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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1563
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 147:
/----- Csa10g027960.1 [Camelina sativa] (2)
/-100+
| \----- Csa11g031260.1 [Camelina sativa] (81)
/-58-+
| | /----- Cagra.3356s0035.1.p [Capsella grandiflora] (5)
| \-59-+
/--76-+ \----- Carubv10005434m [Capsella rubella] (14)
| |
| \--------------- Csa12g048260.1 [Camelina sativa] (10)
|
/------66------+--------------------- AT4G17460.1 [Arabidopsis thaliana] (6)
| |
| | /----- Bostr.30275s0201.1.p [Boechera stricta] (17)
| \-------99------+
| \----- 914971 [Arabidopsis lyrata] (29)
|
| /------------------------------- Tp7g16730 [Thellungiella parvula] (3)
| |
| | /-------------------------- KFK24548.1 [Arabis alpina] (20)
| | |
| | | /----- RrC6257_p2 [Raphanus raphanistrum] (23)
/-100+ | | /---100---+
| | | | | \----- Rsa1.0_01949.1_g00003.1 [Raphanus sativus] (36)
| | | | |
| | | |----100---+ /----- GSBRNA2T00151088001 [Brassica napus] (33)
| | | | | /-100+
| | | | | | \----- XP_009136844.1 [Brassica rapa] (76)
| | | | \-100+
| | | | | /----- XP_013595686.1 [Brassica oleracea] (34)
| | | | \-100+
| | |-58-+ \----- GSBRNA2T00031269001 [Brassica napus] (62)
| \-96-+ |
| | | /----- XP_013637658.1 [Brassica oleracea] (38)
| | | /-100+
| | | | \----- GSBRNA2T00003439001 [Brassica napus] (72)
/-------97------+ | | |
| | | | /-100+---------- XP_009144501.1 [Brassica rapa] (49)
| | | | | |
| | | | | \---------- GSBRNA2T00058728001 [Brassica napus] (79)
| | | | /-100-+
| | | | | | /----- Rsa1.0_00326.1_g00023.1 [Raphanus sativus] (70)
| | | | | \---100---+
| | | \-97-+ \----- RrC5602_p1 [Raphanus raphanistrum] (84)
| | | |
| | | \--------------------- 676728430 [Sisymbrium irio] (66)
| | |
| | \------------------------------- Thhalv10025921m [Eutrema salsugineum] (55)
| |
| \----------------------------------------- AA57G00018 [Aethionema arabicum] (27)
|
| /----- Gh_D08G1807 [Gossypium hirsutum] (4)
| /-99-+
| | \----- Gorai.004G195900.1 [Gossypium raimondii] (67)
| /------100------+
| | | /----- Gh_A08G1509 [Gossypium hirsutum] (28)
| | \-100+
| | \----- Cotton_A_26317_BGI-A2_v1.0 [Gossypium arboreum] (35)
| |
| | /---------- Gh_D12G2139 [Gossypium hirsutum] (8)
| | |
| /-80-+ /-67-+ /----- Gh_A12G1960 [Gossypium hirsutum] (53)
| | | | \-99-+
| | | /-100-+ \----- Cotton_A_07152_BGI-A2_v1.0 [Gossypium arboreum] (83)
| | | | |
| | | | \--------------- Gorai.008G233200.1 [Gossypium raimondii] (50)
| | | |
| | \-81-+ /----- Gorai.007G029200.1 [Gossypium raimondii] (24)
| /-99-+ | /-100+
| | | | | \----- Gh_D11G0266 [Gossypium hirsutum] (64)
| | | \----100---+
| | | | /----- Gh_A11G2970 [Gossypium hirsutum] (58)
| | | \-100+
| | | \----- Cotton_A_09138_BGI-A2_v1.0 [Gossypium arboreum] (82)
/-100+ /-56-+ |
| | | | \------------------------------- Thecc1EG015919t1 [Theobroma cacao] (18)
| | | |
| | | | /---------- Ciclev10021374m [Citrus clementina] (51)
| | | | |
| | /-53-+ \------------70-----------+ /----- Eucgr.E00400.1.p [Eucalyptus grandis] (73)
| | | | \-68-+
| | | | \----- Neem_1266_f_5 [Azadirachta indica] (77)
| | | |
| | | \----------------------------------------- evm.model.supercontig_89.64 [Carica papaya] (43)
| | |
| | | /----- AT4G16780.1 [Arabidopsis thaliana] (12)
| | | /-99-+
| | | | \----- Araha.49827s0001.1.p [Arabidopsis halleri] (32)
| | | /-80-+
| | | | \---------- KFK22263.1 [Arabis alpina] (13)
| | | /--82-+
| | | | \--------------- Bostr.30275s0139.1.p [Boechera stricta] (78)
| | | |
| | | | /---------- Csa11g032920.1 [Camelina sativa] (16)
| | | /-74-+ |
| | | | | /-100+ /----- Csa12g050930.1 [Camelina sativa] (31)
| | | | | | \-97-+
| | | | | | \----- Csa10g028730.1 [Camelina sativa] (46)
| | | | \-100-+
| | /-100-+ | | /----- Cagra.0812s0021.1.p [Capsella grandiflora] (65)
| | | | | \---100---+
--84-+ | | | | \----- Carubv10005275m [Capsella rubella] (89)
| | | | |
| | | | /-100+ /---------- XP_009145468.1 [Brassica rapa] (15)
| | | | | | |
| | | | | | |---------- XP_013610091.1 [Brassica oleracea] (61)
| | | | | | /-100+
| | | | | | | | /----- Rsa1.0_00235.1_g00008.1 [Raphanus sativus] (63)
| | | | | | | \-100+
| | | | | | /--82-+ \----- RrC9430_p1 [Raphanus raphanistrum] (74)
| | | | /-100+ | | |
| | | | | | | | \--------------- 676788896 [Sisymbrium irio] (85)
| \-99-+ | | | \-100+
| | | | | | /----- Tp7g17330 [Thellungiella parvula] (26)
| | | | | \-------53------+
| | | /-100+ | \----- Thhalv10025903m [Eutrema salsugineum] (87)
| | | | | |
| | | | | \------------------------------- AA53G00281 [Aethionema arabicum] (42)
| | | | |
| | \-66-+ | /----- XP_010538408.1 [Tarenaya hassleriana] (41)
| | | \--------------82--------------+
| | | \----- XP_010531658.1 [Tarenaya hassleriana] (68)
| | |
| | \----------------------------------------- Eucgr.D02105.1.p [Eucalyptus grandis] (71)
| |
| \---------------------------------------------------- XP_010529979.1 [Tarenaya hassleriana] (19)
|
\-------------------------------------------------------------- AA251G00004 [Aethionema arabicum] (7)
Subtree rooted at node 169:
/----- (147)
/--------------85--------------+
| \----- KFK31383.1 [Arabis alpina] (47)
|
| /----- Carubv10026931m [Capsella rubella] (9)
| /---100---+
| | \----- Cagra.7985s0003.1.p [Capsella grandiflora] (54)
| |
| /--74-+ /----- Csa11g064380.1 [Camelina sativa] (30)
/-94-+ | | /-100+
| | | | | \----- Csa18g002440.1 [Camelina sativa] (37)
| | /-83-+ \-99-+
| | | | \---------- Csa20g081840.1 [Camelina sativa] (44)
| | | |
| | /-77-+ \--------------------- Bostr.14419s0034.1.p [Boechera stricta] (80)
| | | |
/-93-+ | | \-------------------------- AT5G47370.1 [Arabidopsis thaliana] (69)
| | \-83-+
| | | /----- Araha.0879s0003.1.p [Arabidopsis halleri] (45)
| | \-----------100-----------+
| | \----- 494245 [Arabidopsis lyrata] (56)
| |
| \----------------------------------------- Thhalv10000990m [Eutrema salsugineum] (57)
/--70-+
| | /----- GSBRNA2T00033492001 [Brassica napus] (39)
| | /-100+
| | | \----- XP_013609037.1 [Brassica oleracea] (48)
| | /-96-+
| | | | /----- GSBRNA2T00072357001 [Brassica napus] (75)
| | | \-93-+
/-100+ \--------------75--------------+ \----- XP_009114283.1 [Brassica rapa] (88)
| | |
| | | /----- RrC5809_p3 [Raphanus raphanistrum] (86)
| | \---100---+
/-100+ | \----- Rsa1.0_01376.1_g00001.1 [Raphanus sativus] (90)
| | |
| | \---------------------------------------------------- Tp2g12090 [Thellungiella parvula] (25)
| |
--99-+ \--------------------------------------------------------- 676729358 [Sisymbrium irio] (59)
|
| /---------- Rsa1.0_41043.1_g00001.1 [Raphanus sativus] (21)
| |
\------------------------100------------------------+ /----- RrC305_p3 [Raphanus raphanistrum] (52)
\-51-+
\----- Rsa1.0_09218.1_g00001.1 [Raphanus sativus] (60)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00042542001 [Brassica napus] (1)
|
| /--------------------------------- (169)
|----------------99---------------+
+ \--------------------------------- XP_009101427.1 [Brassica rapa] (40)
|
| /--------------------------------- GSBRNA2T00128798001 [Brassica napus] (11)
\----------------96---------------+
\--------------------------------- XP_013593815.1 [Brassica oleracea] (22)
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