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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1611
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131:
/----- Tp6g02500 [Thellungiella parvula] (2)
/-----------------98----------------+
| \----- Thhalv10028821m [Eutrema salsugineum] (79)
|
| /------------------------------------ 676732794 [Sisymbrium irio] (4)
| |
| | /---------- GSBRNA2T00018443001 [Brassica napus] (6)
| | |
/-69-+ | | /----- GSBRNA2T00018220001 [Brassica napus] (47)
| | | /-99-+-100+
| | | | | \----- XP_013612197.1 [Brassica oleracea] (86)
| | | | |
| | | /----98----+ \---------- XP_009111272.1 [Brassica rapa] (76)
| | | | |
| | | | | /----- Rsa1.0_00132.1_g00023.1 [Raphanus sativus] (40)
| \-93-+ | \---100---+
| | | \----- RrC16674_p2 [Raphanus raphanistrum] (55)
| | |
| | /-95-+ /--------------- XP_009134422.1 [Brassica rapa] (20)
| | | | |
| | | | | /----- XP_013614535.1 [Brassica oleracea] (65)
| | | | /-100-+ /-100+
| | | | | | | \----- GSBRNA2T00002398001 [Brassica napus] (71)
| | | | | \-92-+
| | | \-100+ \---------- GSBRNA2T00151670001 [Brassica napus] (77)
| | | |
| \-56-+ | /----- RrC1223_p2 [Raphanus raphanistrum] (43)
| | \------100------+
/--93-+ | \----- Rsa1.0_02362.1_g00004.1 [Raphanus sativus] (72)
| | |
| | | /----- XP_009144630.1 [Brassica rapa] (28)
| | | /-100+
| | | | \----- GSBRNA2T00104317001 [Brassica napus] (42)
| | \---------100--------+
| | | /----- GSBRNA2T00152541001 [Brassica napus] (53)
| | \-100+
| | \----- XP_013615939.1 [Brassica oleracea] (82)
| |
| | /--------------- Bostr.2983s0202.1.p [Boechera stricta] (5)
| | |
| | | /----- Csa08g051850.1 [Camelina sativa] (11)
| | | /-100+
/-93-+ | /--70-+ | \----- Csa02g005850.1 [Camelina sativa] (75)
| | | | | |
| | | | | | /----- Carubv10001523m [Capsella rubella] (31)
| | | | \-100+-97-+
| | | | | \----- Cagra.0635s0023.1.p [Capsella grandiflora] (70)
| | | | |
| | \-----------100----------+ \---------- Csa13g054580.1 [Camelina sativa] (45)
| | |
| | |--------------------- Araha.9182s0005.1.p [Arabidopsis halleri] (18)
| | |
| | | /----- 490301 [Arabidopsis lyrata] (56)
| | \-------76------+
| | \----- AT4G02590.1 [Arabidopsis thaliana] (73)
| |
/-96-+ \---------------------------------------------------- AA32G00287 [Aethionema arabicum] (17)
| |
| | /------------------------------------ AA7G00048 [Aethionema arabicum] (8)
| | |
| | | /----- RrC37_p11 [Raphanus raphanistrum] (12)
| | | /----87---+
| | | | \----- Rsa1.0_00336.1_g00035.1 [Raphanus sativus] (49)
| | | |
| | | /-100-+ /----- XP_009119583.1 [Brassica rapa] (36)
| | | | | /-95-+
| | | | | | \----- GSBRNA2T00150402001 [Brassica napus] (39)
| | | | \-59-+
| | | /----56---+ | /----- GSBRNA2T00002665001 [Brassica napus] (58)
| | | | | \-88-+
| \---------100--------+ | | \----- XP_013587292.1 [Brassica oleracea] (64)
| | | |
| | | \--------------------- KFK42664.1 [Arabis alpina] (32)
| | |
| | | /----- Csa14g003150.1 [Camelina sativa] (14)
| | | /-68-+
| | | | \----- Csa03g003100.1 [Camelina sativa] (78)
--96-+ | | /-100+
| | | | \---------- Csa17g004030.1 [Camelina sativa] (16)
| | | /-100-+
| | | | | /----- Carubv10009831m [Capsella rubella] (21)
| \-95-+ | \---100---+
| | | \----- Cagra.0897s0074.1.p [Capsella grandiflora] (22)
| | /-100+
| | | | /----- 470281 [Arabidopsis lyrata] (23)
| | | | /-70-+
| | | | | \----- Araha.39200s0006.1.p [Arabidopsis halleri] (88)
| |-50-+ \----100---+
| | | \---------- AT1G03040.1 [Arabidopsis thaliana] (63)
| | |
| | \-------------------------- Thhalv10008279m [Eutrema salsugineum] (59)
| |
| |------------------------------- Tp1g02030 [Thellungiella parvula] (67)
| |
| \------------------------------- 676750598 [Sisymbrium irio] (81)
|
| /----- XP_010522761.1 [Tarenaya hassleriana] (44)
\---------------------------100--------------------------+
\----- XP_010556765.1 [Tarenaya hassleriana] (68)
Root part of tree:
/------------------------------------------------------------------- Cotton_A_09305_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
|------------------------------------------------------------------- Gh_D11G2556 [Gossypium hirsutum] (7)
|
|------------------------------------------------------------------- Gorai.007G277200.1 [Gossypium raimondii] (85)
|
| /--------------------------------- (131)
| |
| | /------ Ciclev10021443m [Citrus clementina] (3)
| | /-100+
| | | \------ orange1.1g022649m [Citrus sinensis] (13)
| | /-100-+
| | | \----------- Neem_2420_f_2 [Azadirachta indica] (10)
| | /----66----+
| | | \----------------- Eucgr.B01487.1.p [Eucalyptus grandis] (35)
| | |
| | | /------ Gh_A08G1678 [Gossypium hirsutum] (9)
| | | /-100+
| | | | \------ Cotton_A_20686_BGI-A2_v1.0 [Gossypium arboreum] (51)
| /-100-+ | /-100-+
| | | | | | /------ Gh_D08G2028 [Gossypium hirsutum] (26)
| | | | | \-99-+
| | | | | \------ Gorai.004G218900.1 [Gossypium raimondii] (33)
| | | | /-91-+
| | | | | | /------ Gh_A08G2484 [Gossypium hirsutum] (24)
| | | | | | /-100+
| | | | | | | \------ Cotton_A_26005_BGI-A2_v1.0 [Gossypium arboreum] (83)
| | | | | \-100-+
| | | | | | /------ Gh_D08G0666 [Gossypium hirsutum] (27)
| | | | | \-95-+
| | | | | \------ Gorai.004G075200.1 [Gossypium raimondii] (61)
| | | | |
| | \-68-+ | /------ Gh_D11G1319 [Gossypium hirsutum] (29)
| | | | /-100+
| | | | | \------ Gorai.007G141800.1 [Gossypium raimondii] (38)
| | | |----100---+
+ | |-100-+ | /------ Cotton_A_26571_BGI-A2_v1.0 [Gossypium arboreum] (34)
| | | | \-85-+
| | | | \------ Gh_A11G1163 [Gossypium hirsutum] (46)
| /--56-+ | |
| | | | | /------ Cotton_A_05966_BGI-A2_v1.0 [Gossypium arboreum] (30)
| | | | | /-100+
| | | | | | \------ Gh_A07G2157 [Gossypium hirsutum] (41)
| | | | |----100---+
| | | | | | /------ Gorai.001G242500.1 [Gossypium raimondii] (57)
| | | | | \-100+
| | | | | \------ Gh_D07G2121 [Gossypium hirsutum] (60)
| | | | |
| | | | \---------------------- Thecc1EG004217t1 [Theobroma cacao] (74)
| | | |
| | | \---------------------------- evm.model.supercontig_52.97 [Carica papaya] (62)
| | |
| /-84-+ | /------ Ciclev10001768m [Citrus clementina] (25)
| | | | /-100+
| | | | | \------ orange1.1g040019m [Citrus sinensis] (69)
| | | |-------------78------------+
| | | | \----------- Neem_6855_f_10 [Azadirachta indica] (52)
| | | |
| | | | /------ Neem_29679_a_1 [Azadirachta indica] (50)
| | | \---------------64---------------+
| | | \------ Araha.5618s0017.1.p [Arabidopsis halleri] (66)
| | |
| /-100-+ | /----------- Eucgr.H04337.1.p [Eucalyptus grandis] (15)
| | | | |
| | | \---------------100---------------+ /------ EcC009296.10 [Eucalyptus camaldulensis] (54)
| | | \-96-+
| | | \------ EcC041921.20 [Eucalyptus camaldulensis] (80)
| | |
| /-100+ | /------ XP_010553329.1 [Tarenaya hassleriana] (37)
| | | | /-99-+
| | | | | \------ XP_010553759.1 [Tarenaya hassleriana] (84)
| | | \------------------89------------------+
\--93-+ | \----------- evm.model.supercontig_117.94 [Carica papaya] (48)
| |
| \-------------------------------------------------------- Thecc1EG026346t1 [Theobroma cacao] (87)
|
\------------------------------------------------------------- Gh_A11G2243 [Gossypium hirsutum] (19)
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