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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1681
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 152:
/----- GSBRNA2T00118738001 [Brassica napus] (2)
/-99-+
| \----- XP_009103676.1 [Brassica rapa] (73)
/-100+
| | /----- XP_013630850.1 [Brassica oleracea] (55)
| \-100+
/--99-+ \----- GSBRNA2T00148140001 [Brassica napus] (60)
| |
| | /----- Rsa1.0_17887.1_g00001.1 [Raphanus sativus] (38)
/-99-+ \---100---+
| | \----- RrC12882_p1 [Raphanus raphanistrum] (69)
| |
| \--------------------- 676763598 [Sisymbrium irio] (50)
|
| /----- GSBRNA2T00029649001 [Brassica napus] (13)
/-76-+ /-100+
| | | \----- XP_013636763.1 [Brassica oleracea] (42)
| | /-100+
| | | | /----- GSBRNA2T00045209001 [Brassica napus] (18)
| | | \-100+
| | | \----- XP_009140894.1 [Brassica rapa] (20)
| \----100---+
/-99-+ | /----- Rsa1.0_00076.1_g00007.1 [Raphanus sativus] (36)
| | | /-100+
| | | | \----- RrC9027_p1 [Raphanus raphanistrum] (81)
| | \-100+
/-99-+ | \---------- GSBRNA2T00127806001 [Brassica napus] (37)
| | |
| | \------------------------------- Tp4g11130 [Thellungiella parvula] (75)
| |
| \------------------------------------ Thhalv10017012m [Eutrema salsugineum] (70)
|
| /---------- Csa07g016250.1 [Camelina sativa] (4)
| |
| /----100---+ /----- Csa05g038350.1 [Camelina sativa] (33)
| | \-63-+
| | \----- Csa16g016840.1 [Camelina sativa] (76)
| |
| | /----- Csa16g016850.1 [Camelina sativa] (11)
| /-98-+ /-77-+
| | | | \----- Csa07g016260.1 [Camelina sativa] (78)
| | | /-100+
/-99-+ | | | \---------- Csa05g038360.1 [Camelina sativa] (17)
| | | | |
| | | \--99-+ /----- Csa16g016830.1 [Camelina sativa] (12)
| | | | /-91-+
| | /-100+ | | \----- Csa07g016240.1 [Camelina sativa] (79)
| | | | \-100+
| | | | \---------- Csa05g038340.1 [Camelina sativa] (65)
| | | |
| | | | /----- Carubv10023774m [Capsella rubella] (23)
| | | | /-100+
| | /-100+ | | \----- Cagra.1876s0008.1.p [Capsella grandiflora] (49)
| | | | \-------99------+
| | | | | /----- Cagra.1876s0009.1.p [Capsella grandiflora] (40)
| | | | \-100+
| | | | \----- Carubv10023820m [Capsella rubella] (56)
| \-100+ |
| | \------------------------------- Bostr.27991s0092.1.p [Boechera stricta] (86)
| |
| | /---------- AT2G28340.1 [Arabidopsis thaliana] (58)
| | |
| \-----------100-----------+ /----- 901675 [Arabidopsis lyrata] (62)
| \-100+
| \----- Araha.1246s0003.1.p [Arabidopsis halleri] (89)
|
| /---------- Gorai.003G142600.1 [Gossypium raimondii] (6)
| |
| |---------- Gh_D03G1294 [Gossypium hirsutum] (51)
| /------100------+
/--53-+ | | /----- Cotton_A_04262_BGI-A2_v1.0 [Gossypium arboreum] (82)
| | | \-100+
| | | \----- Gh_A03G0273 [Gossypium hirsutum] (85)
| | |
| | | /----- Gh_A08G1770 [Gossypium hirsutum] (15)
| | | /-100+
| | | | \----- Cotton_A_05137_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | /-97-+ /-100+
| | | | | | /----- Gh_D08G2116 [Gossypium hirsutum] (47)
| | | | | \-100+
| | | | /-100-+ \----- Gorai.004G230100.1 [Gossypium raimondii] (80)
| | | | | |
| | | | | | /----- Gorai.013G267200.1 [Gossypium raimondii] (26)
| | | | | \---100---+
| | | | | \----- Cotton_A_10517_BGI-A2_v1.0 [Gossypium arboreum] (32)
| | | \-100+
| | /-100+ | /----- Gh_A05G0897 [Gossypium hirsutum] (16)
| | | | | /-100+
/-53-+ | | | | | \----- Cotton_A_07065_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | | | | \----100---+
| | | | | | /----- Gh_D05G0979 [Gossypium hirsutum] (22)
| | | | | \-80-+
| | | | | \----- Gorai.009G107900.2 [Gossypium raimondii] (63)
| | | /-53-+ |
| | | | | \------------------------------- Thecc1EG042068t1 [Theobroma cacao] (46)
| | | | |
| | | | | /----- Ciclev10029015m [Citrus clementina] (31)
| | | | |--------------100-------------+
| | \-91-+ | \----- orange1.1g023588m [Citrus sinensis] (59)
/-53-+ | | |
| | | | \------------------------------------ evm.model.supercontig_65.5 [Carica papaya] (74)
| | | |
| | | \----------------------------------------- Eucgr.J00922.1.p [Eucalyptus grandis] (77)
| | |
| | | /---------- XP_010542590.1 [Tarenaya hassleriana] (34)
| | | |
| | \-------------------100-------------------+ /----- XP_010521758.1 [Tarenaya hassleriana] (35)
| | \-100+
| | \----- XP_010557328.1 [Tarenaya hassleriana] (84)
| |
| \--------------------------------------------------------- AA233G00002 [Aethionema arabicum] (5)
|
--53-+ /----- Cagra.1637s0009.1.p [Capsella grandiflora] (3)
| /---100---+
| | \----- Carubv10009871m [Capsella rubella] (71)
| |
| /-100-+ /----- Csa14g009450.1 [Camelina sativa] (27)
| | | /-61-+
| | | | \----- Csa17g011440.1 [Camelina sativa] (52)
| /-100+ \-100+
| | | \---------- Csa03g011450.1 [Camelina sativa] (48)
| | |
| | \--------------------- Bostr.25219s0146.1.p [Boechera stricta] (19)
| |
\----------------100----------------+ /----- Araha.23334s0008.1.p [Arabidopsis halleri] (8)
| /-100+
| | \----- 470852 [Arabidopsis lyrata] (67)
| /-86-+
| | \---------- AT1G08010.1 [Arabidopsis thaliana] (61)
\----100---+
| /----- Araha.23334s0009.1.p [Arabidopsis halleri] (10)
\---100---+
\----- AT1G08000.1 [Arabidopsis thaliana] (30)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00122216001 [Brassica napus] (1)
|
|------------------------------------------------------------------- XP_009118398.1 [Brassica rapa] (43)
|
| /------- (152)
| /---51--+
| | \------- Thhalv10008338m [Eutrema salsugineum] (83)
| /----------53---------+
| | \--------------- Tp1g06640 [Thellungiella parvula] (44)
| |
| | /------------------------------ 676738284 [Sisymbrium irio] (7)
| | |
| | | /------- XP_009148049.1 [Brassica rapa] (24)
| | | /---99--+
| |--50--+ | \------- GSBRNA2T00156280001 [Brassica napus] (87)
| | | /--100-+
| /---80--+ | | | /------- GSBRNA2T00100639001 [Brassica napus] (54)
| | | | | \--100--+
| | | \---79--+ \------- XP_013586198.1 [Brassica oleracea] (64)
+ | | |
| | | | /------- RrC4933_p3 [Raphanus raphanistrum] (29)
| | | \------100-----+
| | | \------- Rsa1.0_00832.1_g00004.1 [Raphanus sativus] (53)
| /--95--+ |
| | | \------------------------------------- XP_010520375.1 [Tarenaya hassleriana] (14)
| | |
| | | /------- Rsa1.0_00157.1_g00038.1 [Raphanus sativus] (9)
| | | /------100-----+
| | | | \------- RrC5018_p2 [Raphanus raphanistrum] (28)
| | | |
| | \----------100---------+ /------- XP_009110913.1 [Brassica rapa] (39)
| /--100--+ | /--100--+
| | | | | \------- GSBRNA2T00025173001 [Brassica napus] (41)
| | | \--68--+
| | | | /------- GSBRNA2T00052898001 [Brassica napus] (72)
| | | \--100--+
| | | \------- XP_013604892.1 [Brassica oleracea] (88)
\--100-+ |
| | /------- Rsa1.0_00404.1_g00018.1 [Raphanus sativus] (25)
| \---------------------100--------------------+
| \------- RrC518_p3 [Raphanus raphanistrum] (57)
|
| /------- GSBRNA2T00019379001 [Brassica napus] (45)
\-------------------------100------------------------+
\------- XP_013604894.1 [Brassica oleracea] (68)
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