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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1682
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 140:
/----- Gorai.001G190000.1 [Gossypium raimondii] (2)
/-100+
| \----- Gh_D07G1645 [Gossypium hirsutum] (9)
/-100+
| | /----- Cotton_A_36596_BGI-A2_v1.0 [Gossypium arboreum] (5)
| \-79-+
| \----- Gh_A07G1493 [Gossypium hirsutum] (13)
/--78-+
| | /----- Gh_A08G0451 [Gossypium hirsutum] (29)
| | /-99-+
| | | \----- Cotton_A_03265_BGI-A2_v1.0 [Gossypium arboreum] (48)
| \-100+
| \---------- Gorai.004G061000.1 [Gossypium raimondii] (38)
|
| /----- Gh_A07G1753 [Gossypium hirsutum] (8)
| /-100+
| | \----- Cotton_A_31698_BGI-A2_v1.0 [Gossypium arboreum] (62)
|----100---+
/-100+ | /----- Gorai.001G223800.1 [Gossypium raimondii] (53)
| | \-59-+
| | \----- Gh_D07G1957 [Gossypium hirsutum] (80)
| |
| | /----- Gorai.001G099700.1 [Gossypium raimondii] (14)
| | /-63-+
| | | \----- Gh_D07G0867 [Gossypium hirsutum] (73)
| | /-100+
| | | | /----- Gh_A07G0806 [Gossypium hirsutum] (32)
| | | \-80-+
/-100+ | | \----- Cotton_A_26963_BGI-A2_v1.0 [Gossypium arboreum] (52)
| | \--78-+
| | | /----- Cotton_A_03720_BGI-A2_v1.0 [Gossypium arboreum] (20)
| | | /-100+
| | | | \----- Gh_A11G1370 [Gossypium hirsutum] (21)
| | \-100+
| | | /----- Gorai.007G164600.1 [Gossypium raimondii] (41)
| | \-100+
/-100+ | \----- Gh_D11G1518 [Gossypium hirsutum] (44)
| | |
| | \-------------------------- Thecc1EG002458t1 [Theobroma cacao] (86)
| |
| | /--------------- evm.model.supercontig_136.56 [Carica papaya] (6)
| | |
| | | /----- orange1.1g014662m [Citrus sinensis] (22)
| \------100------+ /-100+
/-98-+ | | \----- Ciclev10015362m [Citrus clementina] (55)
| | \-100+
| | \---------- Neem_1178_f_2 [Azadirachta indica] (63)
| |
| | /----- EcC054606.10 [Eucalyptus camaldulensis] (43)
| | /-100+
/-100+ | | \----- EcC007140.10 [Eucalyptus camaldulensis] (71)
| | \-----------100-----------+
| | \---------- Eucgr.A01371.1.p [Eucalyptus grandis] (83)
| |
| | /----- Eucgr.K01387.1.p [Eucalyptus grandis] (28)
/-100-+ \----------------100----------------+
| | \----- EcC027602.10 [Eucalyptus camaldulensis] (56)
| |
| | /----- XP_010532949.1 [Tarenaya hassleriana] (15)
| \-------------------100------------------+
/-100+ \----- XP_010542039.1 [Tarenaya hassleriana] (46)
| |
| | /----- XP_010548797.1 [Tarenaya hassleriana] (24)
| | /-57-+
| | | \----- XP_010551970.1 [Tarenaya hassleriana] (27)
| \-------------------100-------------------+
| \---------- XP_010524630.1 [Tarenaya hassleriana] (77)
|
| /---------- AT5G48250.1 [Arabidopsis thaliana] (10)
| |
| /------100------+ /----- Araha.23705s0002.1.p [Arabidopsis halleri] (23)
| | \-100+
| | \----- 917718 [Arabidopsis lyrata] (57)
| |
| /---100---+ /--------------------- Bostr.13083s0065.1.p [Boechera stricta] (12)
| | | |
/-100+ | | | /----- Cagra.14026s0004.1.p [Capsella grandiflora] (33)
| | | \-100+ /---100---+
| | | | | \----- Carubv10028191m [Capsella rubella] (51)
| | | | |
| | | \-100-+ /----- Csa11g074380.1 [Camelina sativa] (36)
| | | | /-99-+
| | | | | \----- Csa18g014330.1 [Camelina sativa] (84)
| | | \-100+
| | | \---------- Csa20g041160.1 [Camelina sativa] (50)
| | |
| | | /----- Rsa1.0_00923.1_g00011.1 [Raphanus sativus] (17)
| | | /---100---+
| | | | \----- RrC586_p4 [Raphanus raphanistrum] (66)
| | | |
| | | /-100-+ /----- XP_009151626.1 [Brassica rapa] (25)
| | | | | /-100+
| \---------100--------+ | | | \----- GSBRNA2T00144438001 [Brassica napus] (49)
| | | \-100+
| | /-100+ | /----- XP_013598992.1 [Brassica oleracea] (35)
| | | | \-100+
--100+ | | | \----- GSBRNA2T00142985001 [Brassica napus] (76)
| | | |
| | | \--------------------- 676782242 [Sisymbrium irio] (47)
| | |
| | | /----- Rsa1.0_06258.1_g00004.1 [Raphanus sativus] (26)
| | | /-100+
| | | | \----- RrC15479_p1 [Raphanus raphanistrum] (64)
| | /-84-+ |
| | | | | /----- GSBRNA2T00091645001 [Brassica napus] (30)
| | | |------100------+-100+
| | | | | \----- XP_009129717.1 [Brassica rapa] (54)
| | | | |
| | | | | /----- GSBRNA2T00120696001 [Brassica napus] (61)
| \-100+ | \-100+
| | | \----- XP_013616451.1 [Brassica oleracea] (81)
| | |
| | \-------------------------- Tp2g18620 [Thellungiella parvula] (45)
| |
| \------------------------------- Thhalv10004422m [Eutrema salsugineum] (58)
|
\-------------------------------------------------------------- AA29G00151 [Aethionema arabicum] (34)
Root part of tree:
/------------------------------------------------------------------- XP_013622989.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------- GSBRNA2T00125199001 [Brassica napus] (68)
|
| /------------------------------- (140)
| |
| | /----- Cagra.0133s0112.1.p [Capsella grandiflora] (3)
| | /---100---+
| | | \----- Carubv10013971m [Capsella rubella] (59)
| | |
| | /--99-+ /----- Csa01g008710.1 [Camelina sativa] (19)
| /-100+ | | /-86-+
| | | | | | \----- Csa15g009400.1 [Camelina sativa] (74)
| | | /-91-+ \-100+
| | | | | \---------- Csa19g011430.1 [Camelina sativa] (85)
| | | | |
| | | | \--------------------- Bostr.22252s0262.1.p [Boechera stricta] (75)
| | \-100+
| /-97-+ | /----- 478095 [Arabidopsis lyrata] (4)
| | | | /-100+
| | | | | \----- Araha.4706s0012.1.p [Arabidopsis halleri] (40)
| | | \------100------+
| /-97-+ | \---------- AT3G07650.1 [Arabidopsis thaliana] (79)
| | | |
| | | \------------------------------------ Thhalv10020965m [Eutrema salsugineum] (60)
+ | |
| | \----------------------------------------- Tp3g06590 [Thellungiella parvula] (37)
| |
| | /----- Rsa1.0_00105.1_g00017.1 [Raphanus sativus] (16)
| /-100-+ /---100---+
| | | | \----- RrC508_p5 [Raphanus raphanistrum] (39)
| | | |
| | | /-100-+ /----- GSBRNA2T00038967001 [Brassica napus] (65)
| | | | | /-100+
| | | | | | \----- XP_013586533.1 [Brassica oleracea] (69)
| | | | \-86-+
| | \-----------100----------+ | /----- GSBRNA2T00059507001 [Brassica napus] (70)
| | | \-100+
| /-100+ | \----- XP_009147047.1 [Brassica rapa] (72)
| | | |
| | | \--------------------- 676728644 [Sisymbrium irio] (31)
| | |
| | | /---------- XP_013619988.1 [Brassica oleracea] (18)
| | | |
| /-100+ | /-100+ /----- XP_009124232.1 [Brassica rapa] (67)
| | | | | \-98-+
| | | \-----------------100----------------+ \----- GSBRNA2T00018514001 [Brassica napus] (78)
| | | |
| | | \--------------- Rsa1.0_00196.1_g00015.1 [Raphanus sativus] (82)
\-100+ |
| \--------------------------------------------------------- Rsa1.0_00394.1_g00021.1 [Raphanus sativus] (7)
|
| /----- XP_009134989.1 [Brassica rapa] (11)
\---------------------------100--------------------------+
\----- GSBRNA2T00111777001 [Brassica napus] (42)
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