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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1211
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 165:
/---------- Csa20g067060.1 [Camelina sativa] (3)
|
/-100+ /----- Csa18g010690.1 [Camelina sativa] (30)
| \-57-+
| \----- Csa11g071780.1 [Camelina sativa] (55)
/-100-+
| | /----- Carubv10027543m [Capsella rubella] (60)
| \---100---+
/-76-+ \----- Cagra.1103s0008.1.p [Capsella grandiflora] (76)
| |
| \--------------------- Bostr.3148s0159.1.p [Boechera stricta] (40)
/-100+
| | /----- AT5G43170.1 [Arabidopsis thaliana] (29)
| \---------100--------+
/-72-+ \----- 917368 [Arabidopsis lyrata] (78)
| |
| \------------------------------- KFK31733.1 [Arabis alpina] (64)
|
/------------93-----------+ /--------------- Tp2g07950 [Thellungiella parvula] (26)
| | |
| | | /----- XP_013595850.1 [Brassica oleracea] (43)
| \---------100--------+ /-100+
| | | \----- GSBRNA2T00046227001 [Brassica napus] (74)
| | |
| \-100+---------- XP_009101805.1 [Brassica rapa] (67)
| |
| \---------- GSBRNA2T00018843001 [Brassica napus] (68)
|
| /----- Gh_A12G0173 [Gossypium hirsutum] (6)
| /-100+
| | \----- Cotton_A_24596_BGI-A2_v1.0 [Gossypium arboreum] (39)
| /-97-+
| | \---------- Gh_D12G0176 [Gossypium hirsutum] (70)
| /-100-+
| | \--------------- Gorai.008G020700.1 [Gossypium raimondii] (91)
| |
| /-98-+ /--------------- Gorai.005G232300.1 [Gossypium raimondii] (13)
| | | |
| | | | /----- Gh_A03G1611 [Gossypium hirsutum] (37)
| | \-100-+ /-97-+
| /-97-+ | | \----- Cotton_A_21716_BGI-A2_v1.0 [Gossypium arboreum] (75)
| | | \-78-+
| | | \---------- Gh_D02G2025 [Gossypium hirsutum] (83)
| | |
| | \-------------------------- Thecc1EG007214t1 [Theobroma cacao] (42)
| /-100+
| | | /----- Gorai.013G050100.1 [Gossypium raimondii] (57)
| | | /-89-+
| | | | \----- Gh_D13G0451 [Gossypium hirsutum] (88)
| | \---------100--------+
| | | /----- Cotton_A_27118_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | \-95-+
| /---100---+ \----- Gh_A13G2112 [Gossypium hirsutum] (86)
| | |
| | | /---------- Neem_14676_f_1 [Azadirachta indica] (41)
| | | |
| | | /-100+ /----- orange1.1g024499m [Citrus sinensis] (61)
| | | | \-100+
--100+ | | | \----- Ciclev10029065m [Citrus clementina] (62)
| | \---------59---------+
| | | /----- EcC048906.10 [Eucalyptus camaldulensis] (52)
| | \---100---+
| | \----- Eucgr.G01247.1.p [Eucalyptus grandis] (90)
| |
| | /---------- Cotton_A_14847_BGI-A2_v1.0 [Gossypium arboreum] (10)
| | |
| | /-100+ /----- Gorai.010G025200.1 [Gossypium raimondii] (38)
| | | \-100+
| | | \----- Gh_D06G2303 [Gossypium hirsutum] (58)
| | /-100-+
| | | | /---------- Cotton_A_20732_BGI-A2_v1.0 [Gossypium arboreum] (20)
| | | | |
| | | \-100+ /----- Gh_D01G1033 [Gossypium hirsutum] (27)
| | | \-99-+
| /-100-+ | \----- Gorai.002G132600.1 [Gossypium raimondii] (94)
| | | |
| | | /-100+ /----- Gh_A05G1815 [Gossypium hirsutum] (33)
| | | | | /-100+
| | | | | | \----- Cotton_A_23497_BGI-A2_v1.0 [Gossypium arboreum] (84)
| | | | | /-100+
| | | | | | | /----- Gh_D05G2011 [Gossypium hirsutum] (79)
| | | | | | \-99-+
| | | /-100+ \-100-+ \----- Gorai.009G218900.1 [Gossypium raimondii] (80)
| | | | | |
| | | | | | /----- Gh_A02G0836 [Gossypium hirsutum] (44)
| | | | | \---100---+
| | | /-63-+ | \----- Cotton_A_10916_BGI-A2_v1.0 [Gossypium arboreum] (53)
| | | | | |
| | | | | \-------------------------- Thecc1EG034720t1 [Theobroma cacao] (95)
| /-100+ | | |
| | | | | \------------------------------- Eucgr.F02262.1.p [Eucalyptus grandis] (81)
| | | | /-100+
| | | | | | /----- Ciclev10002297m [Citrus clementina] (11)
| | | | | | /-100+
| | | | | | | \----- orange1.1g038669m [Citrus sinensis] (63)
| | | \-84-+ \-----------100-----------+
| | | | \---------- Neem_38_f_3 [Azadirachta indica] (19)
| | | |
\-76-+ | | /----- evm.model.supercontig_249.7 [Carica papaya] (18)
| | \-----------------89----------------+
| | \----- XP_010556440.1 [Tarenaya hassleriana] (21)
| |
| | /----- XP_010538141.1 [Tarenaya hassleriana] (65)
| \----------------------98----------------------+
| \----- XP_010549267.1 [Tarenaya hassleriana] (93)
|
\--------------------------------------------------------- AA3G00256 [Aethionema arabicum] (36)
Subtree rooted at node 182:
/----- GSBRNA2T00003129001 [Brassica napus] (2)
/-100+
| \----- XP_013607245.1 [Brassica oleracea] (31)
/-98-+
| | /----- XP_009122614.1 [Brassica rapa] (51)
| \-100+
/-100-+ \----- GSBRNA2T00136367001 [Brassica napus] (54)
| |
| | /----- RrC203_p1 [Raphanus raphanistrum] (45)
/-72-+ \---100---+
| | \----- Rsa1.0_00465.1_g00007.1 [Raphanus sativus] (85)
| |
| \--------------------- 676718104 [Sisymbrium irio] (56)
|
/-98-+ /----- Tp6g38390 [Thellungiella parvula] (28)
| |---------64---------+
| | \----- Thhalv10014546m [Eutrema salsugineum] (77)
| |
| \-------------------------- KFK24883.1 [Arabis alpina] (59)
|
| /----- AT5G04340.1 [Arabidopsis thaliana] (16)
/-100+ /---------98---------+
| | | \----- 908317 [Arabidopsis lyrata] (73)
| | |
| | | /---------- Csa13g006350.1 [Camelina sativa] (23)
| | | |
| | | /-100+ /----- Csa20g005540.1 [Camelina sativa] (71)
| \-57-+ | \-100+
| | | \----- Csa08g060140.1 [Camelina sativa] (82)
/-99-+ | /-100-+
| | | | | /----- Cagra.9217s0012.1.p [Capsella grandiflora] (49)
| | | | \---100---+
| | \-100+ \----- Carubv10001868m [Capsella rubella] (50)
| | |
/-95-+ | \--------------------- Bostr.2128s0015.1.p [Boechera stricta] (92)
| | |
| | \------------------------------------ (165)
| |
| \----------------------------------------- KFK44656.1 [Arabis alpina] (24)
|
| /----- Csa03g030980.1 [Camelina sativa] (4)
| |
/--99-+ /-94-+----- Csa14g035300.1 [Camelina sativa] (17)
| | | |
| | | \----- Csa17g037510.1 [Camelina sativa] (48)
| | |
| | /-67-+---------- Bostr.15697s0099.1.p [Boechera stricta] (9)
| | | |
| | | | /----- Carubv10010130m [Capsella rubella] (69)
| | | \-100+
| \--------------86--------------+ \----- Cagra.1822s0082.1.p [Capsella grandiflora] (72)
/-93-+ |
| | | /---------- AT1G27730.1 [Arabidopsis thaliana] (46)
| | | |
| | \-100+ /----- Araha.9655s0001.1.p [Arabidopsis halleri] (47)
| | \-74-+
| | \----- 472978 [Arabidopsis lyrata] (89)
/-68-+ |
| | | /----- GSBRNA2T00117455001 [Brassica napus] (7)
| | \----------------------100---------------------+
| | \----- XP_013596068.1 [Brassica oleracea] (34)
| |
| \--------------------------------------------------------- Thhalv10010032m [Eutrema salsugineum] (22)
|
--100+ /----- XP_013623412.1 [Brassica oleracea] (5)
| /-100+
| | \----- GSBRNA2T00049994001 [Brassica napus] (96)
| /-95-+
| | | /----- GSBRNA2T00150622001 [Brassica napus] (8)
| | \-100+
\----------------------100---------------------+ \----- XP_009109781.1 [Brassica rapa] (97)
|
\--------------- RrC469_p4 [Raphanus raphanistrum] (15)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_06543.1_g00001.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------- RrC13861_p1 [Raphanus raphanistrum] (35)
|
| /----------------- (182)
+ /------100------+
| | \----------------- Tp1g23960 [Thellungiella parvula] (87)
| /-------100------+
| | \--------------------------------- 676777800 [Sisymbrium irio] (14)
| |
\-------100------+ /----------------- GSBRNA2T00038383001 [Brassica napus] (12)
| /-------97------+
| | \----------------- XP_009113736.1 [Brassica rapa] (25)
\-------96-------+
| /----------------- XP_013637900.1 [Brassica oleracea] (32)
\------100------+
\----------------- GSBRNA2T00142236001 [Brassica napus] (98)
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