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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1602
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 159:
/----- XP_009134239.1 [Brassica rapa] (2)
/-100+
| \----- GSBRNA2T00131556001 [Brassica napus] (4)
/-100+
| | /----- XP_013594517.1 [Brassica oleracea] (3)
| \-100+
/--74-+ \----- GSBRNA2T00093635001 [Brassica napus] (49)
| |
| | /----- Rsa1.0_00108.1_g00047.1 [Raphanus sativus] (65)
| \---100---+
| \----- RrC10260_p2 [Raphanus raphanistrum] (88)
|
/-95-+ /----- GSBRNA2T00131553001 [Brassica napus] (8)
| | /-100+
| | | \----- XP_009134198.1 [Brassica rapa] (71)
| | /-100+
| | | \---------- XP_013614741.1 [Brassica oleracea] (85)
| \-100-+
| \--------------- Rsa1.0_00108.1_g00044.1 [Raphanus sativus] (18)
/-100+
| | /----- XP_013614968.1 [Brassica oleracea] (31)
| | /-100+
| | | \----- GSBRNA2T00067621001 [Brassica napus] (72)
| | /-100+
| | | | /----- GSBRNA2T00131555001 [Brassica napus] (43)
/-53-+ | | \-100+
| | \----100---+ \----- XP_009134220.1 [Brassica rapa] (86)
| | |
| | \--------------- Rsa1.0_00108.1_g00045.1 [Raphanus sativus] (34)
/-94-+ |
| | \------------------------------- 676713258 [Sisymbrium irio] (82)
| |
| | /----- GSBRNA2T00128614001 [Brassica napus] (12)
/-97-+ \--------------98--------------+
| | \----- GSBRNA2T00047654001 [Brassica napus] (19)
| |
| \----------------------------------------- Tp7g19080 [Thellungiella parvula] (62)
|
| /----- Thhalv10000542m [Eutrema salsugineum] (15)
| /-100+
| | \----- Thhalv10000527m [Eutrema salsugineum] (45)
| /-74-+
| | | /----- Thhalv10000425m [Eutrema salsugineum] (20)
| | \-98-+
| /--65-+ \----- Thhalv10000492m [Eutrema salsugineum] (38)
| | |
/--98-+ | | /----- Thhalv10000621m [Eutrema salsugineum] (30)
| | | \----89---+
| | /-100+ \----- Thhalv10000420m [Eutrema salsugineum] (78)
| | | |
| | | |--------------------- Thhalv10000493m [Eutrema salsugineum] (64)
| | | |
| | | \--------------------- Thhalv10000624m [Eutrema salsugineum] (66)
| | /-100+
| | | | /--------------- Thhalv10027456m [Eutrema salsugineum] (33)
| | | | |
| | | | | /----- Thhalv10002284m [Eutrema salsugineum] (35)
| | | \----100---+ /-63-+
| \------100-----+ | | \----- Thhalv10027321m [Eutrema salsugineum] (36)
| | \-100+
| | \---------- Thhalv10027190m [Eutrema salsugineum] (63)
| |
| \------------------------------- Thhalv10026815m [Eutrema salsugineum] (46)
|
/-97-+ /---------- XP_009123829.1 [Brassica rapa] (6)
| | |
| | /-100+ /----- GSBRNA2T00126816001 [Brassica napus] (22)
| | | \-99-+
| | | \----- XP_009108661.1 [Brassica rapa] (24)
| | /--53-+
| | | |--------------- GSBRNA2T00020468001 [Brassica napus] (23)
| | | |
| | /-100+ \--------------- XP_013627684.1 [Brassica oleracea] (73)
| | | |
| | | \--------------------- GSBRNA2T00126809001 [Brassica napus] (26)
| | /-100+
| | | | /----- Rsa1.0_01263.1_g00005.1 [Raphanus sativus] (17)
| | | \---------100--------+
| | | \----- RrC3937_p1 [Raphanus raphanistrum] (68)
| | |
| | | /----- GSBRNA2T00138127001 [Brassica napus] (28)
| \---------100--------+ /-100+
| | | \----- GSBRNA2T00131559001 [Brassica napus] (51)
| | /-99-+
| | | \---------- 676713264 [Sisymbrium irio] (60)
| | |
| \-------98------+ /---------- Tp7g19130 [Thellungiella parvula] (40)
| | |
| \-100+ /----- Tp7g19120 [Thellungiella parvula] (76)
| \-100+
| \----- Tp7g19110 [Thellungiella parvula] (81)
|
| /---------- Csa12g037480.1 [Camelina sativa] (5)
| |
| | /----- Csa11g025430.1 [Camelina sativa] (29)
| /-100+-58-+
| | | \----- Csa12g037460.1 [Camelina sativa] (37)
| | |
| /--53-+ \---------- Csa12g037400.1 [Camelina sativa] (67)
| | |
/-97-+ /-59-+ \--------------- Csa11g025410.1 [Camelina sativa] (79)
| | | |
| | /-100+ \--------------------- Csa10g022390.1 [Camelina sativa] (21)
| | | |
| | | \-------------------------- Csa12g042020.1 [Camelina sativa] (27)
| | |
| | | /----- Carubv10019341m [Capsella rubella] (42)
| | /-100+ /-100+
| | | | | \----- Cagra.5134s0001.1.p [Capsella grandiflora] (54)
| | | | /-100+
| | | | | \---------- Carubv10007153m [Capsella rubella] (61)
| | | \------100------+
| | | \--------------- Cagra.1062s0030.1.p [Capsella grandiflora] (44)
| | /-100+
| | | |------------------------------------ Bostr.10689s0057.1.p [Boechera stricta] (50)
| | | |
| | | | /----- 492780 [Arabidopsis lyrata] (59)
| | | | /-100+
| | | | | \----- Araha.7999s0005.1.p [Arabidopsis halleri] (87)
| | | \-----------100-----------+
| | | | /----- AT4G21040.1 [Arabidopsis thaliana] (83)
| | | \-100+
| | | \----- AT4G21080.1 [Arabidopsis thaliana] (89)
| | /-99-+
| | | | /----- 914578 [Arabidopsis lyrata] (11)
--73-+ | | | /---100---+
| | | | | \----- AT4G21050.1 [Arabidopsis thaliana] (13)
| | | | |
| | | | /----98----+ /----- 914579 [Arabidopsis lyrata] (32)
| | | | | | /-100+
| | | | | | | \----- Araha.12732s0027.1.p [Arabidopsis halleri] (39)
| | | | | \-100+
| | | | | \---------- AT4G21030.1 [Arabidopsis thaliana] (70)
| | | \------100-----+
| | | | /--------------------- Bostr.10689s0053.1.p [Boechera stricta] (16)
| \----100---+ | |
| | | | /----- Cagra.1062s0034.1.p [Capsella grandiflora] (25)
| | \-99-+ /---100---+
| | | | \----- Carubv10006458m [Capsella rubella] (84)
| | | |
| | \--93-+ /---------- Csa10g022470.1 [Camelina sativa] (48)
| | | |
| | \-100+ /----- Csa12g037530.1 [Camelina sativa] (58)
| | \-84-+
| | \----- Csa11g025480.1 [Camelina sativa] (80)
| |
| | /----- KFK30156.1 [Arabis alpina] (53)
| \-------------------95-------------------+
| \----- AA57G00307 [Aethionema arabicum] (69)
|
\-------------------------------------------------------------- Thhalv10027080m [Eutrema salsugineum] (52)
Root part of tree:
/------------------------------------------------------------------- XP_013597335.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------- GSBRNA2T00156903001 [Brassica napus] (7)
|
| /---------- (159)
| /-------------54------------+
| | \---------- Tp7g19090 [Thellungiella parvula] (9)
| |
| | /---------- GSBRNA2T00098203001 [Brassica napus] (10)
| | /---100--+
| | | \---------- XP_013594711.1 [Brassica oleracea] (57)
+ | /---100---+
| | | | /---------- XP_009134257.1 [Brassica rapa] (75)
| /---100---+ | \---100--+
| | |---100--+ \---------- GSBRNA2T00131557001 [Brassica napus] (77)
| | | |
| | | | /---------- Rsa1.0_00108.1_g00048.1 [Raphanus sativus] (41)
| | | \--------100-------+
| /---100--+ | \---------- RrC10260_p1 [Raphanus raphanistrum] (47)
| | | |
| | | \-------------------------------------- 676713260 [Sisymbrium irio] (55)
| | |
\----97---+ \------------------------------------------------ RrC139_p2 [Raphanus raphanistrum] (56)
|
| /---------- XP_009137161.1 [Brassica rapa] (14)
\----------------------70----------------------+
\---------- GSBRNA2T00023653001 [Brassica napus] (74)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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