \--------------------------------------------------- Glyma.19G047500.1.p [Glycine max] (110)
| |
| | /----- KHN31580.1 [Glycine soja] (17)
| | /-100+
| | | \----- Glyma.19G045900.1.p [Glycine max] (80)
--100+ \---------------------100---------------------+
| | /----- KHN47673.1 [Glycine soja] (75)
| \-100+
| \----- Glyma.13G045500.1.p [Glycine max] (170)
|
\------------------------------------------------------------- Vang0053ss00150.1 [Vigna angularis] (54)
Root part of tree:
/------------------------------------------------------------------ Phvul.004G061100.1 [Phaseolus vulgaris] (1)
|
| /------------------------------------------------- (208)
| |
| | /---------------- Phvul.004G061600.1 [Phaseolus vulgaris] (13)
|-------100------+ /-------100------+
| | | \---------------- Phvul.004G061300.1 [Phaseolus vulgaris] (86)
+ \-------55------+
| \--------------------------------- Phvul.004G061500.1 [Phaseolus vulgaris] (90)
|
| /---------------- Phvul.004G061000.1 [Phaseolus vulgaris] (7)
| /-------50-------+
| | \---------------- Phvul.004G060500.1 [Phaseolus vulgaris] (93)
\---------------77---------------+
\--------------------------------- Phvul.004G060900.1 [Phaseolus vulgaris] (64)
|




