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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1355
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 160:
/----- XP_013584762.1 [Brassica oleracea] (2)
/---100---+
| \----- GSBRNA2T00031996001 [Brassica napus] (71)
|
/-100-+ /----- GSBRNA2T00087993001 [Brassica napus] (49)
| | /-99-+
| | | \----- XP_009119085.1 [Brassica rapa] (91)
| \-59-+
/-100+ | /----- RrC378_p8 [Raphanus raphanistrum] (62)
| | \-98-+
| | \----- Rsa1.0_00773.1_g00001.1 [Raphanus sativus] (82)
/-100+ |
| | \--------------------- 676760524 [Sisymbrium irio] (29)
| |
/-100+ \-------------------------- Tp1g04980 [Thellungiella parvula] (72)
| |
| \------------------------------- Thhalv10009992m [Eutrema salsugineum] (30)
|
| /----- Araha.8855s0002.1.p [Arabidopsis halleri] (5)
| /-100+
/-100+ | \----- 333922 [Arabidopsis lyrata] (16)
| | /----100---+
| | | \---------- AT1G06170.1 [Arabidopsis thaliana] (85)
| | |
| | | /----- Cagra.1671s0248.1.p [Capsella grandiflora] (7)
| \------100-----+ /---100---+
| | | \----- Carubv10009189m [Capsella rubella] (60)
| | |
/-100+ \--93-+ /----- Csa17g009590.1 [Camelina sativa] (18)
| | | /-100+
| | | | \----- Csa14g007560.1 [Camelina sativa] (58)
| | \-89-+
| | \---------- Bostr.25219s0340.1.p [Boechera stricta] (39)
| |
| |----------------------------------------- KFK42944.1 [Arabis alpina] (45)
| |
| \----------------------------------------- AA23G00016 [Aethionema arabicum] (55)
|
| /----- Csa16g012400.1 [Camelina sativa] (3)
| /-100+
| | \----- Csa07g011670.1 [Camelina sativa] (31)
| /-100+
| | \---------- Csa05g030080.1 [Camelina sativa] (8)
| /-100-+
| | | /----- Cagra.6952s0001.1.p [Capsella grandiflora] (25)
| | \---100---+
| /-80-+ \----- Carubv10023056m [Capsella rubella] (53)
| | |
| | \--------------------- Bostr.24513s0102.1.p [Boechera stricta] (41)
| /-54-+
/--51-+ | | /----- AT2G31220.1 [Arabidopsis thaliana] (19)
| | | \---------77---------+
| | | \----- 482049 [Arabidopsis lyrata] (44)
| | |
| | | /----- Tp4g13710 [Thellungiella parvula] (6)
| | | /---------87---------+
| | | | \----- Thhalv10016616m [Eutrema salsugineum] (69)
| | | |
| | /-53-+ | /----- GSBRNA2T00048621001 [Brassica napus] (15)
| | | | | /-100+
| | | | | | \----- XP_009144238.1 [Brassica rapa] (23)
| | | | | /-100+
| | | | | | | /----- XP_013633827.1 [Brassica oleracea] (59)
| | | | | | \-100+
| | | | | /-100-+ \----- GSBRNA2T00027161001 [Brassica napus] (95)
| | | | | | |
| | | | | | | /----- Rsa1.0_03925.1_g00002.1 [Raphanus sativus] (46)
| | | \-99-+ | \---100---+
| | | |-100+ \----- RrC8172_p2 [Raphanus raphanistrum] (66)
/-53-+ | | | |
| | | | | | /----- 676710090 [Sisymbrium irio] (43)
| | | | | \------100------+
| | \----54---+ | \----- 676710062 [Sisymbrium irio] (89)
| | | |
| | | | /----- RrC9511_p3 [Raphanus raphanistrum] (24)
| | | | /-100+
| | | | | \----- Rsa1.0_00496.1_g00004.1 [Raphanus sativus] (47)
| | | | |
| | | | | /----- XP_013634648.1 [Brassica oleracea] (35)
| | | \------100------+-100+
| | | | \----- GSBRNA2T00085729001 [Brassica napus] (70)
| | | |
| | | | /----- GSBRNA2T00020547001 [Brassica napus] (86)
| | | \-100+
| | | \----- XP_009141141.1 [Brassica rapa] (87)
| | |
| | \------------------------------------ AA32G00604 [Aethionema arabicum] (38)
| |
| \---------------------------------------------------- XP_010522155.1 [Tarenaya hassleriana] (13)
|
| /----- Neem_38851_f_1 [Azadirachta indica] (4)
| /-100+
| | \----- Neem_10870_f_2 [Azadirachta indica] (96)
| /-100+
| | | /----- Neem_10870_f_3 [Azadirachta indica] (52)
| | \-100+
| /--97-+ \----- Neem_35989_f_1 [Azadirachta indica] (74)
/-51-+ | |
| | | | /----- Ciclev10019669m [Citrus clementina] (9)
| | | \---100---+
| | /-----------100----------+ \----- orange1.1g009555m [Citrus sinensis] (32)
| | | |
| | | | /----- Ciclev10006940m [Citrus clementina] (65)
| | | \------100------+
| | | \----- orange1.1g043851m [Citrus sinensis] (67)
| | |
| | | /--------------------- Gh_D06G1740 [Gossypium hirsutum] (11)
| | | |
| | | | /----- Cotton_A_13783_BGI-A2_v1.0 [Gossypium arboreum] (36)
| | | | /-99-+
| | | /-99-+ | \----- Cotton_A_13785_BGI-A2_v1.0 [Gossypium arboreum] (78)
| | | | | /-100+
| | | | | | \---------- Gh_A06G1396 [Gossypium hirsutum] (50)
| | | | \-100-+
| | /-100-+ /-100+ | /----- Gh_A06G1395 [Gossypium hirsutum] (51)
| | | | | | \---100---+
| | | | | | \----- Cotton_A_13784_BGI-A2_v1.0 [Gossypium arboreum] (83)
--50-+ | | | | |
| | | | /-100+ \-------------------------- Gorai.010G191900.1 [Gossypium raimondii] (37)
| | | | | |
| | | | | | /----- Gh_D06G1739 [Gossypium hirsutum] (42)
| | | | | \-----------100-----------+
| | | | | \----- Gorai.010G191800.1 [Gossypium raimondii] (57)
| | | | /-97-+
| \-99-+ | | | /----- Gorai.012G081100.1 [Gossypium raimondii] (17)
| | | | | /-100+
| | | | | | \----- Gh_D04G0689 [Gossypium hirsutum] (54)
| | \-100+ \-----------100-----------+
| | | \---------- Cotton_A_30832_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | |
| | \----------------------------------------- Thecc1EG042366t1 [Theobroma cacao] (90)
| |
| | /----- Eucgr.E04246.1.p [Eucalyptus grandis] (22)
| \----------------------100---------------------+
| \----- Eucgr.E04247.1.p [Eucalyptus grandis] (63)
|
\-------------------------------------------------------------- Araha.4530s0003.1.p [Arabidopsis halleri] (27)
Root part of tree:
/------------------------------------------------------------------- Bostr.24513s0104.1.p [Boechera stricta] (1)
|
| /------- (160)
| /-------------------------100------------------------+
| | \------- XP_010543057.1 [Tarenaya hassleriana] (28)
| |
| | /------- GSBRNA2T00085730001 [Brassica napus] (10)
| | /-100-+
| | | \------- GSBRNA2T00020545001 [Brassica napus] (34)
| | /--100-+
| | | \------------- XP_009141140.1 [Brassica rapa] (84)
| | /--100-+
| | | | /------- XP_013634977.1 [Brassica oleracea] (75)
| | | \-----100----+
| | /-100-+ \------- GSBRNA2T00085731001 [Brassica napus] (92)
| | | |
| | | | /------- Rsa1.0_00496.1_g00005.1 [Raphanus sativus] (64)
| | | \--------100--------+
| | | \------- RrC9511_p2 [Raphanus raphanistrum] (77)
| | /--58--+
| | | | /------- GSBRNA2T00027163001 [Brassica napus] (33)
| | | | /-100-+
| | | | | \------- XP_013635096.1 [Brassica oleracea] (68)
|--100-+ /--99--+ \--------100--------+
| | | | \------------- GSBRNA2T00048622001 [Brassica napus] (79)
+ | | |
| | | | /------- 676710094 [Sisymbrium irio] (56)
| | /--100-+ \---------------100--------------+
| | | | \------- 676710066 [Sisymbrium irio] (81)
| | | |
| | | \----------------------------------------------- Tp4g13700 [Thellungiella parvula] (61)
| | |
| |--74-+------------------------------------------------------ Thhalv10017830m [Eutrema salsugineum] (14)
| | |
| | | /------------- Thhalv10017908m [Eutrema salsugineum] (20)
| | | |
| | \-------------------74-------------------+ /------- 676710064 [Sisymbrium irio] (88)
| | \-100-+
| | \------- 676710092 [Sisymbrium irio] (94)
| |
| | /------------- AT2G31210.1 [Arabidopsis thaliana] (26)
| | |
| \----------------------97----------------------+ /------- Araha.4530s0002.1.p [Arabidopsis halleri] (73)
| \-100-+
| \------- 482048 [Arabidopsis lyrata] (76)
|
| /------- Cagra.7286s0012.1.p [Capsella grandiflora] (12)
| /-----100----+
| | \------- Carubv10023260m [Capsella rubella] (40)
| |
\----------------------100---------------------+ /------- Csa16g012410.1 [Camelina sativa] (48)
| /--99-+
| | \------- Csa07g011680.1 [Camelina sativa] (93)
\--100-+
\------------- Csa05g030090.1 [Camelina sativa] (80)
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