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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1124
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 172:
/----- Gorai.013G039800.1 [Gossypium raimondii] (3)
/-100+
| \----- Cotton_A_19408_BGI-A2_v1.0 [Gossypium arboreum] (19)
/-100+
| \---------- Gh_D13G0362 [Gossypium hirsutum] (4)
/-100+
| \--------------- Gh_A13G0323 [Gossypium hirsutum] (35)
/-99-+
| \-------------------- Cotton_A_19409_BGI-A2_v1.0 [Gossypium arboreum] (69)
/-100+
| \------------------------- Gorai.013G040000.1 [Gossypium raimondii] (8)
|
| /---------- Gh_D01G0054 [Gossypium hirsutum] (5)
| |
| | /----- Cotton_A_00210_BGI-A2_v1.0 [Gossypium arboreum] (78)
|--------100--------+-96-+
| | \----- Gh_A01G0054 [Gossypium hirsutum] (88)
| |
| \---------- Gorai.002G006500.1 [Gossypium raimondii] (82)
|
/--87-+ /----- Gh_A03G1696 [Gossypium hirsutum] (17)
| | /-100+
| | | \----- Cotton_A_00771_BGI-A2_v1.0 [Gossypium arboreum] (32)
| |--------100--------+
| | | /----- Gh_D02G2117 [Gossypium hirsutum] (33)
| | \-100+
| | \----- Gorai.005G240900.1 [Gossypium raimondii] (51)
| |
/-63-+ | /----- Cotton_A_32643_BGI-A2_v1.0 [Gossypium arboreum] (22)
| | | /-98-+
| | | | \----- Gh_A04G1445 [Gossypium hirsutum] (49)
| | \--------100--------+
| | | /----- Gorai.012G150900.1 [Gossypium raimondii] (26)
/-100+ | \-100+
| | | \----- Gh_D04G1599 [Gossypium hirsutum] (86)
| | |
| | \------------------------------------ Thecc1EG006971t2 [Theobroma cacao] (43)
| |
| \----------------------------------------- Thecc1EG037983t1 [Theobroma cacao] (31)
|
| /----- Cotton_A_32642_BGI-A2_v1.0 [Gossypium arboreum] (15)
| /-100+
| | \----- Gh_A04G1446 [Gossypium hirsutum] (57)
| /-100+
| | | /----- Gorai.012G151000.1 [Gossypium raimondii] (92)
| | \-100+
| | \----- Gh_D04G1600 [Gossypium hirsutum] (96)
| |
| /-80-+ /----- Gorai.013G039700.1 [Gossypium raimondii] (39)
| | | |
| | | /-58-+----- Gh_D13G0361 [Gossypium hirsutum] (47)
| | | | |
| | \-100+ \----- Gh_A13G0322 [Gossypium hirsutum] (91)
| /-100+ |
| | | \---------- Cotton_A_19407_BGI-A2_v1.0 [Gossypium arboreum] (99)
| | |
| | | /----- Thecc1EG006968t1 [Theobroma cacao] (40)
| | \------100-----+
/-97-+ | \----- Thecc1EG006969t1 [Theobroma cacao] (59)
| | |
| | | /----- orange1.1g017237m [Citrus sinensis] (16)
| | /-99-+ /-100+
| | | | | \----- Ciclev10028501m [Citrus clementina] (81)
| | | | /-100+
| | | | | | /----- Ciclev10028984m [Citrus clementina] (36)
| | | | | \-100+
| | | | /-91-+ \----- orange1.1g041048m [Citrus sinensis] (73)
| | | | | |
| | /--96-+ \-82-+ \--------------- Eucgr.H02901.1.p [Eucalyptus grandis] (54)
| | | | |
| | | | \-------------------- evm.model.supercontig_62.78 [Carica papaya] (21)
| | | |
| | | | /----- Neem_11775_f_3 [Azadirachta indica] (18)
| | | | /-100+
| | | | | \----- Neem_24270_f_3 [Azadirachta indica] (93)
/-95-+ | | \---------95--------+
| | | /-94-+ | /----- Neem_7709_f_2 [Azadirachta indica] (44)
| | | | | \-100+
| | | | | \----- Neem_26861_f_1 [Azadirachta indica] (95)
| | | | |
| | | | | /----- EcS662948.10 [Eucalyptus camaldulensis] (45)
| | | | | /-51-+
| | | | | | \----- Eucgr.G01517.1.p [Eucalyptus grandis] (65)
| | \-93-+ | |
| | | \-----------100-----------+---------- EcS783656.10 [Eucalyptus camaldulensis] (53)
/-95-+ | | |
| | | | \---------- EcS632340.10 [Eucalyptus camaldulensis] (98)
| | | |
| | | | /----- Ciclev10028642m [Citrus clementina] (58)
| | | \----------------100----------------+
| | | \----- orange1.1g016655m [Citrus sinensis] (61)
| | |
| | \--------------------------------------------------- evm.model.supercontig_62.76 [Carica papaya] (68)
| |
| | /----- XP_010519311.1 [Tarenaya hassleriana] (14)
| \------------------------99------------------------+
| \----- XP_010532431.1 [Tarenaya hassleriana] (70)
|
| /----- Cagra.4084s0003.1.p [Capsella grandiflora] (6)
| /---100---+
| | \----- Carubv10010224m [Capsella rubella] (46)
| |
| /-100+ /----- Csa14g055690.1 [Camelina sativa] (29)
| | | /-100+
| | | | \----- Csa03g055350.1 [Camelina sativa] (85)
| /-100+ \-98-+
| | | \---------- Csa17g083190.1 [Camelina sativa] (48)
| | |
| /-58-+ \-------------------- Bostr.26675s0223.1.p [Boechera stricta] (55)
| | |
| | | /----- Araha.9032s0004.1.p [Arabidopsis halleri] (41)
| /----100---+ \---------53--------+
--95-+ | | \----- 891847 [Arabidopsis lyrata] (67)
| | |
| | \------------------------------ AT1G49480.1 [Arabidopsis thaliana] (100)
| |
| | /----- XP_009107297.1 [Brassica rapa] (7)
| | /-99-+
| | | \----- GSBRNA2T00091101001 [Brassica napus] (60)
| | /-61-+
| | | | /----- GSBRNA2T00073552001 [Brassica napus] (9)
| | | \-100+
| | /-100+ \----- XP_013604041.1 [Brassica oleracea] (75)
| | | |
| | | | /----- Rsa1.0_03884.1_g00004.1 [Raphanus sativus] (62)
| | /-81-+ \---100---+
| | | | \----- RrC19093_p1 [Raphanus raphanistrum] (66)
| /-100+ | |
| | | | \-------------------- 676782660 [Sisymbrium irio] (52)
| | | |
| | | | /---------- XP_013638010.1 [Brassica oleracea] (10)
| | | | |
| | | /-100+ |---------- GSBRNA2T00025755001 [Brassica napus] (37)
| | | | | /-99-+
| | | | | | | /----- GSBRNA2T00042915001 [Brassica napus] (89)
| | | | | | \-100+
| | | | | /-100+ \----- XP_009144977.1 [Brassica rapa] (120)
| | | | | | |
\------100-----+ | /-100-+ | | | /----- RrC8235_p2 [Raphanus raphanistrum] (24)
| | | | \-100+ \---100---+
| | | | | \----- Rsa1.0_18666.1_g00001.1 [Raphanus sativus] (56)
| | | | |
| \-99-+ | \-------------------- Tp1g36320 [Thellungiella parvula] (84)
| | |
| | \------------------------------ Thhalv10012062m [Eutrema salsugineum] (77)
| |
| \------------------------------------ KFK36008.1 [Arabis alpina] (28)
|
\---------------------------------------------- AA2G00082 [Aethionema arabicum] (83)
Root part of tree:
/------------------------------------------------------------------ RrC1952_p2 [Raphanus raphanistrum] (1)
|
| /---------------- XP_013587606.1 [Brassica oleracea] (42)
| |
| | /-------- XP_009145836.1 [Brassica rapa] (71)
|-----------------------100-----------------------+--100--+
| | \-------- GSBRNA2T00154017001 [Brassica napus] (80)
| |
| \---------------- GSBRNA2T00107563001 [Brassica napus] (90)
|
| /----------------------------------------- Tp3g17090 [Thellungiella parvula] (2)
| |
| | /-------- (172)
| | /---61--+
| | | \-------- Csa15g026650.1 [Camelina sativa] (76)
| /---57--+ /---61---+
| | | | \---------------- Csa19g026440.1 [Camelina sativa] (50)
| | | /---61--+
+ | | | | /-------- Carubv10015637m [Capsella rubella] (20)
| | | | \-------100------+
| | \---61--+ \-------- Cagra.5105s0003.1.p [Capsella grandiflora] (72)
| | |
| | \--------------------------------- Bostr.19424s0762.1.p [Boechera stricta] (25)
| |
| /---98---+ /-------- KFK39227.1 [Arabis alpina] (12)
| | |-------------------98-------------------+
| | | \-------- Thhalv10021075m [Eutrema salsugineum] (27)
| | |
| | |------------------------------------------------- AT3G18990.1 [Arabidopsis thaliana] (38)
| | |
| | |------------------------------------------------- Araha.3451s0002.1.p [Arabidopsis halleri] (63)
| | |
| | \------------------------------------------------- 479415 [Arabidopsis lyrata] (74)
| |
| | /-------- GSBRNA2T00021429001 [Brassica napus] (11)
\--100--+ /--100--+
| | \-------- XP_013622602.1 [Brassica oleracea] (110)
| /---100--+
| | | /-------- GSBRNA2T00137434001 [Brassica napus] (13)
| | \--100--+
| /--100--+ \-------- XP_009135606.1 [Brassica rapa] (130)
| | |
| | | /-------- Rsa1.0_06088.1_g00002.1 [Raphanus sativus] (23)
| | \-------100------+
| | \-------- RrC111_p2 [Raphanus raphanistrum] (87)
| |
\-----------100----------+ /-------- XP_009112206.1 [Brassica rapa] (30)
| /--100--+
| | \-------- GSBRNA2T00005597001 [Brassica napus] (94)
| /---100--+
| | | /-------- GSBRNA2T00101258001 [Brassica napus] (64)
| | \---99--+
\--100--+ \-------- XP_013604063.1 [Brassica oleracea] (97)
|
| /-------- Rsa1.0_09250.1_g00001.1 [Raphanus sativus] (34)
\-------100------+
\-------- RrC50_p6 [Raphanus raphanistrum] (79)
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