![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1705
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 154:
/----- Gorai.013G249100.1 [Gossypium raimondii] (3)
/-99-+
| \----- Gh_D13G2241 [Gossypium hirsutum] (45)
/-100+
| | /----- Cotton_A_02549_BGI-A2_v1.0 [Gossypium arboreum] (46)
| \-100+
/-100-+ \----- Gh_A13G1853 [Gossypium hirsutum] (81)
| |
| \--------------- Thecc1EG040397t1 [Theobroma cacao] (11)
|
/-92-+ /----- Neem_1774_f_3 [Azadirachta indica] (15)
| | /-100+
| | | \----- Neem_39636_f_1 [Azadirachta indica] (38)
| \----100---+
| | /----- Ciclev10017535m [Citrus clementina] (57)
| \-100+
/-93-+ \----- orange1.1g046898m [Citrus sinensis] (60)
| |
| | /----- Neem_2732_f_5 [Azadirachta indica] (41)
| | /-100+
| | | \----- Neem_33443_f_2 [Azadirachta indica] (67)
/-100+ \------100------+
| | | /----- evm.model.supercontig_46.140 [Carica papaya] (74)
| | \-100+
| | \----- Eucgr.C00358.1.p [Eucalyptus grandis] (88)
/-84-+ |
| | \------------------------------- evm.TU.contig_32277.1 [Carica papaya] (22)
| |
/-83-+ \------------------------------------ AA2G00168 [Aethionema arabicum] (32)
| |
/----80----+ \----------------------------------------- XP_010544462.1 [Tarenaya hassleriana] (9)
| |
| \---------------------------------------------- AA2G00191 [Aethionema arabicum] (73)
|
| /----- Cagra.2093s0004.1.p [Capsella grandiflora] (4)
| /---100---+
| | \----- Carubv10011592m [Capsella rubella] (10)
| |
| /-100-+ /----- Csa14g059470.1 [Camelina sativa] (6)
| | | /-69-+
| | | | \----- Csa03g058030.1 [Camelina sativa] (54)
| /-100+ \-100+
| | | \---------- Csa17g089890.1 [Camelina sativa] (12)
| | |
| | \--------------------- Bostr.26675s0076.1.p [Boechera stricta] (65)
| /-----------100-----------+
| | | /---------- AT1G51120.1 [Arabidopsis thaliana] (19)
| | | |
| | \------100------+ /----- 474227 [Arabidopsis lyrata] (36)
| | \-100+
| | \----- Araha.7962s0007.1.p [Arabidopsis halleri] (78)
| |
| | /----- Rsa1.0_00731.1_g00002.1 [Raphanus sativus] (5)
| | /---100---+
| | | \----- RrC12211_p1 [Raphanus raphanistrum] (44)
| | |
| | /-100-+ /----- XP_013591041.1 [Brassica oleracea] (8)
| | | | /-100+
| | | | | \----- GSBRNA2T00063330001 [Brassica napus] (70)
| | /------100-----+ \-100+
| | | | \---------- XP_009147812.1 [Brassica rapa] (21)
| | | |
| | | \--------------------- 676748870 [Sisymbrium irio] (17)
| | |
| | | /----- XP_013591225.1 [Brassica oleracea] (14)
| | | /-100+
| | | | \----- GSBRNA2T00063364001 [Brassica napus] (35)
| | | /-100+
| | | | | /----- GSBRNA2T00021143001 [Brassica napus] (33)
| | | | \-100+
| | | | \----- XP_009147833.1 [Brassica rapa] (77)
| | /-91-+ /-100-+
| | | | | | /---------- Rsa1.0_12274.1_g00001.1 [Raphanus sativus] (16)
| | | | | | |
| | | | | \-100+ /----- RrC4678_p1 [Raphanus raphanistrum] (18)
| | | | | \-100+
|-62-+ | | /-93-+ \----- RrC12155_p2 [Raphanus raphanistrum] (40)
| | | | | |
| | | | | | /----- XP_013591163.1 [Brassica oleracea] (28)
| | | | | | /-100+
| | | | /-94-+ | | \----- GSBRNA2T00063329001 [Brassica napus] (49)
| | | | | | \----100---+
| | | | | | \---------- XP_009147811.1 [Brassica rapa] (75)
/-95-+ | | \-100+ |
| | | /-88-+ | \-------------------------- GSBRNA2T00021160001 [Brassica napus] (29)
| | | | | |
| | | | | \------------------------------- 676748872 [Sisymbrium irio] (63)
| | | | |
| | | | | /---------- GSBRNA2T00048280001 [Brassica napus] (42)
| | | | | |
| | | | | /-100+ /----- XP_009144942.1 [Brassica rapa] (48)
| | | | | | \-100+
| | | | | | \----- GSBRNA2T00043338001 [Brassica napus] (79)
| | | | | /-100-+
| | | | | | | /----- Rsa1.0_00856.1_g00011.1 [Raphanus sativus] (53)
| | | | | | \---100---+
| | | | \---------68--------+ \----- RrC21_p4 [Raphanus raphanistrum] (69)
| | | | |
| | | | \--------------------- Tp1g37530 [Thellungiella parvula] (84)
| | | |
| | | | /----- Thhalv10012161m [Eutrema salsugineum] (20)
| | | | /-100+
| | | | | \----- Thhalv10012152m [Eutrema salsugineum] (87)
| | | |-----------------95----------------+
| | | | \---------- Thhalv10012377m [Eutrema salsugineum] (47)
| | | |
| | \--62-+ /--------------- Csa03g056660.1 [Camelina sativa] (24)
| | | |
| | | /--97-+ /---------- Csa17g088420.1 [Camelina sativa] (25)
| | | | | |
| | | | \-100+ /----- Csa14g057590.1 [Camelina sativa] (55)
--100+ | | /-100+ \-100+
| | | | | \----- Csa14g059010.1 [Camelina sativa] (68)
| | | | |
| | | | \--------------------- Csa05g083210.1 [Camelina sativa] (26)
| | | /-51-+
| | | | | /----- Csa14g059030.1 [Camelina sativa] (66)
| | | | | /-100+
| | | | | | \----- Csa03g056670.1 [Camelina sativa] (72)
| | | | \------100------+
| | | /-55-+ | /----- Csa12g078120.1 [Camelina sativa] (83)
| | | | | \-100+
| | | | | \----- Csa17g088440.1 [Camelina sativa] (86)
| | | /-80-+ |
| | | | | \------------------------------- Carubv10011257m [Capsella rubella] (43)
| | | | |
| | | | \------------------------------------ Bostr.26675s0109.1.p [Boechera stricta] (30)
| | \-92-+
| | | /---------- AT1G50680.1 [Arabidopsis thaliana] (51)
| | | |
| | \--------------100-------------+ /----- 474200 [Arabidopsis lyrata] (52)
| | \-99-+
| | \----- Araha.32168s0001.1.p [Arabidopsis halleri] (59)
| |
| | /----- KFK35878.1 [Arabis alpina] (7)
| \-------------------------79------------------------+
| \----- KFK35915.1 [Arabis alpina] (50)
|
\-------------------------------------------------------------- Thhalv10012356m [Eutrema salsugineum] (76)
Root part of tree:
/------------------------------------------------------------------- XP_013624963.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------- GSBRNA2T00003011001 [Brassica napus] (27)
|
| /----------------------------------------------------------- XP_009107560.1 [Brassica rapa] (2)
| |
| | /-------- (154)
| | /----------------92---------------+
| | | \-------- Tp1g37850 [Thellungiella parvula] (37)
| | |
+ | | /-------- GSBRNA2T00058893001 [Brassica napus] (13)
| | | /---100--+
| | | | \-------- XP_013585333.1 [Brassica oleracea] (71)
| | | /--100--+
| | | | | /-------- GSBRNA2T00043362001 [Brassica napus] (31)
| | /--100--+ | \---100--+
| | | | /--100--+ \-------- XP_009144967.1 [Brassica rapa] (62)
| | | | | |
| | | | | | /-------- RrC770_p3 [Raphanus raphanistrum] (39)
| | | | | \-------100------+
\--100--+ | | | \-------- Rsa1.0_00149.1_g00014.1 [Raphanus sativus] (85)
| | | |
| | \---79---+ /-------- XP_009147781.1 [Brassica rapa] (56)
| | | /---100--+
| | | | \-------- GSBRNA2T00021173001 [Brassica napus] (80)
|---100--+ | /--100--+
| | | | | /-------- GSBRNA2T00029169001 [Brassica napus] (61)
| | | | \---99---+
| | \--100--+ \-------- XP_013592316.1 [Brassica oleracea] (64)
| | |
| | | /-------- RrC2535_p4 [Raphanus raphanistrum] (58)
| | \-------100------+
| | \-------- Rsa1.0_00769.1_g00006.1 [Raphanus sativus] (82)
| |
| \-------------------------------------------------- RrC11138_p1 [Raphanus raphanistrum] (34)
|
\----------------------------------------------------------- GSBRNA2T00085787001 [Brassica napus] (23)
|




