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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1265
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 162:
/------------------------------- Thhalv10007075m [Eutrema salsugineum] (3)
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| /-------------------------- Tp1g28280 [Thellungiella parvula] (16)
| |
| | /----- XP_013605028.1 [Brassica oleracea] (28)
| | /-100+
/-100+ | | \----- GSBRNA2T00139997001 [Brassica napus] (56)
| | | /-100+
| | | | | /----- Rsa1.0_00815.1_g00003.1 [Raphanus sativus] (42)
| | | | \-100+
| | | /--56-+ \----- RrC8230_p1 [Raphanus raphanistrum] (80)
| | | | |
| \-85-+ | | /----- Rsa1.0_02351.1_g00002.1 [Raphanus sativus] (75)
| |-64-+ \---100---+
| | | \----- RrC11277_p1 [Raphanus raphanistrum] (83)
| | |
| | \--------------------- 676708010 [Sisymbrium irio] (84)
| |
| | /----- RrC1757_p5 [Raphanus raphanistrum] (46)
| | /-100+
| | | \----- Rsa1.0_00043.1_g00007.1 [Raphanus sativus] (71)
| \------100------+
/-100+ | /----- XP_009151447.1 [Brassica rapa] (57)
| | \-100+
| | \----- XP_013586726.1 [Brassica oleracea] (92)
| |
| | /--------------------- Bostr.3359s0090.1.p [Boechera stricta] (4)
| | |
| | | /----- Carubv10008586m [Capsella rubella] (13)
| | | /-100+
| | | | \----- Cagra.7865s0024.1.p [Capsella grandiflora] (96)
| | /-100+ /-100+
| | | | | | /----- Csa17g053090.1 [Camelina sativa] (40)
/-100+ | | | | \-100+
| | | | | | \----- Csa14g042820.1 [Camelina sativa] (53)
| | | | \-100-+
| | | | | /---------- AT1G32640.1 [Arabidopsis thaliana] (81)
| | \----51---+ | |
| | | \-100+ /----- Araha.8375s0001.1.p [Arabidopsis halleri] (86)
| | | \-84-+
| | | \----- 890840 [Arabidopsis lyrata] (95)
/-100-+ | |
| | | \-------------------------- KFK45000.1 [Arabis alpina] (90)
| | |
| | \----------------------------------------- AA53G00247 [Aethionema arabicum] (18)
| |
| | /----- XP_010540785.1 [Tarenaya hassleriana] (25)
| | |
| \-------------------100------------------+----- XP_010538366.1 [Tarenaya hassleriana] (35)
| |
| \----- XP_010531704.1 [Tarenaya hassleriana] (66)
|
| /----- Ciclev10011214m [Citrus clementina] (10)
| /-100+
| | \----- orange1.1g005651m [Citrus sinensis] (43)
| /-100+
| | | /----- Neem_22734_f_1 [Azadirachta indica] (11)
| | \-100+
| /----72----+ \----- Neem_16938_f_1 [Azadirachta indica] (26)
| | |
| | | /----- EcC005899.20 [Eucalyptus camaldulensis] (47)
| | \----82---+
| | \----- Eucgr.E00277.1.p [Eucalyptus grandis] (72)
/-100+ |
| | | /----- Gorai.004G184800.1 [Gossypium raimondii] (23)
| | | /-97-+
| | | | \----- Gh_D08G1707 [Gossypium hirsutum] (59)
| | | /-100+
| | | | \---------- Gh_A08G1412 [Gossypium hirsutum] (39)
| | | |
| | | | /----- Cotton_A_07316_BGI-A2_v1.0 [Gossypium arboreum] (27)
| | /-72-+ | /-99-+
| | | | | | \----- Gh_A09G2341 [Gossypium hirsutum] (33)
| | | | |-100+
| | | | | | /----- Gh_D09G1895 [Gossypium hirsutum] (32)
| | | | /--51-+ \-99-+
| | | | | | \----- Gorai.006G216700.1 [Gossypium raimondii] (62)
| | | | | |
| | | | | |--------------- Thecc1EG015714t1 [Theobroma cacao] (38)
| | | | | |
| | | | | | /----- Gh_D12G2074 [Gossypium hirsutum] (77)
| | | | | | /-66-+
/-99-+ | | | | | | \----- Gorai.008G226300.1 [Gossypium raimondii] (94)
| | | | \-96-+ \-100+
| | \---------94---------+ | | /----- Cotton_A_07908_BGI-A2_v1.0 [Gossypium arboreum] (78)
| | | | \-100+
| | | | \----- Gh_A12G1893 [Gossypium hirsutum] (91)
| | | |
| | | | /----- Gorai.003G182100.1 [Gossypium raimondii] (37)
| | | | /-99-+
| | | | | \----- Gh_D03G1849 [Gossypium hirsutum] (70)
| | | \----100---+
| | | | /----- Gh_A03G0010 [Gossypium hirsutum] (45)
| | | \-100+
| | | \----- Cotton_A_23114_BGI-A2_v1.0 [Gossypium arboreum] (50)
| | |
| | \------------------------------- evm.model.supercontig_71.72 [Carica papaya] (88)
| |
| | /---------- XP_010559309.1 [Tarenaya hassleriana] (15)
| | |
| \----------------------100---------------------+ /----- XP_010530031.1 [Tarenaya hassleriana] (29)
| \-100+
| \----- XP_010538501.1 [Tarenaya hassleriana] (87)
|
| /----- Carubv10004392m [Capsella rubella] (8)
--100+ /---100---+
| | \----- Cagra.3356s0080.1.p [Capsella grandiflora] (52)
| |
| /--53-+ /----- Csa10g027420.1 [Camelina sativa] (36)
| | | /-55-+
| | | | \----- Csa11g030670.1 [Camelina sativa] (61)
| /-100+ \-100+
| | | \---------- Csa12g045650.1 [Camelina sativa] (65)
| | |
| | \--------------------- Bostr.30275s0255.1.p [Boechera stricta] (54)
| /------100-----+
| | | /---------- AT4G17880.1 [Arabidopsis thaliana] (9)
| | | |
| | \------100------+ /----- 493087 [Arabidopsis lyrata] (64)
| | \-100+
| | \----- Araha.2292s0001.1.p [Arabidopsis halleri] (74)
| |
| | /----- RrC3065_p2 [Raphanus raphanistrum] (14)
| | /---100---+
| | | \----- Rsa1.0_00191.1_g00036.1 [Raphanus sativus] (76)
| | |
| | /-100-+ /----- GSBRNA2T00131278001 [Brassica napus] (17)
\---------100--------+ | | /-100+
| | | | \----- XP_009131125.1 [Brassica rapa] (60)
| | \-100+
| /-100+ | /----- XP_013605597.1 [Brassica oleracea] (21)
| | | \-100+
| | | \----- GSBRNA2T00080269001 [Brassica napus] (69)
| /-71-+ |
| | | \--------------------- 676728310 [Sisymbrium irio] (79)
| | |
| /-100+ \-------------------------- Tp7g16240 [Thellungiella parvula] (22)
| | |
\-99-+ \------------------------------- Thhalv10024688m [Eutrema salsugineum] (63)
|
\------------------------------------ KFK28472.1 [Arabis alpina] (67)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00058078001 [Brassica napus] (1)
|
|------------------------------------------------------------------- XP_009114329.1 [Brassica rapa] (7)
|
| /------ Rsa1.0_02220.1_g00001.1 [Raphanus sativus] (2)
| /-----------------------100-----------------------+
| | \------ RrC4697_p2 [Raphanus raphanistrum] (12)
| |
| | /------ (162)
| | /---------------100--------------+
| | | \------ AA56G00010 [Aethionema arabicum] (6)
| | |
| | | /------ Cagra.0751s0023.1.p [Capsella grandiflora] (5)
| | | /----100---+
| | | | \------ Carubv10028441m [Capsella rubella] (30)
| | | |
| | | /-100+ /------ Csa18g003270.1 [Camelina sativa] (20)
| | | | | /-100+
+ | /-100-+ | | | \------ Csa11g065190.1 [Camelina sativa] (82)
| | | | /-100-+ \-100-+
| | | | | | \----------- Csa20g080920.1 [Camelina sativa] (93)
| /-100+ | | | |
| | | | | | \---------------------- Bostr.28243s0060.1.p [Boechera stricta] (19)
| | | | | /-100+
| | | | | | | /------ Araha.11658s0006.1.p [Arabidopsis halleri] (44)
| | | | | | | /-100+
| | | | | | | | \------ 916752 [Arabidopsis lyrata] (85)
| | | /-68-+ \-100-+ \-------100------+
| | | | | | \----------- AT5G46760.1 [Arabidopsis thaliana] (51)
| | | | | |
| | | | | \--------------------------------- KFK31432.1 [Arabis alpina] (41)
| | | | |
| | | | | /------ Tp_un0036_004 [Thellungiella parvula] (31)
| | | | | /-100+
| | | | | | \------ Tp2g11570 [Thellungiella parvula] (68)
\-100-+ | | \---------------100---------------+
| \-100-+ \----------- Thhalv10000808m [Eutrema salsugineum] (89)
| |
| | /------ GSBRNA2T00023683001 [Brassica napus] (24)
| | /-100+
| | | \------ XP_009101493.1 [Brassica rapa] (49)
| | /-100-+
| | | | /------ XP_013598243.1 [Brassica oleracea] (34)
| | | \-100+
| \---------------100--------------+ \------ GSBRNA2T00128661001 [Brassica napus] (73)
| |
| \----------------- 676778854 [Sisymbrium irio] (48)
|
| /------ XP_013612311.1 [Brassica oleracea] (55)
\--------------------------99--------------------------+
\------ GSBRNA2T00115684001 [Brassica napus] (58)
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