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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1128
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 132:
/------------------------------------------------------------- Eucgr.K00234.1.p [Eucalyptus grandis] (2)
|
| /------------------------- evm.model.supercontig_107.25 [Carica papaya] (3)
| |
| | /----- Gh_A08G2453 [Gossypium hirsutum] (9)
| | /-100+
| | | \----- Cotton_A_32389_BGI-A2_v1.0 [Gossypium arboreum] (94)
| /------------96-----------+ /---100---+
| | | | \---------- Gorai.004G120700.1 [Gossypium raimondii] (46)
| | | |
| | | | /----- Gh_A09G0391 [Gossypium hirsutum] (13)
| | | | /-100+
| | \-100+ | \----- Cotton_A_38798_BGI-A2_v1.0 [Gossypium arboreum] (30)
| | | /-100+
| | | | | /----- Gh_Sca007830G01 [Gossypium hirsutum] (67)
| | | | \-100+
| | \-88-+ \----- Gorai.006G047300.1 [Gossypium raimondii] (120)
| | |
| | \--------------- Thecc1EG015114t1 [Theobroma cacao] (54)
| |
| | /-------------------- 676769310 [Sisymbrium irio] (4)
--100+ | |
| | | /--------------- Rsa1.0_01567.1_g00002.1 [Raphanus sativus] (41)
| | /-100+ |
| | | | | /----- GSBRNA2T00050672001 [Brassica napus] (83)
| | | \-100+ /-100+
| | | | | \----- XP_013613235.1 [Brassica oleracea] (98)
| /-94-+ | \-100+
| | | /-100+ | /----- GSBRNA2T00110242001 [Brassica napus] (88)
| | | | | \-100+
| | | | | \----- XP_009106897.1 [Brassica rapa] (100)
| | | /-100-+ |
| | | | | \------------------------- Tp6g14420 [Thellungiella parvula] (38)
| | | | |
| | | | \------------------------------ Thhalv10015677m [Eutrema salsugineum] (17)
| | | |
| | | | /----- Carubv10028346m [Capsella rubella] (33)
| | | /-100+ /---100---+
| | | | | | \----- Cagra.0094s0026.1.p [Capsella grandiflora] (37)
| | | | | |
| | | | | /-100+ /----- Csa02g045180.1 [Camelina sativa] (39)
\-97-+ | | | | | /-100+
| | | | | | | \----- Csa11g083840.1 [Camelina sativa] (48)
| | /-100+ \------100------+ \-100+
| | | | | \---------- Csa18g023060.1 [Camelina sativa] (68)
| | | | |
| | | | \-------------------- Araha.33550s0002.1.p [Arabidopsis halleri] (44)
| \-100+ |
| | \----------------------------------------- AA55G00037 [Aethionema arabicum] (35)
| |
| | /----- XP_010537197.1 [Tarenaya hassleriana] (27)
| \-------------------100------------------+
| \----- XP_010555654.1 [Tarenaya hassleriana] (61)
|
| /----- Ciclev10004453m [Citrus clementina] (77)
\------------------------100-----------------------+
\----- orange1.1g003954m [Citrus sinensis] (87)
Subtree rooted at node 174:
/------------------------------ (132)
|
| /----- Cotton_A_03394_BGI-A2_v1.0 [Gossypium arboreum] (5)
| /-99-+
| | \----- Gh_A12G2601 [Gossypium hirsutum] (79)
| /-100+
| | | /----- Gh_D12G1049 [Gossypium hirsutum] (97)
| | \-100+
| | \----- Gorai.008G117200.1 [Gossypium raimondii] (130)
| /-53-+
| | | /----- Cotton_A_32341_BGI-A2_v1.0 [Gossypium arboreum] (36)
| | | /-100+
/--93-+ | | | \----- Gh_A11G0777 [Gossypium hirsutum] (78)
| | | \-100+
| | | | /----- Gorai.007G096000.1 [Gossypium raimondii] (42)
| | | \-100+
| | /-57-+ \----- Gh_D11G0906 [Gossypium hirsutum] (56)
| | | |
| | | |-------------------- Thecc1EG005412t1 [Theobroma cacao] (32)
| | | |
| | | | /----- Gh_D07G1441 [Gossypium hirsutum] (49)
| | | | /-100+
| | | | | \----- Gorai.001G171000.1 [Gossypium raimondii] (58)
/-93-+ | | \---100---+
| | \-54-+ | /----- Cotton_A_24123_BGI-A2_v1.0 [Gossypium arboreum] (73)
| | | \-100+
| | | \----- Gh_A07G1332 [Gossypium hirsutum] (82)
| | |
| | | /----- Ciclev10018855m [Citrus clementina] (16)
| | | /-100+
/--------100--------+ | | | \----- orange1.1g002869m [Citrus sinensis] (75)
| | | \------100-----+
| | | \---------- Neem_544_f_1 [Azadirachta indica] (71)
| | |
| | \------------------------------------ evm.model.supercontig_18.215 [Carica papaya] (53)
| |
| \----------------------------------------- Eucgr.D02248.1.p [Eucalyptus grandis] (7)
|
| /----------------------------------------- Thhalv10028440m [Eutrema salsugineum] (6)
| |
| | /----- Rsa1.0_00187.1_g00007.1 [Raphanus sativus] (10)
| | /---100---+
| | | \----- RrC450_p2 [Raphanus raphanistrum] (90)
| | |
| | /-100+ /----- XP_013629750.1 [Brassica oleracea] (19)
| | | | /-100+
| | | | | \----- GSBRNA2T00153520001 [Brassica napus] (45)
| | | \-100+
| | | | /----- GSBRNA2T00112150001 [Brassica napus] (62)
| | | \-100+
| | | \----- XP_009134533.1 [Brassica rapa] (96)
| /-91-+ /-51-+
| | | | | /----- XP_009111469.1 [Brassica rapa] (31)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00098329001 [Brassica napus] (74)
--100+ | | | | /-100+
| | | | | | | /----- GSBRNA2T00123560001 [Brassica napus] (47)
| | | /-61-+ | | \-100+
| | | | | \-100+ \----- XP_013612299.1 [Brassica oleracea] (140)
| | | | | |
| | | | | \--------------- RrC3092_p1 [Raphanus raphanistrum] (95)
| | | /--74-+ |
| | | | | \------------------------- 676743386 [Sisymbrium irio] (21)
| | | | |
| /-100+ \-81-+ \------------------------------ Tp6g00710 [Thellungiella parvula] (93)
| | | |
| | | \------------------------------------ KFK30661.1 [Arabis alpina] (52)
| | |
| | | /----- Carubv10000257m [Capsella rubella] (12)
| | | /------100-----+
| | | | \----- Cagra.6594s0010.1.p [Capsella grandiflora] (50)
| | | |
| | | | /----- Csa08g001850.1 [Camelina sativa] (23)
| | | /-100+ /-100+
| /-100+ | | | | \----- Csa13g056690.1 [Camelina sativa] (34)
| | | | | | /-100+
| | | | | | | \---------- Csa02g001790.1 [Camelina sativa] (66)
| | | \---------100--------+ \-99-+
| | | | \--------------- Bostr.10064s0036.1.p [Boechera stricta] (29)
| | | |
\-100+ | | /----- AT4G00730.1 [Arabidopsis thaliana] (43)
| | \---------99--------+
| | \----- Araha.19926s0004.1.p [Arabidopsis halleri] (63)
| |
| \--------------------------------------------------- AA32G00026 [Aethionema arabicum] (84)
|
\-------------------------------------------------------- XP_010523042.1 [Tarenaya hassleriana] (110)
Subtree rooted at node 200:
/---------- (174)
|
/----------------100----------------+ /----- XP_010544689.1 [Tarenaya hassleriana] (24)
| \-100+
| \----- XP_010523728.1 [Tarenaya hassleriana] (91)
|
| /------------------------- Thhalv10001317m [Eutrema salsugineum] (8)
| |
| | /----- XP_013637556.1 [Brassica oleracea] (15)
| | /-100+
| | | \----- GSBRNA2T00006095001 [Brassica napus] (86)
| /-100+ /-100+
| | | | | /----- XP_009143166.1 [Brassica rapa] (59)
| | | | \-100+
| | | /-100+ \----- GSBRNA2T00116732001 [Brassica napus] (72)
/-100+ | | | |
| | | \-100+ \--------------- 676734570 [Sisymbrium irio] (64)
| | /-100-+ |
| | | | \-------------------- Tp4g27810 [Thellungiella parvula] (76)
| | | |
| | | | /--------------- Bostr.25993s0196.1.p [Boechera stricta] (20)
| | | | |
| | | | | /----- Cagra.0050s0122.1.p [Capsella grandiflora] (55)
| | /-100+ \------100-----+ /-100+
| | | | | | \----- Carubv10022677m [Capsella rubella] (60)
| | | | \-100+
| | | | \---------- Csa05g003480.1 [Camelina sativa] (69)
| \-100+ |
/-93-+ | \------------------------------------ KFK37365.1 [Arabis alpina] (14)
| | |
| | \----------------------------------------- AA21G00315 [Aethionema arabicum] (57)
| |
| | /---------- AT3G61150.1 [Arabidopsis thaliana] (11)
| | |
| | /------100-----+ /----- Araha.3868s0004.1.p [Arabidopsis halleri] (85)
| | | \-100+
| | | \----- 324546 [Arabidopsis lyrata] (150)
| | |
| | | /----- Cagra.3373s0039.1.p [Capsella grandiflora] (18)
/-100+ | | /---100---+
| | \-----------100-----------+ | \----- Carubv10016704m [Capsella rubella] (28)
| | | |
| | | /-100+ /----- Csa16g003090.1 [Camelina sativa] (26)
| | | | | /-100+
| | | | | | \----- Csa07g003790.1 [Camelina sativa] (51)
| | \-100+ \-100+
--95-+ | | \---------- Csa05g093030.1 [Camelina sativa] (81)
| | |
| | \-------------------- Bostr.13158s0105.1.p [Boechera stricta] (92)
| |
| \-------------------------------------------------------- KFK35314.1 [Arabis alpina] (80)
|
\------------------------------------------------------------- Tp5g02230 [Thellungiella parvula] (99)
Root part of tree:
/------------------------------------------------------------------ XP_013592301.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------ GSBRNA2T00082469001 [Brassica napus] (65)
|
| /-------------------------- (200)
| |
+ /-----100-----+ /------------- Thhalv10005786m [Eutrema salsugineum] (22)
| | \-----100----+
| /-----100----+ \------------- 676749604 [Sisymbrium irio] (25)
| | |
| | \---------------------------------------- RrC2365_p2 [Raphanus raphanistrum] (70)
\-----100----+
| /------------- GSBRNA2T00099053001 [Brassica napus] (40)
\------------------100------------------+
\------------- XP_009104292.1 [Brassica rapa] (89)
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