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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1660
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 119:
/----- Csa04g050130.1 [Camelina sativa] (4)
/-83-+
| \----- Csa05g017440.1 [Camelina sativa] (81)
/--------------------85-------------------+
| \---------- Csa06g039230.1 [Camelina sativa] (74)
|
| /------------------------------------ KFK36538.1 [Arabis alpina] (8)
| |
| | /------------------------------- Thhalv10017567m [Eutrema salsugineum] (16)
| | |
| | | /----- GSBRNA2T00053887001 [Brassica napus] (21)
| /-63-+ | /-100+
| | | | | \----- XP_013635691.1 [Brassica oleracea] (82)
| | | | /-100+
| | | | | | /----- XP_009143572.1 [Brassica rapa] (38)
| | \-100+ | \-100+
| | | /-100-+ \----- GSBRNA2T00117057001 [Brassica napus] (85)
| | | | |
| | | | | /----- Rsa1.0_02254.1_g00003.1 [Raphanus sativus] (83)
/-87-+ | | /-93-+ \---100---+
| | /-56-+ | | | \----- RrC1_p11 [Raphanus raphanistrum] (87)
| | | | | | |
| | | | \-61-+ \--------------------- 676788000 [Sisymbrium irio] (49)
| | | | |
| | | | \-------------------------- Tp4g18890 [Thellungiella parvula] (63)
| | | |
| |--56-+ | /---------- Araha.5004s0010.1.p [Arabidopsis halleri] (51)
| | | | |
| | | \--------------98--------------+ /----- AT2G36610.1 [Arabidopsis thaliana] (56)
/-100+ | | \-76-+
| | | | \----- 870000 [Arabidopsis lyrata] (77)
| | | |
| | | \---------------------------------------------- Bostr.23794s0432.1.p [Boechera stricta] (13)
| | |
| | | /----- Cagra.0228s0052.1.p [Capsella grandiflora] (20)
--100+ | \----------------------98----------------------+
| | \----- Carubv10024148m [Capsella rubella] (55)
| |
| \--------------------------------------------------------- AA60G00132 [Aethionema arabicum] (22)
|
\-------------------------------------------------------------- XP_010558970.1 [Tarenaya hassleriana] (29)
Root part of tree:
/------------------------------------------------------------------- RrC267_p3 [Raphanus raphanistrum] (1)
|
|------------------------------------------------------------------- Rsa1.0_01663.1_g00005.1 [Raphanus sativus] (18)
|
| /----- Gh_A01G1802 [Gossypium hirsutum] (2)
| /-100+
| | \----- Cotton_A_00505_BGI-A2_v1.0 [Gossypium arboreum] (88)
| /----100---+
| | \---------- Gorai.002G244200.1 [Gossypium raimondii] (41)
| |
| | /----- Cotton_A_00507_BGI-A2_v1.0 [Gossypium arboreum] (5)
| /-100+ /-100+
| | | | \----- Gh_A01G1801 [Gossypium hirsutum] (75)
| | | /-100+
| | | | \---------- Gorai.002G244000.1 [Gossypium raimondii] (46)
| /-99-+ \-100-+
| | | \--------------- Gh_D01G2042 [Gossypium hirsutum] (58)
| | |
| | \-------------------------- Thecc1EG022391t1 [Theobroma cacao] (50)
| |
| | /----- orange1.1g040769m [Citrus sinensis] (6)
| | /-100+
| /-55-+ | \----- Ciclev10012525m [Citrus clementina] (44)
| | |---------100--------+
| | | | /----- Neem_35923_f_1 [Azadirachta indica] (31)
| | | \-100+
| | | \----- Neem_13445_f_1 [Azadirachta indica] (35)
| /-100+ |
| | | | /----- Eucgr.A01575.1.p [Eucalyptus grandis] (25)
| | | \-----------100-----------+
| | | \----- EcC000178.10 [Eucalyptus camaldulensis] (61)
| /-100+ |
| | | \------------------------------------ evm.model.supercontig_5.106 [Carica papaya] (30)
| | |
| /--99-+ \----------------------------------------- (119)
| | |
| /-54-+ \---------------------------------------------- XP_010558215.1 [Tarenaya hassleriana] (68)
| | |
| | \---------------------------------------------------- AA19G00212 [Aethionema arabicum] (10)
| |
| | /----- Cagra.0154s0024.1.p [Capsella grandiflora] (3)
| | /-100+
| | | \----- Carubv10002831m [Capsella rubella] (76)
| | /-100+
| | | \---------- Bostr.2128s0069.1.p [Boechera stricta] (62)
| | /----100---+
| | | \--------------- 860781 [Arabidopsis lyrata] (47)
| | |
| | | /---------- Csa13g003870.1 [Camelina sativa] (11)
| | | |
| | /------100-----+ /-100+ /----- Csa08g060680.1 [Camelina sativa] (42)
| | | | | \-99-+
| | | | /--64-+ \----- Csa20g003950.1 [Camelina sativa] (66)
+ | | | | |
| | | \-100+ \--------------- Carubv10003464m [Capsella rubella] (86)
| | | |
| | | \--------------------- Cagra.0463s0004.1.p [Capsella grandiflora] (43)
| | |
| |------100------+ /------------------------------------ Thhalv10015784m [Eutrema salsugineum] (14)
| | | |
| | | | /----- GSBRNA2T00074017001 [Brassica napus] (17)
| | | | /-100+
| | | | | \----- XP_013608549.1 [Brassica oleracea] (24)
| | | | /-100+
| | | | | \---------- GSBRNA2T00136429001 [Brassica napus] (19)
| | | | /-100-+
| | \-100+ | | /----- RrC2237_p3 [Raphanus raphanistrum] (67)
| | | | \---100---+
| | | /-100+ \----- Rsa1.0_00335.1_g00021.1 [Raphanus sativus] (71)
| | | | |
| | | /-61-+ \--------------------- 676718002 [Sisymbrium irio] (84)
| | | | |
| | | | \-------------------------- Tp6g38930 [Thellungiella parvula] (65)
| | \-100+
| | | /----- Rsa1.0_05735.1_g00002.1 [Raphanus sativus] (26)
| | \-----------100-----------+
| | \----- RrC17403_p1 [Raphanus raphanistrum] (28)
| |
| | /--------------- GSBRNA2T00010767001 [Brassica napus] (7)
| | |
| | | /----- GSBRNA2T00136430001 [Brassica napus] (33)
| /-95-+ | /-99-+
| | | /-100-+ | \----- GSBRNA2T00032256001 [Brassica napus] (53)
| | | | |-100+
| | | | | \---------- XP_009122668.1 [Brassica rapa] (45)
| | | | |
| | | /-100+ \--------------- XP_013610664.1 [Brassica oleracea] (36)
| | | | |
| | | | | /----- RrC2237_p4 [Raphanus raphanistrum] (60)
| | |--------------99--------------+ \------100------+
| | | | \----- Rsa1.0_00335.1_g00022.1 [Raphanus sativus] (79)
| | | |
| | | \-------------------------- 676717998 [Sisymbrium irio] (48)
| | |
| | | /------------------------------- KFK24840.1 [Arabis alpina] (9)
| | | |
| | | | /--------------- Bostr.2128s0071.1.p [Boechera stricta] (34)
| | | | |
| | | | | /----- Csa13g003850.1 [Camelina sativa] (37)
| | | | /--89-+ /-100+
| | | | | | | \----- Csa20g003940.1 [Camelina sativa] (70)
| | |------------76-----------+ | \-100+
| | | | /-100+ \---------- Csa08g060700.1 [Camelina sativa] (54)
| | | | | |
| | | | | | /----- Carubv10002440m [Capsella rubella] (73)
| | | | | \------100------+
\-100+ | | | \----- Cagra.0154s0025.1.p [Capsella grandiflora] (78)
| | \-100+
| | | /----- Araha.52435s0002.1.p [Arabidopsis halleri] (39)
| | | /-99-+
| | | | \----- 325029 [Arabidopsis lyrata] (57)
| | \-------99------+
| | \---------- AT5G03790.1 [Arabidopsis thaliana] (80)
| |
| | /--------------------- Tp6g38940 [Thellungiella parvula] (12)
| | |
| | | /----- Rsa1.0_05557.1_g00003.1 [Raphanus sativus] (15)
| |-----------------67----------------+ /---100---+
| | | | \----- RrC8299_p1 [Raphanus raphanistrum] (32)
| | | |
| | \-100-+ /----- XP_009125517.1 [Brassica rapa] (59)
| | | /-97-+
| | | | \----- GSBRNA2T00119617001 [Brassica napus] (64)
| | \-100+
| | \---------- XP_013619786.1 [Brassica oleracea] (72)
| |
| \--------------------------------------------------------- Thhalv10014547m [Eutrema salsugineum] (27)
|
| /----- XP_013627901.1 [Brassica oleracea] (23)
| |
| |----- GSBRNA2T00049301001 [Brassica napus] (40)
\---------------------------97---------------------------+
|----- XP_009130780.1 [Brassica rapa] (52)
|
\----- GSBRNA2T00134287001 [Brassica napus] (69)
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