![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1667
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 137:
/---------- XP_013619277.1 [Brassica oleracea] (2)
|
/-100+ /----- XP_009123357.1 [Brassica rapa] (5)
| \-100+
| \----- GSBRNA2T00013972001 [Brassica napus] (48)
/--79-+
| | /----- Rsa1.0_01097.1_g00008.1 [Raphanus sativus] (57)
| \---100---+
| \----- RrC641_p4 [Raphanus raphanistrum] (84)
|
/-67-+ /----- RrC14395_p2 [Raphanus raphanistrum] (22)
| | /---100---+
| | | \----- Rsa1.0_00923.1_g00018.1 [Raphanus sativus] (67)
| | |
| \-100-+ /----- XP_013627192.1 [Brassica oleracea] (60)
| | /-100+
| | | \----- GSBRNA2T00125127001 [Brassica napus] (85)
| \-100+
| \---------- XP_009135055.1 [Brassica rapa] (79)
|
| /----- GSBRNA2T00073268001 [Brassica napus] (27)
/-67-+ /-100+
| | | \----- XP_013638377.1 [Brassica oleracea] (75)
| | /-100+
| | | | /----- GSBRNA2T00080677001 [Brassica napus] (43)
| | | \-100+
| |----100---+ \----- XP_009146933.1 [Brassica rapa] (49)
| | |
/-68-+ | | /----- Rsa1.0_00363.1_g00017.1 [Raphanus sativus] (35)
| | | \---100---+
| | | \----- RrC2737_p4 [Raphanus raphanistrum] (70)
| | |
/-68-+ | \-------------------------- 676765056 [Sisymbrium irio] (51)
| | |
| | \------------------------------- Tp3g07750 [Thellungiella parvula] (83)
| |
| \------------------------------------ Thhalv10020579m [Eutrema salsugineum] (77)
|
| /----- Araha.4860s0013.1.p [Arabidopsis halleri] (4)
/---------68---------+ /---------100--------+
| | | \----- AT3G09370.2 [Arabidopsis thaliana] (33)
| | |
| | | /----- Csa01g010090.1 [Camelina sativa] (18)
| | | /-99-+
| | | | \----- Csa15g010730.1 [Camelina sativa] (65)
| \------100-----+ /-100+
| | | \---------- Csa19g012840.1 [Camelina sativa] (38)
| | /-100-+
| | | | /----- Cagra.2515s0028.1.p [Capsella grandiflora] (52)
| | | \---100---+
| \-100+ \----- Carubv10013377m [Capsella rubella] (62)
| |
| \--------------------- Bostr.22252s0130.1.p [Boechera stricta] (42)
|
| /----- Gh_Sca004939G02 [Gossypium hirsutum] (3)
| /-66-+
| | \----- Cotton_A_03397_BGI-A2_v1.0 [Gossypium arboreum] (56)
| /-100+
| | | /----- Gh_D12G1052 [Gossypium hirsutum] (25)
| | \-99-+
| /-100-+ \----- Gorai.008G117400.1 [Gossypium raimondii] (36)
| | |
| | \--------------- Thecc1EG005402t1 [Theobroma cacao] (13)
| |
| /----------------100----------------+ /--------------- evm.model.supercontig_18.208 [Carica papaya] (14)
| | | |
| | | | /----- Neem_27542_f_3 [Azadirachta indica] (45)
| | \--90-+ /-100+
| | | | \----- Neem_9891_f_9 [Azadirachta indica] (69)
| | \-84-+
| | \---------- EcC054026.10 [Eucalyptus camaldulensis] (63)
| |
| | /--------------------- Carubv10002477m [Capsella rubella] (6)
--75-+ | |
| | | /---------- Csa13g056870.1 [Camelina sativa] (8)
| | /-100+ |
| | | | /-97-+ /----- Csa16g023230.1 [Camelina sativa] (24)
| | | | | \-70-+
| | | \-100-+ \----- Csa02g001590.1 [Camelina sativa] (78)
| | /-94-+ |
| | | | \--------------- Csa08g001640.1 [Camelina sativa] (73)
| | | |
| | | \-------------------------- Bostr.10064s0051.1.p [Boechera stricta] (20)
|-100+ /-100+
| | | | /----- 490512 [Arabidopsis lyrata] (16)
| | | | /-100+
| | | | | \----- Araha.7109s0021.1.p [Arabidopsis halleri] (80)
| | /-100+ \---------100--------+
| | | | \---------- AT4G00540.1 [Arabidopsis thaliana] (59)
| | | |
| | | \------------------------------------ KFK30632.1 [Arabis alpina] (10)
| | |
| | /-100+ /----- GSBRNA2T00012052001 [Brassica napus] (21)
| | | | /-100+
| | | | | \----- XP_009128489.1 [Brassica rapa] (31)
| | | | /-86-+
| | | | | \---------- GSBRNA2T00113286001 [Brassica napus] (28)
| | /--99-+ \-----------100-----------+
| | | | | /----- GSBRNA2T00012053001 [Brassica napus] (30)
| | | | \---100---+
| | | | \----- XP_009128621.1 [Brassica rapa] (74)
| \-100+ |
| | \---------------------------------------------- 676743408 [Sisymbrium irio] (26)
| |
| \---------------------------------------------------- Thhalv10029464m [Eutrema salsugineum] (82)
|
\-------------------------------------------------------------- AA93G00103 [Aethionema arabicum] (72)
Root part of tree:
/------------------------------------------------------------------- Gh_A09G1458 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Cotton_A_12042_BGI-A2_v1.0 [Gossypium arboreum] (7)
|
| /------------------------------------ (137)
| |
| | /----- 324904 [Arabidopsis lyrata] (11)
| | /-100+
| | | \----- Araha.21080s0002.1.p [Arabidopsis halleri] (86)
| | /-------98------+
| | | \---------- AT5G02320.1 [Arabidopsis thaliana] (17)
| | |
| | | /----- Csa13g002170.1 [Camelina sativa] (44)
| | | /-100+
| /-75-+ | | \----- Csa08g062350.1 [Camelina sativa] (76)
| | | /-100+ /-100+
| | | | | | \---------- Csa20g002380.1 [Camelina sativa] (66)
| | | | | /-100-+
| | | | | | | /----- Carubv10000643m [Capsella rubella] (46)
| | | | | | \---100---+
| | | | \-100+ \----- Cagra.0487s0012.1.p [Capsella grandiflora] (50)
| | | | |
| | | | \--------------------- Bostr.6251s0040.1.p [Boechera stricta] (47)
| | | |
| | \-100+ /----- XP_009122788.1 [Brassica rapa] (12)
| | | /-100+
| /-100+ | | \----- GSBRNA2T00069535001 [Brassica napus] (32)
| | | | /-100+
| | | | | | /----- GSBRNA2T00032377001 [Brassica napus] (15)
+ | | | | \-100+
| | | | /-100-+ \----- XP_013607324.1 [Brassica oleracea] (58)
| | | | | |
| | | \----95---+ \--------------- 676717716 [Sisymbrium irio] (34)
| | | |
| | | \--------------------- Thhalv10013211m [Eutrema salsugineum] (64)
| /--74-+ |
| | | | /---------- XP_010558324.1 [Tarenaya hassleriana] (19)
| | | | |
| | | \--------------100-------------+ /----- XP_010553045.1 [Tarenaya hassleriana] (23)
| | | \-51-+
| | | \----- XP_010543303.1 [Tarenaya hassleriana] (40)
| | |
| /-100+ | /----- evm.model.supercontig_228.17 [Carica papaya] (37)
| | | \-------------------100------------------+
| | | \----- Eucgr.K03133.1.p [Eucalyptus grandis] (55)
| | |
| | | /----- Neem_30914_f_1 [Azadirachta indica] (9)
| | | /-100+
| | | | \----- Neem_11095_f_2 [Azadirachta indica] (81)
| | \-------------------100-------------------+
| | | /----- orange1.1g009391m [Citrus sinensis] (41)
| /-100+ \-100+
| | | \----- Ciclev10011446m [Citrus clementina] (61)
| | |
| | | /----- Gh_D13G1009 [Gossypium hirsutum] (29)
| | | /-100+
| | | | \----- Gorai.001G249400.1 [Gossypium raimondii] (87)
| | | /-100+
\-100+ | | | /----- Cotton_A_41147_BGI-A2_v1.0 [Gossypium arboreum] (53)
| | | \-100+
| \--------------------96-------------------+ \----- Gh_A13G0754 [Gossypium hirsutum] (54)
| |
| \--------------- Thecc1EG021936t1 [Theobroma cacao] (71)
|
| /----- Gorai.006G172800.1 [Gossypium raimondii] (39)
\---------------------------100--------------------------+
\----- Gh_D09G1467 [Gossypium hirsutum] (68)
|




