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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1290
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 142:
/-------------------------- KFK42538.1 [Arabis alpina] (8)
|
| /----- GSBRNA2T00150541001 [Brassica napus] (10)
| /-100+
| | \----- XP_009119702.1 [Brassica rapa] (73)
/-69-+ /-100+
| | | | /----- XP_013586129.1 [Brassica oleracea] (12)
| | | \-100+
| | /-100-+ \----- GSBRNA2T00085351001 [Brassica napus] (63)
| | | |
/-95-+ \-100+ \--------------- Rsa1.0_00425.1_g00014.1 [Raphanus sativus] (64)
| | |
| | \--------------------- Tp1g00790 [Thellungiella parvula] (86)
/-99-+ |
| | \------------------------------- Thhalv10008374m [Eutrema salsugineum] (76)
| |
| \------------------------------------ 676747540 [Sisymbrium irio] (22)
|
/-100+ /----- Araha.7761s0002.1.p [Arabidopsis halleri] (9)
| | /------100------+
| | | \----- AT1G01520.1 [Arabidopsis thaliana] (72)
| | |
| | | /---------- Csa17g001990.1 [Camelina sativa] (54)
| \--------100--------+ |
/-100-+ | /-100+ /----- Cagra.1968s0093.1.p [Capsella grandiflora] (85)
| | | | \-100+
| | \--95-+ \----- Carubv10011679m [Capsella rubella] (92)
| | |
| | \--------------- Bostr.5325s0070.1.p [Boechera stricta] (67)
| |
| \---------------------------------------------- AA1G00066 [Aethionema arabicum] (93)
|
| /----- Csa13g056520.1 [Camelina sativa] (15)
| /-95-+
| | \----- Csa08g053640.1 [Camelina sativa] (38)
| /-100+
| | \---------- Csa02g001980.1 [Camelina sativa] (57)
| /-100-+
| | | /----- Carubv10001399m [Capsella rubella] (79)
/-100+ | \---100---+
| | /-100+ \----- Cagra.6594s0025.1.p [Capsella grandiflora] (90)
| | | |
| | | \--------------------- Bostr.10064s0009.1.p [Boechera stricta] (55)
| | |
| | /---100---+ /----- Araha.6997s0009.1.p [Arabidopsis halleri] (50)
| | | | /-61-+
| | | | | \----- 864377 [Arabidopsis lyrata] (81)
| | | \------100------+
| | | \---------- AT4G01280.2 [Arabidopsis thaliana] (66)
| | |
| | | /--------------------- 676743670 [Sisymbrium irio] (17)
| | | |
| | | | /----- GSBRNA2T00123547001 [Brassica napus] (20)
| | | | /-100+
/-100+ \------100------+ /-100+ | \----- XP_013608711.1 [Brassica oleracea] (47)
| | | | | /-100+
| | | | | | | /----- XP_009111444.1 [Brassica rapa] (51)
| | | | | | \-100+
| | | | \-100-+ \----- GSBRNA2T00091220001 [Brassica napus] (84)
| | | /-96-+ |
| | | | | | /----- RrC272_p5 [Raphanus raphanistrum] (41)
| | | | | \---100---+
| | | | | \----- Rsa1.0_03191.1_g00006.1 [Raphanus sativus] (49)
--100+ | \-100+ |
| | | \-------------------------- Thhalv10028806m [Eutrema salsugineum] (48)
| | |
| | \------------------------------- Tp6g00850 [Thellungiella parvula] (75)
| |
| | /----- XP_010556573.1 [Tarenaya hassleriana] (25)
| \------------------------100------------------------+
| \----- XP_010544409.1 [Tarenaya hassleriana] (32)
|
\-------------------------------------------------------------- XP_010544757.1 [Tarenaya hassleriana] (19)
Root part of tree:
/------------------------------------------------------------------- Thecc1EG015255t1 [Theobroma cacao] (1)
|
| /----- Gh_A08G1186 [Gossypium hirsutum] (2)
| /-100+
| | \----- Cotton_A_31259_BGI-A2_v1.0 [Gossypium arboreum] (11)
| /-72-+
| | \---------- Gorai.004G159700.1 [Gossypium raimondii] (26)
| /-100-+
| | \--------------- Gh_D08G1470 [Gossypium hirsutum] (34)
| |
| /-95-+ /---------- Gh_A11G0828 [Gossypium hirsutum] (3)
| | | |
| | \----100---+ /----- Gh_D11G0971 [Gossypium hirsutum] (7)
| /-100+ \-100+
| | | \----- Gorai.007G102900.1 [Gossypium raimondii] (29)
| | |
| /-87-+ \-------------------------- Thecc1EG005269t1 [Theobroma cacao] (78)
| | |
| | | /----- Eucgr.D02320.1.p [Eucalyptus grandis] (59)
| | \-----------100-----------+
| | \----- EcC047941.10 [Eucalyptus camaldulensis] (82)
| /-86-+
| | | /----- orange1.1g019067m [Citrus sinensis] (13)
| | | /-100+
| | | | \----- Ciclev10020939m [Citrus clementina] (44)
| | \-----------100-----------+
| /-73-+ | /----- Neem_22224_f_1 [Azadirachta indica] (18)
| | | \-100+
| | | \----- Neem_1478_f_4 [Azadirachta indica] (21)
| /-100-+ |
| | | \----------------------------------------- evm.model.supercontig_184.27 [Carica papaya] (87)
| | |
| | \---------------------------------------------- (142)
| |
| | /--------------------- Thhalv10014069m [Eutrema salsugineum] (6)
| | |
| | | /----- Rsa1.0_12829.1_g00001.1 [Raphanus sativus] (28)
| | | /-100+
| | | | \----- RrC8843_p1 [Raphanus raphanistrum] (31)
| | |----100---+
| | | | /----- XP_009119808.1 [Brassica rapa] (30)
| | | \-100+
| | | \----- GSBRNA2T00007983001 [Brassica napus] (69)
| | |
| | | /----- 676736652 [Sisymbrium irio] (36)
| | |-------82------+
| | /----99---+ \----- Tp6g14830 [Thellungiella parvula] (43)
| | | |
| | | | /--------------- Rsa1.0_01570.1_g00005.1 [Raphanus sativus] (40)
| | | | |
| | | | | /----- XP_009132518.1 [Brassica rapa] (42)
| | | |-100-+ /-100+
| /-84-+ | | | | \----- GSBRNA2T00017886001 [Brassica napus] (74)
+ | | | | \-100+
| | | | | | /----- XP_013622787.1 [Brassica oleracea] (52)
| | | | | \-100+
| | | | | \----- GSBRNA2T00004307001 [Brassica napus] (77)
| | | | |
| | | /-100+ \--------------------- KFK26868.1 [Arabis alpina] (60)
| | | | |
| | | | | /----- Carubv10026677m [Capsella rubella] (14)
| | | | | /------100------+
| | | | | | \----- Cagra.0084s0014.1.p [Capsella grandiflora] (39)
| | | | | |
| | | | | | /---------- Csa02g048880.1 [Camelina sativa] (33)
| | | | | /-84-+ |
| | | | | | | /-100+ /----- Csa11g084480.1 [Camelina sativa] (46)
| | | | | | | | \-62-+
| | | /-100+ | | \--87-+ \----- Csa18g023620.1 [Camelina sativa] (61)
| | | | | | | |
| /-71-+ | | | \-100+ \--------------- Bostr.7305s0060.1.p [Boechera stricta] (58)
| | | | | | |
| | | | | | | /----- 885383 [Arabidopsis lyrata] (24)
| | | | | | | |
| | | | | | \---------100--------+----- AT5G52660.2 [Arabidopsis thaliana] (62)
| | | \----100---+ | |
| | | | | \----- Araha.14397s0002.1.p [Arabidopsis halleri] (89)
| | | | |
| | | | \------------------------------------ AA77G00007 [Aethionema arabicum] (35)
| | | |
| | | | /----- XP_010555684.1 [Tarenaya hassleriana] (27)
|-100+ | | |
| | | \----------------100----------------+----- XP_010521356.1 [Tarenaya hassleriana] (80)
| | | |
| | | \----- XP_010537145.1 [Tarenaya hassleriana] (88)
| | |
| | | /---------- Neem_3772_f_2 [Azadirachta indica] (4)
| | | |
| | \----------------------100---------------------+ /----- Ciclev10005411m [Citrus clementina] (16)
| | \-100+
| | \----- orange1.1g020389m [Citrus sinensis] (65)
| |
| \-------------------------------------------------------------- Eucgr.A02733.1.p [Eucalyptus grandis] (68)
|
| /----- Gh_A09G0416 [Gossypium hirsutum] (37)
|-----------------------------100-----------------------------+
| \----- Cotton_A_40094_BGI-A2_v1.0 [Gossypium arboreum] (56)
|
| /----- Gh_D12G2435 [Gossypium hirsutum] (5)
| /-92-+
| | \----- Gorai.008G274500.1 [Gossypium raimondii] (91)
| /-100+
| | | /----- Cotton_A_01283_BGI-A2_v1.0 [Gossypium arboreum] (23)
| | \-80-+
| | \----- Gh_A12G2299 [Gossypium hirsutum] (45)
\-------------------------72------------------------+
| /----- Gorai.007G013200.1 [Gossypium raimondii] (53)
| /-73-+
| | \----- Gh_D11G0117 [Gossypium hirsutum] (83)
\-100+
| /----- Cotton_A_02413_BGI-A2_v1.0 [Gossypium arboreum] (70)
\-88-+
\----- Gh_A11G0102 [Gossypium hirsutum] (71)
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