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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1549
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 154:
/----- Rsa1.0_00123.1_g00012.1 [Raphanus sativus] (3)
/---100---+
| \----- RrC3673_p2 [Raphanus raphanistrum] (44)
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/------100------+ /----- XP_013606952.1 [Brassica oleracea] (40)
| | /-100+
| | | \----- GSBRNA2T00106914001 [Brassica napus] (63)
| \-100+
| | /----- XP_009122122.1 [Brassica rapa] (53)
| \-99-+
| \----- XP_013587407.1 [Brassica oleracea] (66)
|
| /----- XP_009130860.1 [Brassica rapa] (27)
| /-100+
| | \----- GSBRNA2T00004958001 [Brassica napus] (86)
| /-100+
/-93-+ | | /----- XP_013627045.1 [Brassica oleracea] (87)
| | | \-99-+
| | /-100-+ \----- GSBRNA2T00134354001 [Brassica napus] (88)
| | | |
| | | | /----- Rsa1.0_04387.1_g00002.1 [Raphanus sativus] (47)
| | /-97-+ \---100---+
| | | | \----- RrC151_p7 [Raphanus raphanistrum] (69)
| | | |
| |-55-+ \--------------------- Thhalv10014387m [Eutrema salsugineum] (58)
| | |
| | \-------------------------- Tp6g37740 [Thellungiella parvula] (59)
| |
| \------------------------------- 676744648 [Sisymbrium irio] (49)
|
/-100+ /----- Csa13g007080.1 [Camelina sativa] (10)
| | /-50-+
| | | \----- Csa20g006320.1 [Camelina sativa] (73)
| | /-100+
| | | \---------- Csa08g059360.1 [Camelina sativa] (34)
| | |
| | /--99-+ /---------- Bostr.13129s0456.1.p [Boechera stricta] (35)
| | | | |
| | | \-84-+ /----- Carubv10003130m [Capsella rubella] (75)
| | | \-100+
/-74-+ | /-100+ \----- Cagra.1504s0014.1.p [Capsella grandiflora] (91)
| | | | |
| | | | | /---------- AT5G05090.1 [Arabidopsis thaliana] (68)
| | | | | |
| | \----86---+ \----100---+ /----- Araha.2901s0005.1.p [Arabidopsis halleri] (70)
| | | \-97-+
| | | \----- 908412 [Arabidopsis lyrata] (80)
| | |
| | \-------------------------- KFK26110.1 [Arabis alpina] (67)
| |
| \----------------------------------------- AA12G00221 [Aethionema arabicum] (28)
|
| /----- Csa01g011690.1 [Camelina sativa] (7)
| /-99-+
| | \----- Csa15g014310.1 [Camelina sativa] (52)
| /-100+
| | \---------- Csa19g014440.1 [Camelina sativa] (14)
| |
| | /----- Carubv10024931m [Capsella rubella] (11)
| /--93-+ /-100+
| | | | \----- Cagra.0995s0002.1.p [Capsella grandiflora] (77)
| | | |
| | \-90-+---------- Bostr.19424s0999.1.p [Boechera stricta] (12)
| | |
| | | /----- Carubv10014134m [Capsella rubella] (21)
|-----------90-----------+ \-84-+
| | \----- Cagra.0834s0003.1.p [Capsella grandiflora] (32)
| |
| | /----- 897268 [Arabidopsis lyrata] (16)
| | /-50-+
| | | \----- Araha.2506s0007.1.p [Arabidopsis halleri] (33)
| \----97----+
| \---------- AT3G10760.1 [Arabidopsis thaliana] (23)
/-100-+
| | /----- Thhalv10021133m [Eutrema salsugineum] (13)
| |-------------------98-------------------+
| | \----- Tp3g09090 [Thellungiella parvula] (60)
| |
| | /----- XP_013617928.1 [Brassica oleracea] (30)
| | |
| | /-99-+----- RrC15320_p1 [Raphanus raphanistrum] (72)
| | | |
| | | \----- XP_009122638.1 [Brassica rapa] (82)
| | /----97----+
| | | | /----- GSBRNA2T00060239001 [Brassica napus] (79)
| | | \-100+
| | | \----- Rsa1.0_00110.1_g00030.1 [Raphanus sativus] (90)
| | |
| | | /----- GSBRNA2T00110982001 [Brassica napus] (31)
| |-----------74-----------+ /-100+
| | | | \----- XP_013583855.1 [Brassica oleracea] (46)
| | | /-89-+
| | | | | /----- XP_009146808.1 [Brassica rapa] (39)
| | | | \-63-+
| | \-100-+ \----- GSBRNA2T00000369001 [Brassica napus] (51)
| | |
| | | /----- Rsa1.0_01591.1_g00018.1 [Raphanus sativus] (65)
| | \---100---+
| | \----- RrC1282_p10 [Raphanus raphanistrum] (78)
| |
/-96-+ | /----- XP_010558117.1 [Tarenaya hassleriana] (56)
| | |-------------------94-------------------+
| | | \----- XP_010552902.1 [Tarenaya hassleriana] (71)
| | |
| | |---------------------------------------------- 676765018 [Sisymbrium irio] (64)
| | |
| | \---------------------------------------------- AA93G00265 [Aethionema arabicum] (85)
| |
| | /----- Gh_D11G3348 [Gossypium hirsutum] (4)
| | /-100+
| | | \----- Gorai.007G351500.1 [Gossypium raimondii] (25)
| | /-100+
| | | | /----- Gh_A11G2737 [Gossypium hirsutum] (17)
| | | \-85-+
| | | \----- Cotton_A_14304_BGI-A2_v1.0 [Gossypium arboreum] (43)
| | |
| | | /----- Cotton_A_15322_BGI-A2_v1.0 [Gossypium arboreum] (6)
| | /-100-+ |
/-100+ | | | |----- Gorai.002G230800.1 [Gossypium raimondii] (24)
| | | | | /-100+
| | | | | | |----- Gh_D01G1929 [Gossypium hirsutum] (54)
| | | | | | |
| | | /-97-+ \-100+ \----- Gh_A01G1680 [Gossypium hirsutum] (76)
| | | | | |
| | | | | \---------- Thecc1EG045790t1 [Theobroma cacao] (8)
| | | | |
| | \------------99-----------+ \--------------------- evm.model.supercontig_92.70 [Carica papaya] (45)
| | |
| | | /----- Eucgr.K01670.1.p [Eucalyptus grandis] (48)
--100+ | \---------100--------+
| | \----- Eucgr.A02201.1.p [Eucalyptus grandis] (89)
| |
| | /----- orange1.1g020690m [Citrus sinensis] (9)
| | /-100+
| | | \----- Ciclev10012203m [Citrus clementina] (74)
| \----------------------100---------------------+
| \---------- Neem_672_f_3 [Azadirachta indica] (20)
|
|-------------------------------------------------------------- AA61G00131 [Aethionema arabicum] (19)
|
\-------------------------------------------------------------- XP_010554998.1 [Tarenaya hassleriana] (61)
Root part of tree:
/------------------------------------------------------------------- Tp4g23290 [Thellungiella parvula] (1)
|
| /-------- RrC11530_p1 [Raphanus raphanistrum] (2)
| /-------100------+
| | \-------- Rsa1.0_00183.1_g00024.1 [Raphanus sativus] (29)
| |
| /---------------100---------------+ /-------- GSBRNA2T00011219001 [Brassica napus] (15)
| | | /---100--+
| | | | \-------- XP_013634583.1 [Brassica oleracea] (22)
| | \--100--+
| | | /-------- XP_009142716.1 [Brassica rapa] (26)
| | \---100--+
| | \-------- GSBRNA2T00132825001 [Brassica napus] (83)
| |
| | /-------- (154)
|---66--+ /---100--+
| | | \-------- AA93G00022 [Aethionema arabicum] (42)
| | /---------------70---------------+
| | | \----------------- KFK42319.1 [Arabis alpina] (5)
| | |
+ | | /------------------------------------------ Bostr.27991s0013.1.p [Boechera stricta] (18)
| | | |
| | | | /-------- Csa04g055390.1 [Camelina sativa] (37)
| \---100--+ | /---86---+
| | | | \-------- Csa05g011700.1 [Camelina sativa] (50)
| | | /---80--+
| | | | \----------------- Csa06g046850.1 [Camelina sativa] (38)
| | | /---69--+
| \---99--+ | | /-------- Cagra.1642s0062.1.p [Capsella grandiflora] (55)
| | | \-------100------+
| |---62---+ \-------- Carubv10024859m [Capsella rubella] (57)
| | |
| | \--------------------------------- Bostr.9345s0035.1.p [Boechera stricta] (84)
| |
| |------------------------------------------ 903400 [Arabidopsis lyrata] (41)
| |
| \------------------------------------------ AT2G40970.1 [Arabidopsis thaliana] (81)
|
| /-------- Thhalv10017945m [Eutrema salsugineum] (36)
\----------------------------60----------------------------+
\-------- 676735758 [Sisymbrium irio] (62)
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