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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1210
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 165:
/----- Neem_21033_f_1 [Azadirachta indica] (2)
/-100+
| \----- Neem_3103_f_6 [Azadirachta indica] (3)
/----92----+
| | /----- Ciclev10011967m [Citrus clementina] (49)
| \-100+
| \----- orange1.1g047550m [Citrus sinensis] (87)
|
| /----- Cotton_A_22094_BGI-A2_v1.0 [Gossypium arboreum] (6)
/----90---+ /-100+
| | | \----- Gh_A09G0136 [Gossypium hirsutum] (8)
| | /-100+
| | | | /----- Gh_D09G0129 [Gossypium hirsutum] (55)
| | | \-97-+
| \--97-+ \----- Gorai.006G015200.1 [Gossypium raimondii] (65)
| |
| \--------------- Thecc1EG033560t1 [Theobroma cacao] (9)
|
| /----- Neem_19759_f_1 [Azadirachta indica] (12)
| /-100+
| | \----- Neem_3061_f_7 [Azadirachta indica] (40)
/-89-+ /-96-+
| | | | /----- orange1.1g046309m [Citrus sinensis] (63)
| | | \-100+
| | /----61----+ \----- Ciclev10031944m [Citrus clementina] (96)
| | | |
| | | | /----- evm.model.supercontig_480.4 [Carica papaya] (15)
| | | \---100---+
| | | \----- evm.model.supercontig_1.43 [Carica papaya] (81)
| | |
| | | /----- Gh_D02G1266 [Gossypium hirsutum] (20)
| | | /-100+
| \-100+ | \----- Gorai.005G142000.1 [Gossypium raimondii] (42)
| | /-100+
/-85-+ | | \---------- Gh_A03G0883 [Gossypium hirsutum] (33)
| | | |
| | | /--97-+ /----- Cotton_A_27664_BGI-A2_v1.0 [Gossypium arboreum] (56)
| | | | | /-100+
| | | | | | \----- Gh_A13G0670 [Gossypium hirsutum] (70)
| | | | \-100+
| | \-100+ | /----- Gorai.013G086400.1 [Gossypium raimondii] (61)
| | | \-99-+
| | | \----- Gh_D13G0784 [Gossypium hirsutum] (73)
| | |
| | \--------------------- Thecc1EG011689t1 [Theobroma cacao] (44)
| |
| \------------------------------------ Eucgr.G02492.1.p [Eucalyptus grandis] (14)
|
| /----- Cotton_A_30714_BGI-A2_v1.0 [Gossypium arboreum] (7)
| /-100+
| | \----- Gh_A11G2041 [Gossypium hirsutum] (57)
| /----100---+
| | | /----- Gh_D11G2347 [Gossypium hirsutum] (58)
| | \-100+
| | \----- Gorai.007G253200.1 [Gossypium raimondii] (90)
| |
| | /----- Cotton_A_39067_BGI-A2_v1.0 [Gossypium arboreum] (24)
| /-99-+ /-100+
/-91-+ | | | \----- Gh_A11G2677 [Gossypium hirsutum] (93)
| | | | /-100+
| | | | | | /----- Gh_D11G3038 [Gossypium hirsutum] (53)
| | | | | \-97-+
| | | | | \----- Gorai.007G346400.1 [Gossypium raimondii] (54)
| | | \--57-+
| | | | /----- Gh_D13G1716 [Gossypium hirsutum] (37)
| | /-87-+ | /-99-+
| | | | | | \----- Gorai.013G196500.1 [Gossypium raimondii] (72)
| | | | \-100+
| | | | | /----- Cotton_A_22353_BGI-A2_v1.0 [Gossypium arboreum] (76)
| | | | \-100+
| | | | \----- Gh_A13G1401 [Gossypium hirsutum] (91)
| | | |
| | /-74-+ \-------------------------- evm.model.supercontig_73.4 [Carica papaya] (94)
| | | |
| | | | /---------- Ciclev10020631m [Citrus clementina] (34)
| | | | |
/----56----+ | | | /-100+ /----- Ciclev10023405m [Citrus clementina] (36)
| | | | | | \-93-+
| | | | | | \----- Ciclev10023285m [Citrus clementina] (66)
| | | | \------100------+
| | | | | /----- Neem_21258_f_1 [Azadirachta indica] (80)
| | \-70-+ \---100---+
| | | \----- Neem_14574_f_1 [Azadirachta indica] (89)
| | |
| | | /----- EcC050756.10 [Eucalyptus camaldulensis] (26)
| | |--------------100-------------+
| | | \----- Eucgr.K01542.1.p [Eucalyptus grandis] (77)
| | |
| | |------------------------------------ Carubv10006990m [Capsella rubella] (30)
| | |
| | \------------------------------------ Eucgr.A02150.1.p [Eucalyptus grandis] (52)
| |
| | /----- XP_010551438.1 [Tarenaya hassleriana] (5)
| \-------------------100------------------+
| \----- XP_010552570.1 [Tarenaya hassleriana] (92)
|
| /--------------------- 676720874 [Sisymbrium irio] (4)
| |
| | /----- GSBRNA2T00101931001 [Brassica napus] (28)
| | /-100+
| /-100+ | \----- XP_009105509.1 [Brassica rapa] (47)
| | | /-100+
| | | | | /----- GSBRNA2T00072002001 [Brassica napus] (29)
| | | | \-100+
| | \-100-+ \----- XP_013590819.1 [Brassica oleracea] (50)
| | |
/-100+ | | /----- Rsa1.0_00170.1_g00025.1 [Raphanus sativus] (48)
| | /-94-+ \---100---+
| | | | \----- RrC4340_p3 [Raphanus raphanistrum] (60)
| | | |
| | | | /----- Rsa1.0_00291.1_g00010.1 [Raphanus sativus] (13)
| | | | /---100---+
| | | | | \----- RrC6041_p1 [Raphanus raphanistrum] (75)
| | | | |
| | /-97-+ \----100---+ /----- GSBRNA2T00067589001 [Brassica napus] (67)
| | | | | /-98-+
| | | | | | \----- XP_013590777.1 [Brassica oleracea] (84)
| | | | \-100+
| | /-97-+ | \---------- GSBRNA2T00124300001 [Brassica napus] (83)
| | | | |
| | | | \------------------------------- Tp_un0193_001 [Thellungiella parvula] (64)
| | /-82-+ |
| | | | \------------------------------------ Thhalv10019759m [Eutrema salsugineum] (85)
| | | |
| | | \----------------------------------------- KFK41378.1 [Arabis alpina] (27)
--98-+ | |
| | | /--------------- Bostr.10273s0409.1.p [Boechera stricta] (11)
| | | |
| | /--97-+ | /----- Csa07g036300.1 [Camelina sativa] (16)
| | | | /-100-+ /-100+
| | | | | | | \----- Csa16g030980.1 [Camelina sativa] (46)
| | | | | \-100+
| | | | | | /----- Cagra.0820s0004.1.p [Capsella grandiflora] (38)
| | | | | \-100+
| | | \-----------100----------+ \----- Carubv10021327m [Capsella rubella] (45)
| \-95-+ |
| | | /---------- AT1G69560.1 [Arabidopsis thaliana] (19)
| | | |
| | \----100---+ /----- 476090 [Arabidopsis lyrata] (31)
| | \-89-+
| | \----- Araha.3134s0023.1.p [Arabidopsis halleri] (39)
| |
| \---------------------------------------------------- AA47G00003 [Aethionema arabicum] (43)
|
\-------------------------------------------------------------- AA39G00623 [Aethionema arabicum] (25)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_02350.1_g00001.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------- RrC10536_p1 [Raphanus raphanistrum] (69)
|
| /------------------------------------------- (165)
| |
| | /------ Araha.9126s0009.1.p [Arabidopsis halleri] (10)
| | /-100-+
| | | \------ 335722 [Arabidopsis lyrata] (71)
| | /----100----+
| | | \------------ AT1G26780.2 [Arabidopsis thaliana] (79)
| | |
| | | /------------ Csa17g034070.1 [Camelina sativa] (22)
| /--98-+ /--99-+ |
| | | | | /-100-+ /------ Csa03g028740.1 [Camelina sativa] (68)
| | | | | | \--96-+
| | | | | | \------ Csa14g031930.1 [Camelina sativa] (74)
| | | | \--92-+
| | | /--100-+ | /------ Carubv10011887m [Capsella rubella] (23)
| | | | | \----100----+
+ | | | | \------ Cagra.1150s0023.1.p [Capsella grandiflora] (86)
| | \--67-+ |
| | | \------------------------------ Bostr.12659s0321.1.p [Boechera stricta] (88)
| | |
| | \------------------------------------- KFK44581.1 [Arabis alpina] (21)
| |
| | /------ GSBRNA2T00081187001 [Brassica napus] (17)
| /-100-+ /-100-+
| | | | \------ XP_013603558.1 [Brassica oleracea] (95)
| | | /-100-+
| | | | | /------ XP_009110033.1 [Brassica rapa] (32)
| | | | \-100-+
| | | /-100-+ \------ GSBRNA2T00083998001 [Brassica napus] (62)
| | | | |
| | | | | /------ RrC1954_p1 [Raphanus raphanistrum] (35)
| /-100-+ |-----------55-----------+ \----100----+
| | | | | \------ Rsa1.0_02179.1_g00001.1 [Raphanus sativus] (41)
| | | | |
| | | | \------------------------ Tp1g22020 [Thellungiella parvula] (78)
| | | |
\-100-+ | \------------------------------------------------- Thhalv10008049m [Eutrema salsugineum] (18)
| |
| \------------------------------------------------------- 676715402 [Sisymbrium irio] (82)
|
| /------ XP_013585128.1 [Brassica oleracea] (51)
\--------------------------100-------------------------+
\------ GSBRNA2T00097415001 [Brassica napus] (59)
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