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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1606
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 153:
/----- Rsa1.0_01376.1_g00010.1 [Raphanus sativus] (4)
/------100------+
| \----- RrC4620_p2 [Raphanus raphanistrum] (24)
|
| /----- XP_013610850.1 [Brassica oleracea] (7)
| /-100+
/--------100--------+ | \----- GSBRNA2T00033513001 [Brassica napus] (51)
| | /-100+
| | | | /----- XP_009114291.1 [Brassica rapa] (15)
| | | \-100+
| \-100-+ \----- XP_009114293.1 [Brassica rapa] (38)
| |
| \--------------- GSBRNA2T00076663001 [Brassica napus] (37)
|
| /----- XP_009101446.1 [Brassica rapa] (6)
| /-100+
| | \----- GSBRNA2T00054768001 [Brassica napus] (16)
| /-100+
/-100+ | | /----- XP_013593756.1 [Brassica oleracea] (70)
| | | \-100+
| | /---------100--------+ \----- GSBRNA2T00128764001 [Brassica napus] (81)
| | | |
| | | | /----- Rsa1.0_00382.1_g00027.1 [Raphanus sativus] (10)
| | | \---100---+
| | | \----- RrC12599_p1 [Raphanus raphanistrum] (54)
| | |
| | | /---------- GSBRNA2T00069896001 [Brassica napus] (26)
| | | |
| | | /-80-+ /----- XP_013612520.1 [Brassica oleracea] (44)
| \-95-+ | \-100+
/-100-+ | /--80-+ \----- GSBRNA2T00097923001 [Brassica napus] (76)
| | | | |
| | | /-100+ \--------------- GSBRNA2T00041687001 [Brassica napus] (33)
| | | | |
| | | | \--------------------- XP_009128943.1 [Brassica rapa] (66)
| | | /-100+
| | | | | /----- Rsa1.0_02041.1_g00003.1 [Raphanus sativus] (53)
/-100+ | | | \---------100--------+
| | | \-99-+ \----- RrC9887_p2 [Raphanus raphanistrum] (55)
| | | |
| | | \------------------------------- 676774550 [Sisymbrium irio] (78)
| | |
| | \---------------------------------------------- Tp2g11950 [Thellungiella parvula] (27)
| |
| \---------------------------------------------------- Thhalv10000871m [Eutrema salsugineum] (25)
|
| /----- Cagra.3675s0017.1.p [Capsella grandiflora] (23)
/-100+ /---100---+
| | | \----- Carubv10026597m [Capsella rubella] (30)
| | |
| | /-100-+ /----- Csa11g064680.1 [Camelina sativa] (52)
| | | | /-100+
| | | | | \----- Csa18g002730.1 [Camelina sativa] (68)
| | /-85-+ \-100+
| | | | \---------- Csa20g081520.1 [Camelina sativa] (73)
| | | |
| | | \--------------------- Bostr.28243s0001.1.p [Boechera stricta] (67)
| \--------------100-------------+
| | /----- Araha.7205s0002.1.p [Arabidopsis halleri] (46)
| | /-100+
| | | \----- 356279 [Arabidopsis lyrata] (65)
| \------100------+
| \---------- AT5G47140.1 [Arabidopsis thaliana] (79)
|
| /----- Rsa1.0_00220.1_g00017.1 [Raphanus sativus] (5)
| /---100---+
| | \----- RrC18592_p1 [Raphanus raphanistrum] (40)
| |
| /----100---+ /---------- XP_009108336.1 [Brassica rapa] (20)
| | | |
| | \-100+ /----- XP_013605663.1 [Brassica oleracea] (34)
| | \-99-+
| | \----- GSBRNA2T00010972001 [Brassica napus] (36)
| /-93-+
| | | /--------------------- 676728394 [Sisymbrium irio] (28)
--100+ | | |
| | | | /----- XP_013615880.1 [Brassica oleracea] (31)
| | | | /-100+
| | \-99-+ | \----- GSBRNA2T00067662001 [Brassica napus] (59)
| | | /-100+
| | | | | /----- GSBRNA2T00131243001 [Brassica napus] (47)
| /-100+ | | \-99-+
| | | \-100-+ \----- XP_009130771.1 [Brassica rapa] (48)
| | | |
| | | | /----- RrC1846_p1 [Raphanus raphanistrum] (41)
| | | \---100---+
| /-100+ | \----- Rsa1.0_00326.1_g00012.1 [Raphanus sativus] (43)
| | | |
| | | \------------------------------- Tp7g16590 [Thellungiella parvula] (21)
| | |
| | \------------------------------------ Thhalv10024940m [Eutrema salsugineum] (75)
| |
| | /---------- AT4G17570.2 [Arabidopsis thaliana] (12)
| /-100+ |
| | | /------100------+ /----- 493120 [Arabidopsis lyrata] (56)
| | | | \-100+
| | | | \----- Araha.4507s0007.1.p [Arabidopsis halleri] (71)
| | | |
| | | | /----- Carubv10007115m [Capsella rubella] (17)
| | | | /---100---+
| | \------100-----+ | \----- Cagra.3356s0048.1.p [Capsella grandiflora] (63)
| | | |
\------100------+ | /--59-+ /---------- Csa11g031090.1 [Camelina sativa] (19)
| | | | |
| | | \-100+ /----- Csa12g047050.1 [Camelina sativa] (62)
| \-100+ \-99-+
| | \----- Csa10g027810.1 [Camelina sativa] (77)
| |
| \--------------------- Bostr.30275s0218.1.p [Boechera stricta] (60)
|
\---------------------------------------------- AA57G00030 [Aethionema arabicum] (45)
Root part of tree:
/------------------------------------------------------------------- Gh_D09G1872 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.006G214400.1 [Gossypium raimondii] (29)
|
| /------- Gh_A12G1945 [Gossypium hirsutum] (2)
| /--100--+
| | \------- Cotton_A_07168_BGI-A2_v1.0 [Gossypium arboreum] (64)
| /------100-----+
| | | /------- Gh_D12G2125 [Gossypium hirsutum] (11)
| | \---94--+
| | \------- Gorai.008G231500.1 [Gossypium raimondii] (32)
| |
| | /------- Gorai.004G193200.1 [Gossypium raimondii] (9)
| | /--100--+
| | | \------- Gh_D08G1783 [Gossypium hirsutum] (61)
| | /--100-+
| | | | /------- Cotton_A_36873_BGI-A2_v1.0 [Gossypium arboreum] (22)
| | | \--100--+
| /----------63---------+ | \------- Gh_A08G1484 [Gossypium hirsutum] (35)
| | |---58--+
| | | | /------- Gh_A03G0054 [Gossypium hirsutum] (49)
| | | | /--100--+
+ | | | | \------- Cotton_A_16049_BGI-A2_v1.0 [Gossypium arboreum] (50)
| | | \--100-+
| | | | /------- Gh_D03G1602 [Gossypium hirsutum] (58)
| | | \--100--+
| | | \------- Gorai.003G177500.1 [Gossypium raimondii] (72)
| | |
| | \------------------------------ Thecc1EG015870t1 [Theobroma cacao] (42)
| |
| /--100--+ /------- Ciclev10019607m [Citrus clementina] (3)
| | | /--100--+
| | | | \------- orange1.1g009151m [Citrus sinensis] (82)
| | | /-------------100-------------+
| | | | | /------- Neem_7758_f_10 [Azadirachta indica] (8)
| | | | \---94--+
| | | | \------- Neem_29926_f_1 [Azadirachta indica] (74)
| | | |
| | | | /---------------------- (153)
| | | | |
| | | | | /------- XP_010518703.1 [Tarenaya hassleriana] (18)
| | \--100-+ /--100--+ /--100--+
| | | | | | \------- XP_010538480.1 [Tarenaya hassleriana] (84)
| | | | \--100-+
\--100-+ | /--100-+ \--------------- XP_010529984.1 [Tarenaya hassleriana] (39)
| | | |
| | | \------------------------------ evm.model.supercontig_74.95 [Carica papaya] (13)
| | |
| \---98--+ /------- Eucgr.E00364.1.p [Eucalyptus grandis] (14)
| | /--100--+
| | | \------- EcC023187.10 [Eucalyptus camaldulensis] (57)
| \---------100---------+
| | /------- Eucgr.D02129.1.p [Eucalyptus grandis] (69)
| \--100--+
| \------- EcC040945.10 [Eucalyptus camaldulensis] (80)
|
| /------- Cotton_A_16593_BGI-A2_v1.0 [Gossypium arboreum] (83)
\-------------------------100------------------------+
\------- Gh_A09G1763 [Gossypium hirsutum] (85)
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