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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1220
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 180:
/----- Cotton_A_21627_BGI-A2_v1.0 [Gossypium arboreum] (2)
/-100+
| \----- Gh_A09G1326 [Gossypium hirsutum] (23)
/------------------------100-----------------------+
| | /----- Gorai.006G152400.1 [Gossypium raimondii] (63)
| \-100+
| \----- Gh_D09G1287 [Gossypium hirsutum] (74)
|
| /----- AT3G11580.1 [Arabidopsis thaliana] (3)
| /------83------+
| | \----- 897360 [Arabidopsis lyrata] (68)
| |
| | /----- Csa01g012670.1 [Camelina sativa] (6)
| | |
| /---100---+ /-100+----- Csa19g015730.1 [Camelina sativa] (78)
| | | | |
| | | /-95-+ \----- Csa15g015410.1 [Camelina sativa] (95)
| | | | |
| | | | \---------- Bostr.19424s1090.1.p [Boechera stricta] (43)
| | \-99-+
| | | /----- Carubv10014376m [Capsella rubella] (51)
| | \---100---+
| | \----- Cagra.1655s0012.1.p [Capsella grandiflora] (84)
| |
| | /----- XP_009146703.1 [Brassica rapa] (9)
| | /-100+
| | | \----- GSBRNA2T00000286001 [Brassica napus] (76)
| | /-100+
| | | | /----- GSBRNA2T00111064001 [Brassica napus] (10)
| | | \-100+
| | /-100+ \----- XP_013638984.1 [Brassica oleracea] (83)
| | | |
| | | | /----- RrC3296_p1 [Raphanus raphanistrum] (15)
| | | \---100---+
| | | \----- Rsa1.0_05361.1_g00003.1 [Raphanus sativus] (47)
| /-100-+ /-99-+
| | | | | /----- RrC19558_p1 [Raphanus raphanistrum] (30)
| | | | | /-100+
| | | | | | \----- Rsa1.0_00179.1_g00035.1 [Raphanus sativus] (45)
| | | | \----99---+
| | |-68-+ | /----- XP_013622680.1 [Brassica oleracea] (39)
| | | | \-100+
| | | | \----- GSBRNA2T00111579001 [Brassica napus] (90)
| | | |
| | | \------------------------- Tp3g09820 [Thellungiella parvula] (97)
| | |
| | | /----- GSBRNA2T00036312001 [Brassica napus] (26)
| /-100+ | /-100+
| | | | | \----- XP_009124885.1 [Brassica rapa] (70)
| | | | /-56-+
| | | | | \---------- XP_013621203.1 [Brassica oleracea] (67)
| | | |------100-----+
| | | | | /----- RrC3493_p1 [Raphanus raphanistrum] (65)
| | | | \---100---+
| | | | \----- Rsa1.0_02593.1_g00005.1 [Raphanus sativus] (73)
| | | |
| | | \------------------------------ Thhalv10021305m [Eutrema salsugineum] (36)
| | |
| | \------------------------------------ AA52G00027 [Aethionema arabicum] (56)
| |
| | /----- AA119G00002 [Aethionema arabicum] (14)
| | /----80---+
| | | \----- Tp6g36630 [Thellungiella parvula] (93)
| | |
| | /-79-+ /----- Rsa1.0_06206.1_g00001.1 [Raphanus sativus] (40)
| | | | /-100+
| | | | | \----- RrC17675_p1 [Raphanus raphanistrum] (64)
| | | \-99-+
| | | \---------- 676732614 [Sisymbrium irio] (55)
| | |
| | /-82-+ /----- GSBRNA2T00096275001 [Brassica napus] (18)
| | | | /-100+
| | | | | \----- GSBRNA2T00107017001 [Brassica napus] (87)
| | | | /-100+
| | | | | \---------- XP_009122224.1 [Brassica rapa] (98)
| | | \-100+
| | /-82-+ \--------------- XP_013609500.1 [Brassica oleracea] (19)
| | | |
| | | | /----- Rsa1.0_00940.1_g00011.1 [Raphanus sativus] (28)
| | | | /---100---+
| /-89-+ | | | \----- RrC1029_p2 [Raphanus raphanistrum] (86)
| | | | | |
| | | | \---100---+ /----- XP_013628241.1 [Brassica oleracea] (41)
--99-+ | | /--68-+ | /-100+
| | | | | | | \----- GSBRNA2T00134427001 [Brassica napus] (77)
| | | | | \-100+
| | | | | | /----- GSBRNA2T00086985001 [Brassica napus] (69)
| | | | | \-100+
| | | | | \----- XP_009130926.1 [Brassica rapa] (92)
| | | | |
| | | | \------------------------------ Thhalv10015675m [Eutrema salsugineum] (62)
| | | |
| | | | /----- Araha.4200s0011.1.p [Arabidopsis halleri] (22)
| | | | /-100+
| | | | | \----- 487432 [Arabidopsis lyrata] (32)
| | | | /-100+
| | | | | \---------- AT5G06250.2 [Arabidopsis thaliana] (44)
| | |-95-+ /-100+
| | | | | \--------------- Bostr.13129s0349.1.p [Boechera stricta] (29)
| | | | |
| | | | | /----- Cagra.2117s0038.1.p [Capsella grandiflora] (25)
| | | |------100------+ /---100---+
| | | | | | \----- Carubv10001689m [Capsella rubella] (35)
| | | | | |
| | | | \-100+ /----- Csa13g008230.1 [Camelina sativa] (38)
| | | | | /-83-+
| | | | | | \----- Csa08g058280.1 [Camelina sativa] (72)
| | | | \-100+
| | | | \---------- Csa20g008460.1 [Camelina sativa] (81)
| | | |
| | | \------------------------------------ KFK25025.1 [Arabis alpina] (49)
| | |
| | | /----- XP_010543925.1 [Tarenaya hassleriana] (34)
| | \-----------------98----------------+
| | \----- XP_010558919.1 [Tarenaya hassleriana] (85)
| |
| | /----- Csa04g049540.1 [Camelina sativa] (4)
| | |
| | /-100+----- Csa06g038670.1 [Camelina sativa] (80)
| | | |
| /-66-+ | \----- Csa05g018030.1 [Camelina sativa] (91)
| | | /-99-+
| | | | | /----- Carubv10023925m [Capsella rubella] (13)
| | | | \-100+
| | | /-100+ \----- Cagra.0993s0119.1.p [Capsella grandiflora] (31)
| | | | |
| | | | \--------------- Bostr.23794s0488.1.p [Boechera stricta] (61)
| | | /-85-+
| | | | | /----- AT2G36080.1 [Arabidopsis thaliana] (48)
| | | | \------88------+
| | | | \----- 902720 [Arabidopsis lyrata] (66)
| | | |
| | | |------------------------- Tp4g18310 [Thellungiella parvula] (7)
| | | |
| | | | /----- XP_009143617.1 [Brassica rapa] (11)
| | | | /-100+
| | | | | \----- GSBRNA2T00117107001 [Brassica napus] (27)
| | | | /-99-+
| | | | | | /----- GSBRNA2T00141192001 [Brassica napus] (42)
| | | | | \-100+
| | | | /-100+ \----- XP_013634346.1 [Brassica oleracea] (53)
| | | | | |
| | | | | | /----- Rsa1.0_00672.1_g00002.1 [Raphanus sativus] (24)
| | | |-65-+ \---100---+
| | | /-82-+ | \----- RrC21563_p1 [Raphanus raphanistrum] (58)
| /-98-+ | | | |
| | | | | | \-------------------- 676787882 [Sisymbrium irio] (60)
| | | | | |
| | | | | | /----- GSBRNA2T00077247001 [Brassica napus] (21)
| | | | | | /-94-+
| | | | | | | \----- XP_009141558.1 [Brassica rapa] (100)
| | | | | | /-70-+
| | | | | | | \---------- XP_013614625.1 [Brassica oleracea] (96)
| | | | /-100-+ | /-100+
| | | | | | | | | /----- Rsa1.0_00308.1_g00009.1 [Raphanus sativus] (37)
| | | | | | | | \---100---+
| | | | | | |-54-+ \----- RrC30704_p1 [Raphanus raphanistrum] (71)
| | | | | | | |
| | | | | | | \-------------------- AA60G00186 [Aethionema arabicum] (88)
| | | \---100---+ | |
| | | | | \------------------------- KFK36503.1 [Arabis alpina] (50)
| | | | |
\-100+ | | \------------------------------ Thhalv10017156m [Eutrema salsugineum] (8)
| | |
| | \------------------------------------ XP_010553392.1 [Tarenaya hassleriana] (12)
| |
| | /---------- EcC039386.10 [Eucalyptus camaldulensis] (33)
| | |
| | /-64-+ /----- EcC005481.10 [Eucalyptus camaldulensis] (57)
| | | \-70-+
| \----------------100----------------+ \----- Eucgr.A02625.1.p [Eucalyptus grandis] (75)
| |
| \--------------- EcC050706.10 [Eucalyptus camaldulensis] (46)
|
| /----- Ciclev10012008m [Citrus clementina] (5)
| /-100+
| | \----- orange1.1g019261m [Citrus sinensis] (17)
| /-100+
| | \---------- Neem_9880_f_1 [Azadirachta indica] (20)
\-------------------100------------------+
\--------------- evm.TU.contig_29173.1 [Carica papaya] (89)
Root part of tree:
/------------------------------------------------------------------ Gorai.002G237900.1 [Gossypium raimondii] (1)
|
|------------------------------------------------------------------ Gh_D01G2375 [Gossypium hirsutum] (59)
|
| /-------------------------------------------- (180)
| |
| | /----------- Cotton_A_40609_BGI-A2_v1.0 [Gossypium arboreum] (16)
+ | /----100---+
| /----100---+ | \----------- Gh_A04G1385 [Gossypium hirsutum] (54)
| | | /----100---+
| | | | | /----------- Gh_D04G0927 [Gossypium hirsutum] (79)
| | | | \----91----+
| | \----88----+ \----------- Gorai.009G399000.1 [Gossypium raimondii] (82)
\----94----+ |
| \--------------------------------- Thecc1EG022729t1 [Theobroma cacao] (94)
|
| /----------- Gh_A01G1745 [Gossypium hirsutum] (52)
\--------------------100--------------------+
\----------- Cotton_A_10166_BGI-A2_v1.0 [Gossypium arboreum] (99)
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