Subtree rooted at node 138:

                                                                    /----- XP_009108520.1 [Brassica rapa]                          (2)
                                                               /-100+                 
                                                               |    \----- XP_013627286.1 [Brassica oleracea]                      (41)
                                     /-----------100-----------+                      
                                     |                         \---------- Rsa1.0_01263.1_g00002.1 [Raphanus sativus]              (12)
                                     |                                                
                                     |                              /----- Csa10g022530.1 [Camelina sativa]                        (3)
                                     |                         /-100+                 
                                     |                         |    \----- Csa11g025540.1 [Camelina sativa]                        (54)
                                     |                    /-97-+                      
                                     |                    |    \---------- Bostr.10689s0049.1.p [Boechera stricta]                 (74)
                                     |              /--94-+                           
                                     |              |     |         /----- Cagra.1062s0041.1.p [Capsella grandiflora]              (56)
                                     |              |     \---100---+                 
                                     |              |               \----- Carubv10005784m [Capsella rubella]                      (65)
                                     |         /-100+                                 
                                     |         |    |               /----- Araha.12732s0021.1.p [Arabidopsis halleri]              (69)
                                     |         |    |          /-100+                 
                                /-53-+         |    |          |    \----- 329503 [Arabidopsis lyrata]                             (71)
                                |    |    /-100+    \----100---+                      
                                |    |    |    |               \---------- AT4G20970.1 [Arabidopsis thaliana]                      (85)
                                |    |    |    |                                      
                                |    |-99-+    \-------------------------- KFK28692.1 [Arabis alpina]                              (22)
                                |    |    |                                           
                                |    |    \------------------------------- Thhalv10026322m [Eutrema salsugineum]                   (24)
                                |    |                                                
                                |    |                              /----- XP_013590924.1 [Brassica oleracea]                      (13)
                                |    |                         /-99-+                 
                                |    |                         |    \----- XP_013615754.1 [Brassica oleracea]                      (51)
                           /-98-+    |                    /-100+                      
                           |    |    |                    |    \---------- XP_009134156.1 [Brassica rapa]                          (64)
                           |    |    |              /-100-+                           
                           |    |    |              |     \--------------- Rsa1.0_00108.1_g00039.1 [Raphanus sativus]              (53)
                           |    |    \------93------+                                 
                           |    |                   \--------------------- 676713246 [Sisymbrium irio]                             (82)
                           |    |                                                     
                     /-100-+    |                                   /----- XP_009137159.1 [Brassica rapa]                          (28)
                     |     |    |                              /-100+                 
                     |     |    |                              |    \----- XP_013596661.1 [Brassica oleracea]                      (57)
                     |     |    \--------------100-------------+                      
                     |     |                                   \---------- Rsa1.0_08460.1_g00002.1 [Raphanus sativus]              (31)
                /-100+     |                                                          
                |    |     \---------------------------------------------- AA57G00303 [Aethionema arabicum]                        (91)
                |    |                                                                
                |    |                                              /----- XP_010537647.1 [Tarenaya hassleriana]                   (59)
           /-91-+    \----------------------100---------------------+                 
           |    |                                                   \----- XP_010538664.1 [Tarenaya hassleriana]                   (88)
           |    |                                                                     
           |    \--------------------------------------------------------- evm.model.supercontig_27.35 [Carica papaya]             (5)
           |                                                                          
           |                                                        /----- Eucgr.E03270.1.p [Eucalyptus grandis]                   (4)
           |                                        /------100------+                 
           |                                        |               \----- EcC052511.30 [Eucalyptus camaldulensis]                 (63)
           |                                        |                                 
           |                                        |          /---------- Eucgr.E03272.1.p [Eucalyptus grandis]                   (6)
           |                                   /-88-+          |                      
           |                                   |    |     /-95-+    /----- EcC040551.10 [Eucalyptus camaldulensis]                 (26)
           |                                   |    |     |    \-95-+                 
           |                                   |    \-100-+         \----- EcS736265.10 [Eucalyptus camaldulensis]                 (49)
           |                              /-100+          |                           
           |                              |    |          \--------------- Eucgr.E03273.1.p [Eucalyptus grandis]                   (58)
           |                              |    |                                      
      --97-+                         /-90-+    \-------------------------- Eucgr.E03271.1.p [Eucalyptus grandis]                   (47)
           |                         |    |                                           
           |                         |    |                         /----- EcC030907.10 [Eucalyptus camaldulensis]                 (40)
           |                         |    \-----------100-----------+                 
           |                         |                              \----- Eucgr.D00616.1.p [Eucalyptus grandis]                   (75)
           |                    /-95-+                                                
           |                    |    |                              /----- orange1.1g029713m [Citrus sinensis]                     (16)
           |                    |    |                         /-100+                 
           |                    |    |                         |    \----- Ciclev10016846m [Citrus clementina]                     (70)
           |                    |    \------------97-----------+                      
           |                    |                              |    /----- Neem_25137_f_1 [Azadirachta indica]                     (17)
           |                    |                              \-100+                 
           |                    |                                   \----- Neem_6384_f_1 [Azadirachta indica]                      (92)
           |                    |                                                     
           |                    |                                   /----- Gorai.011G028400.1 [Gossypium raimondii]                (19)
           |                    |                              /-100+                 
           \---------91---------+                              |    \----- Gh_D10G0240 [Gossypium hirsutum]                        (48)
                                |                         /-100+                      
                                |                         |    |    /----- Gh_A10G2207 [Gossypium hirsutum]                        (43)
                                |                         |    \-96-+                 
                                |                   /--99-+         \----- Cotton_A_03906_BGI-A2_v1.0 [Gossypium arboreum]         (60)
                                |                   |     |                           
                                |                   |     |         /----- Gh_D05G1534 [Gossypium hirsutum]                        (50)
                                |              /-95-+     \---100---+                 
                                |              |    |               \----- Gorai.009G169200.1 [Gossypium raimondii]                (66)
                                |              |    |                                 
                                |              |    \--------------------- Thecc1EG029852t1 [Theobroma cacao]                      (62)
                                \------100-----+                                      
                                               |          /--------------- Cotton_A_36436_BGI-A2_v1.0 [Gossypium arboreum]         (23)
                                               |          |                           
                                               |          |         /----- Gh_D06G1384 [Gossypium hirsutum]                        (46)
                                               \----100---+    /-100+                 
                                                          |    |    \----- Gorai.010G154100.1 [Gossypium raimondii]                (90)
                                                          \-80-+                      
                                                               \---------- Gh_A06G2080 [Gossypium hirsutum]                        (68)
                                                                                      
      Subtree rooted at node 172:

                           /---------------------------------------------- (138)
                           |                                                          
                           |                                        /----- Cotton_A_21074_BGI-A2_v1.0 [Gossypium arboreum]         (7)
                           |                                   /-100+                 
                           |                                   |    \----- Cotton_A_21075_BGI-A2_v1.0 [Gossypium arboreum]         (52)
                           |                              /-99-+                      
                           |                              |    \---------- Thecc1EG042999t1 [Theobroma cacao]                      (32)
                           |                              |                           
                           |    /-----------100-----------+    /---------- Cotton_A_18661_BGI-A2_v1.0 [Gossypium arboreum]         (25)
                           |    |                         |    |                      
                           |    |                         \-100+    /----- Gh_D04G1777 [Gossypium hirsutum]                        (37)
                           |    |                              \-100+                 
                     /-100-+    |                                   \----- Gorai.012G171500.1 [Gossypium raimondii]                (39)
                     |     |    |                                                     
                     |     |    |                              /---------- Ciclev10024201m [Citrus clementina]                     (11)
                     |     |    |                              |                      
                     |     |    |                   /----100---+    /----- Ciclev10022480m [Citrus clementina]                     (67)
                     |     |    |                   |          \-88-+                 
                     |     |    |                   |               \----- orange1.1g037136m [Citrus sinensis]                     (83)
                     |     |    |                   |                                 
                     |     |    |                   |               /----- Cotton_A_39797_BGI-A2_v1.0 [Gossypium arboreum]         (15)
                     |     |    |         /----97---+          /-85-+                 
                     |     |    |         |         |          |    \----- Gh_A03G0837 [Gossypium hirsutum]                        (81)
                     |     |    |         |         |     /-100+                      
                     |     \-100+         |         |     |    |    /----- Gorai.005G136000.1 [Gossypium raimondii]                (27)
                     |          |         |         |     |    \-100+                 
                     |          |         |         \-100-+         \----- Gh_D02G1179 [Gossypium hirsutum]                        (79)
                     |          |         |               |                           
                     |          |         |               \--------------- Thecc1EG012044t1 [Theobroma cacao]                      (77)
                     |          |         |                                           
                     |          |         |                         /----- EcC062834.10 [Eucalyptus camaldulensis]                 (21)
                     |          |    /-88-+                    /-84-+                 
                     |          |    |    |                    |    \----- Eucgr.K02855.1.p [Eucalyptus grandis]                   (78)
                /-60-+          |    |    |               /-100+                      
                |    |          |    |    |               |    \---------- Eucgr.K02854.1.p [Eucalyptus grandis]                   (61)
                |    |          |    |    |         /-100-+                           
                |    |          |    |    |         |     \--------------- Eucgr.K02851.1.p [Eucalyptus grandis]                   (35)
                |    |          |    |    |    /-100+                                 
                |    |          |    |    |    |    \--------------------- Eucgr.K02849.1.p [Eucalyptus grandis]                   (80)
                |    |          \-100+    |    |                                      
                |    |               |    \-91-+                    /----- Eucgr.B00366.1.p [Eucalyptus grandis]                   (36)
                |    |               |         |               /-100+                 
                |    |               |         |               |    \----- EcC050567.10 [Eucalyptus camaldulensis]                 (55)
                |    |               |         \-------72------+                      
                |    |               |                         \---------- EcC027222.10 [Eucalyptus camaldulensis]                 (87)
                |    |               |                                                
                |    |               \------------------------------------ evm.model.supercontig_124.41 [Carica papaya]            (38)
           /-67-+    |                                                                
           |    |    |                                              /----- EcC003711.10 [Eucalyptus camaldulensis]                 (8)
           |    |    |                                         /-99-+                 
           |    |    |                                         |    \----- Eucgr.K01037.1.p [Eucalyptus grandis]                   (76)
           |    |    |                                    /-82-+                      
           |    |    |                                    |    \---------- EcS527742.10 [Eucalyptus camaldulensis]                 (10)
           |    |    |                                    |                           
           |    |    \-----------------100----------------+    /---------- Eucgr.K01039.1.p [Eucalyptus grandis]                   (14)
           |    |                                         |    |                      
      --100+    |                                         \-78-+    /----- Eucgr.K01038.1.p [Eucalyptus grandis]                   (20)
           |    |                                              \-100+                 
           |    |                                                   \----- EcC034183.10 [Eucalyptus camaldulensis]                 (44)
           |    |                                                                     
           |    \--------------------------------------------------------- evm.model.supercontig_1938.2 [Carica papaya]            (86)
           |                                                                          
           |                                                        /----- orange1.1g027547m [Citrus sinensis]                     (9)
           |                                                   /-100+                 
           |                                                   |    \----- Ciclev10016466m [Citrus clementina]                     (84)
           \-------------------------99------------------------+                      
                                                               |    /----- Neem_40269_f_1 [Azadirachta indica]                     (18)
                                                               \-100+                 
                                                                    \----- Neem_5892_f_5 [Azadirachta indica]                      (42)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Gorai.008G154300.1 [Gossypium raimondii]                (1)
      |                                                                               
      |------------------------------------------------------------------- Gh_D12G1398 [Gossypium hirsutum]                        (30)
      |                                                                               
      |                     /--------------------------------------------- (172)
      |                     |                                                         
      |                     |                                 /----------- Gh_D04G1389 [Gossypium hirsutum]                        (29)
      +                     |                      /----100---+                       
      |          /----100---+                      |          \----------- Gorai.012G127900.1 [Gossypium raimondii]                (89)
      |          |          |           /----100---+                                  
      |          |          |           |          |          /----------- Cotton_A_14914_BGI-A2_v1.0 [Gossypium arboreum]         (33)
      |          |          |           |          \----100---+                       
      |          |          \-----53----+                     \----------- Gh_A04G0887 [Gossypium hirsutum]                        (72)
      \----97----+                      |                                             
                 |                      \--------------------------------- Thecc1EG008127t2 [Theobroma cacao]                      (45)
                 |                                                                    
                 |                                            /----------- Gh_A12G1276 [Gossypium hirsutum]                        (34)
                 \---------------------57---------------------+                       
                                                              \----------- Cotton_A_04469_BGI-A2_v1.0 [Gossypium arboreum]         (73)