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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1249
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 153:
/----- Carubv10014025m [Capsella rubella] (2)
/-100+
| \----- Cagra.9070s0001.1.p [Capsella grandiflora] (80)
/-92-+
| \---------- Bostr.18351s0439.1.p [Boechera stricta] (18)
/----100---+
| | /----- 480488 [Arabidopsis lyrata] (36)
| \---100---+
| \----- AT2G19810.1 [Arabidopsis thaliana] (72)
|
| /----- GSBRNA2T00138011001 [Brassica napus] (15)
| /-100+
| | \----- XP_013593099.1 [Brassica oleracea] (53)
| /-100+
| | | /----- XP_009102134.1 [Brassica rapa] (21)
| | \-97-+
/-100+ /-100-+ \----- GSBRNA2T00059437001 [Brassica napus] (32)
| | | |
| | | | /----- RrC6417_p1 [Raphanus raphanistrum] (76)
| | | \---100---+
| |-59-+ \----- Rsa1.0_01391.1_g00003.1 [Raphanus sativus] (78)
| | |
/---------100--------+ | |--------------------- Tp3g33170 [Thellungiella parvula] (22)
| | | |
| | | \--------------------- Thhalv10002026m [Eutrema salsugineum] (30)
| | |
| | \-------------------------- KFK40348.1 [Arabis alpina] (47)
| |
| \------------------------------- AA33G00259 [Aethionema arabicum] (12)
|
| /----- XP_009109049.1 [Brassica rapa] (3)
| /-100+
| | \----- XP_013627920.1 [Brassica oleracea] (16)
| /-100+
| | | /----- Rsa1.0_00410.1_g00016.1 [Raphanus sativus] (9)
| | \-100+
| | \----- RrC21835_p1 [Raphanus raphanistrum] (37)
| /-100-+
| | | /----- XP_013595591.1 [Brassica oleracea] (5)
| | | /-100+
| | | | \----- XP_009137834.1 [Brassica rapa] (44)
| | \-100+
| /-94-+ | /----- RrC268_p5 [Raphanus raphanistrum] (64)
| | | \-100+
| | | \----- Rsa1.0_00011.1_g00009.1 [Raphanus sativus] (77)
/-100+ /-80-+ |
| | | | \--------------------- 676753330 [Sisymbrium irio] (59)
| | | |
| | | \-------------------------- Tp7g27110 [Thellungiella parvula] (54)
| | /-100+
| | | | /----- XP_009128959.1 [Brassica rapa] (25)
| | | | /-100+
| | | | | \----- XP_013610124.1 [Brassica oleracea] (86)
| | | \---------100--------+
| | /-100+ | /----- Rsa1.0_02425.1_g00001.1 [Raphanus sativus] (51)
| | | | \-100+
| | | | \----- RrC2110_p3 [Raphanus raphanistrum] (88)
| | | |
| | | \------------------------------------ Thhalv10025226m [Eutrema salsugineum] (60)
| | |
| | | /--------------- Bostr.7867s0764.1.p [Boechera stricta] (17)
| | /-100+ |
/-100+ | | | | /----- Carubv10007208m [Capsella rubella] (33)
| | | | | /-100-+ /-100+
| | | | | | | | \----- Cagra.0495s0060.1.p [Capsella grandiflora] (48)
| | | | | | \-100+
| | | | | | | /----- Csa10g013380.1 [Camelina sativa] (49)
| | | | \--------100--------+ \-99-+
| | \-100-+ | \----- Csa12g019280.1 [Camelina sativa] (57)
| | | |
| | | | /----- AT4G29190.1 [Arabidopsis thaliana] (23)
| | | \------100------+
| | | \----- 491837 [Arabidopsis lyrata] (58)
| | |
| | \---------------------------------------------- AA102G00069 [Aethionema arabicum] (34)
| |
| | /----- XP_010548687.1 [Tarenaya hassleriana] (7)
| | |
| \------------------------100------------------------+----- XP_010526424.1 [Tarenaya hassleriana] (81)
| |
| \----- XP_010540993.1 [Tarenaya hassleriana] (83)
|
| /----- Tp4g05800 [Thellungiella parvula] (4)
| /-----------100-----------+
| | \----- 676713788 [Sisymbrium irio] (40)
| |
| | /----- 481444 [Arabidopsis lyrata] (31)
| | /-------95------+
| | | \----- Araha.11061s0001.1.p [Arabidopsis halleri] (68)
| | |
| | | /----- Cagra.8929s0001.1.p [Capsella grandiflora] (55)
| /-95-+ | /-100+
| | | | | \----- Carubv10023740m [Capsella rubella] (67)
| | | | /-98-+
| | | /-100+ | | /----- Csa09g092110.1 [Camelina sativa] (65)
--87-+ | | | | | \-100+
| | | | |--97-+ \----- Csa16g047520.1 [Camelina sativa] (73)
| | | | | |
| /-100+ \-73-+ | \--------------- Bostr.26326s0060.1.p [Boechera stricta] (61)
| | | | |
| | | | \--------------------- AT2G25900.1 [Arabidopsis thaliana] (71)
| | | |
| | | \-------------------------- Thhalv10002045m [Eutrema salsugineum] (41)
| /-100+ |
| | | | /----- AA32G01067 [Aethionema arabicum] (70)
| | | \--------------100-------------+
| | | \----- KFK32533.1 [Arabis alpina] (79)
| | |
| | \----------------------------------------- XP_010526073.1 [Tarenaya hassleriana] (84)
| |
| | /----- Gorai.009G047600.1 [Gossypium raimondii] (8)
| | /-92-+
| | | \----- Gh_D05G0463 [Gossypium hirsutum] (63)
| | /----100---+
| | | | /----- Cotton_A_30952_BGI-A2_v1.0 [Gossypium arboreum] (62)
| /--70-+ | \-100+
| | | | \----- Gh_A05G0346 [Gossypium hirsutum] (75)
| | | |
| | | | /----- Gh_A07G2288 [Gossypium hirsutum] (13)
| | | /-93-+ /-93-+
| | | | | | \----- Cotton_A_05602_BGI-A2_v1.0 [Gossypium arboreum] (19)
| | | | | /-100+
| | | | | | | /----- Gh_D07G2410 [Gossypium hirsutum] (43)
| | | | | | \-100+
| | | | \--61-+ \----- Gorai.001G024400.1 [Gossypium raimondii] (87)
| | | | |
| | \--------100--------+ \--------------- Thecc1EG037243t1 [Theobroma cacao] (42)
\---100---+ |
| | /----- Cotton_A_11892_BGI-A2_v1.0 [Gossypium arboreum] (10)
| | /-100+
| | | \----- Gh_A08G2230 [Gossypium hirsutum] (14)
| | /-100+
| | | \---------- Gh_D08G2596 [Gossypium hirsutum] (20)
| \----100---+
| \--------------- Gorai.004G288300.1 [Gossypium raimondii] (28)
|
| /---------- EcC007213.10 [Eucalyptus camaldulensis] (38)
| |
\-------------------100-------------------+ /----- Eucgr.C02990.1.p [Eucalyptus grandis] (52)
\-96-+
\----- EcS782740.10 [Eucalyptus camaldulensis] (74)
Root part of tree:
/------------------------------------------------------------------- Gh_A13G1728 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Cotton_A_03125_BGI-A2_v1.0 [Gossypium arboreum] (69)
|
| /-------------------------------------- (153)
| |
| | /----------------------------- evm.model.supercontig_1427.1 [Carica papaya] (6)
| /---100---+ |
| | | | /---------- orange1.1g016862m [Citrus sinensis] (24)
| | \---51---+ /---100--+
| | | | \---------- Ciclev10008633m [Citrus clementina] (56)
| | \----76---+
+ | \------------------- Eucgr.C03701.1.p [Eucalyptus grandis] (85)
| |
| | /---------- Gh_D07G0096 [Gossypium hirsutum] (11)
| /---100--+ /---98---+
| | | | \---------- Gorai.001G009900.1 [Gossypium raimondii] (27)
| | | /--------100-------+
| | | | | /---------- Cotton_A_10312_BGI-A2_v1.0 [Gossypium arboreum] (35)
| | | | \---56---+
| | | | \---------- Gh_A07G0087 [Gossypium hirsutum] (50)
| | | |
| | | | /---------- Gh_A05G0200 [Gossypium hirsutum] (26)
| | \----60---+ /---93---+
\---100---+ | | \---------- Cotton_A_09390_BGI-A2_v1.0 [Gossypium arboreum] (39)
| | /---100---+
| | | | /---------- Gorai.009G029300.1 [Gossypium raimondii] (46)
| | | \---93---+
| \---50---+ \---------- Gh_D05G0276 [Gossypium hirsutum] (82)
| |
| \----------------------------- Thecc1EG037730t1 [Theobroma cacao] (66)
|
| /---------- Gh_D13G2076 [Gossypium hirsutum] (29)
\----------------------100---------------------+
\---------- Gorai.013G229000.1 [Gossypium raimondii] (45)
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