![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1534
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 149:
/----- Tp2g14270 [Thellungiella parvula] (2)
/-------99------+
| \----- 676750298 [Sisymbrium irio] (84)
|
| /----- XP_009152200.1 [Brassica rapa] (16)
| /-100+
/-74-+ | \----- GSBRNA2T00081590001 [Brassica napus] (88)
| | /-100+
| | | | /----- XP_013596079.1 [Brassica oleracea] (57)
| | | \-100+
| \-100-+ \----- GSBRNA2T00115304001 [Brassica napus] (76)
| |
| | /----- RrC1038_p2 [Raphanus raphanistrum] (62)
/-100+ \---100---+
| | \----- Rsa1.0_01016.1_g00022.1 [Raphanus sativus] (65)
| |
| | /----- GSBRNA2T00063487001 [Brassica napus] (25)
| | /---100---+
| | | \----- XP_013616172.1 [Brassica oleracea] (33)
| | |
| \----100---+ /----- XP_009129095.1 [Brassica rapa] (60)
/-99-+ | /-100+
| | | | \----- GSBRNA2T00011734001 [Brassica napus] (77)
| | \-50-+
| | | /----- RrC21319_p1 [Raphanus raphanistrum] (70)
| | \-100+
| | \----- Rsa1.0_02766.1_g00006.1 [Raphanus sativus] (90)
| |
| \------------------------------- Thhalv10004015m [Eutrema salsugineum] (64)
|
/-100+ /----- Carubv10017039m [Capsella rubella] (3)
| | /---100---+
| | | \----- Cagra.0391s0009.1.p [Capsella grandiflora] (80)
| | |
| | /-100-+ /---------- Csa09g005670.1 [Camelina sativa] (15)
| | | | |
| | | \-100+ /----- Csa06g004330.1 [Camelina sativa] (20)
| | | \-100+
| | | \----- Csa04g008890.1 [Camelina sativa] (45)
/---------100--------+ \------100-----+
| | | /--------------- Bostr.0556s0160.1.p [Boechera stricta] (32)
| | | |
| | | | /----- 484242 [Arabidopsis lyrata] (35)
| | \--93-+ /-100+
| | | | \----- Araha.14782s0006.1.p [Arabidopsis halleri] (87)
| | \-100+
| | \---------- AT2G03340.1 [Arabidopsis thaliana] (66)
| |
| \----------------------------------------- AA53G00752 [Aethionema arabicum] (53)
|
| /----- XP_010523478.1 [Tarenaya hassleriana] (4)
| /-55-+
| | \----- XP_010527942.1 [Tarenaya hassleriana] (85)
| /----------------------93----------------------+
| | \---------- XP_010554301.1 [Tarenaya hassleriana] (22)
| |
| | /----- Cotton_A_18314_BGI-A2_v1.0 [Gossypium arboreum] (5)
| | /-100+
| | | \----- Gh_A05G3186 [Gossypium hirsutum] (19)
| | /----100---+
--100+ | | | /----- Gh_D04G0418 [Gossypium hirsutum] (7)
| | | \-100+
| | | \----- Gorai.012G051500.1 [Gossypium raimondii] (29)
| | |
| | | /----- Gorai.006G013300.1 [Gossypium raimondii] (9)
| | | /-100+
| | /-100+ | \----- Gh_D09G0113 [Gossypium hirsutum] (11)
| | | | /-100+
| | | | | | /----- Cotton_A_22072_BGI-A2_v1.0 [Gossypium arboreum] (49)
| | | | | \-100+
| | | | | \----- Gh_A09G0118 [Gossypium hirsutum] (92)
| | | | |
| | | | | /----- Gorai.001G241200.1 [Gossypium raimondii] (50)
| | | \--59-+ /-100+
| | /-100+ | | \----- Gh_D07G2107 [Gossypium hirsutum] (58)
| | | | |-100+
| | | | | \---------- Gh_A07G1892 [Gossypium hirsutum] (68)
| | | | |
| | | | \--------------- Thecc1EG018667t1 [Theobroma cacao] (59)
| | /-100+ |
| | | | | /----- orange1.1g010802m [Citrus sinensis] (6)
\-100+ | | \---------100--------+
| | | \----- Neem_435_f_4 [Azadirachta indica] (91)
| | |
| /-99-+ \------------------------------- Eucgr.I01998.1.p [Eucalyptus grandis] (83)
| | |
| | | /----- Eucgr.B03189.1.p [Eucalyptus grandis] (14)
| | | /-100+
| | | | \----- EcS710815.10 [Eucalyptus camaldulensis] (41)
| | \------------88-----------+
| /-98-+ \---------- Eucgr.G02469.1.p [Eucalyptus grandis] (23)
| | |
| | | /----- Neem_11232_f_2 [Azadirachta indica] (13)
| | | /-100+
| | | | \----- Neem_19819_f_1 [Azadirachta indica] (40)
| | \--------------100-------------+
| | | /----- Ciclev10031225m [Citrus clementina] (17)
| | \-100+
| | \----- orange1.1g009051m [Citrus sinensis] (79)
| |
| /--98-+ /----- Gh_D04G1896 [Gossypium hirsutum] (27)
| | | /-100+
| | | | \----- Gorai.012G186000.1 [Gossypium raimondii] (74)
| | | /-100+
| | | | | /----- Gh_A04G1269 [Gossypium hirsutum] (30)
| | | | \-100+
| | | /--96-+ \----- Cotton_A_11750_BGI-A2_v1.0 [Gossypium arboreum] (47)
| | | | |
| | | | \--------------- Thecc1EG011624t1 [Theobroma cacao] (48)
\-100+ | |
| \-----------100----------+ /----- Cotton_A_26644_BGI-A2_v1.0 [Gossypium arboreum] (34)
| | /-100+
| | | \----- Gh_A13G0696 [Gossypium hirsutum] (55)
| \----100---+
| | /----- Gh_D13G0820 [Gossypium hirsutum] (38)
| \-100+
| \----- Gorai.013G090200.1 [Gossypium raimondii] (56)
|
\---------------------------------------------------- evm.model.supercontig_1.76 [Carica papaya] (31)
Subtree rooted at node 175:
/----- (149)
/----------------------100---------------------+
| \----- AA14G00003 [Aethionema arabicum] (44)
|
| /----- GSBRNA2T00090545001 [Brassica napus] (10)
| /-100+
| | \----- XP_013604490.1 [Brassica oleracea] (42)
| /-100+
| | | /----- XP_009117949.1 [Brassica rapa] (63)
| | \-100+
| /------100------+ \----- GSBRNA2T00055208001 [Brassica napus] (89)
| | |
| | | /----- Rsa1.0_03486.1_g00004.1 [Raphanus sativus] (24)
| | \---100---+
| | \----- RrC4028_p2 [Raphanus raphanistrum] (75)
| |
| | /--------------- XP_013587047.1 [Brassica oleracea] (12)
| | |
| /-59-+ | /----- GSBRNA2T00105528001 [Brassica napus] (28)
| | | /-100-+ /-100+
/-99-+ | | | | | \----- GSBRNA2T00062034001 [Brassica napus] (71)
| | | | | \-86-+
| | | | /-99-+ \---------- XP_009148678.1 [Brassica rapa] (72)
| | | | | |
| | /-56-+ | | | /----- RrC252_p6 [Raphanus raphanistrum] (26)
| | | | \-59-+ \------100------+
| | | | | \----- Rsa1.0_00825.1_g00014.1 [Raphanus sativus] (61)
| | | | |
| | | | \-------------------------- 676759968 [Sisymbrium irio] (43)
| | | |
| | | \------------------------------------ Tp1g12320 [Thellungiella parvula] (52)
| | /-99-+
| | | | /----- XP_013600595.1 [Brassica oleracea] (18)
| | | | /-100+
/-99-+ | | | | \----- GSBRNA2T00036069001 [Brassica napus] (81)
| | | | | /-100+
| | | | | | | /----- GSBRNA2T00103117001 [Brassica napus] (36)
| | | | | | \-100+
| | \--99-+ \-----------100-----------+ \----- XP_009110565.1 [Brassica rapa] (39)
| | | |
| | | | /----- Rsa1.0_02672.1_g00006.1 [Raphanus sativus] (21)
| | | \---100---+
| | | \----- RrC824_p3 [Raphanus raphanistrum] (73)
--99-+ | |
| | \---------------------------------------------- Thhalv10007428m [Eutrema salsugineum] (54)
| |
| | /---------- AT1G13960.1 [Arabidopsis thaliana] (37)
| | |
| \----------------------100---------------------+ /----- 471557 [Arabidopsis lyrata] (46)
| \-100+
| \----- 884549 [Arabidopsis lyrata] (51)
|
\-------------------------------------------------------------- Bostr.13671s0059.1.p [Boechera stricta] (8)
Root part of tree:
/------------------------------------------------------------------- Carubv10008859m [Capsella rubella] (1)
|
|------------------------------------------------------------------- Cagra.3501s0106.1.p [Capsella grandiflora] (78)
|
+ /------------------------------------------------------ (175)
| |
| | /--------------------------- Csa03g017700.1 [Camelina sativa] (67)
\-----100----+ |
| /-----63-----+ /------------- Csa17g019340.1 [Camelina sativa] (69)
| | \------98-----+
\------99-----+ \------------- Csa21393s010.1 [Camelina sativa] (86)
|
\---------------------------------------- Csa14g016930.1 [Camelina sativa] (82)
|




