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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1753
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 127:
/----- Cotton_A_23165_BGI-A2_v1.0 [Gossypium arboreum] (4)
/-71-+
| \----- Gh_A13G1269 [Gossypium hirsutum] (14)
/-100+
| | /----- Gorai.013G172500.1 [Gossypium raimondii] (47)
| \-91-+
| \----- Gh_D13G1573 [Gossypium hirsutum] (48)
/--93-+
| | /----- Gh_D11G2955 [Gossypium hirsutum] (56)
| | /-99-+
| | | \----- Gorai.007G325700.1 [Gossypium raimondii] (72)
| \-100+
/-93-+ \---------- Gh_A11G2590 [Gossypium hirsutum] (69)
| |
| | /---------- Gorai.002G064900.1 [Gossypium raimondii] (43)
| | |
| | | /----- Gh_A01G0419 [Gossypium hirsutum] (49)
/-100+ \----100---+-75-+
| | | \----- Gh_D01G0423 [Gossypium hirsutum] (76)
| | |
| | \---------- Cotton_A_20105_BGI-A2_v1.0 [Gossypium arboreum] (71)
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/-65-+ \-------------------------- Thecc1EG031686t1 [Theobroma cacao] (22)
| |
| | /----- orange1.1g037696m [Citrus sinensis] (26)
| | /-100+
| | | \----- Ciclev10008720m [Citrus clementina] (42)
/-62-+ \---------100--------+
| | | /----- Neem_31072_f_1 [Azadirachta indica] (50)
| | \-100+
| | \----- Neem_4121_f_1 [Azadirachta indica] (68)
/-100+ |
| | \------------------------------------ evm.model.supercontig_131.79 [Carica papaya] (29)
| |
/-100-+ \----------------------------------------- Eucgr.F03286.1.p [Eucalyptus grandis] (51)
| |
| \---------------------------------------------- Eucgr.K01085.1.p [Eucalyptus grandis] (9)
|
| /----- Neem_23027_f_1 [Azadirachta indica] (20)
/-99-+ /-100+
| | | \----- Neem_2566_f_3 [Azadirachta indica] (66)
| | /-99-+
| | | \---------- Ciclev10015966m [Citrus clementina] (46)
/-100+ \-----------------99-----------------+
| | \--------------- Thecc1EG003607t1 [Theobroma cacao] (59)
| |
--90-+ \--------------------------------------------------------- evm.model.supercontig_209.8 [Carica papaya] (63)
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| /----- XP_010524047.1 [Tarenaya hassleriana] (6)
\---------------------------100--------------------------+
\----- XP_010552219.1 [Tarenaya hassleriana] (65)
Subtree rooted at node 129:
/---------------------------------------------------- AA61G00245 [Aethionema arabicum] (3)
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| /--------------------- KFK35037.1 [Arabis alpina] (7)
| |
| | /---------- AT3G58120.1 [Arabidopsis thaliana] (12)
| | |
| | /-98-+ /----- Araha.3845s0008.1.p [Arabidopsis halleri] (19)
| /-----------70-----------+ | \-64-+
| | | | \----- 486262 [Arabidopsis lyrata] (61)
| | | |
| | | | /----- Cagra.0686s0029.1.p [Capsella grandiflora] (17)
| | \-100-+ /-100+
/-100+ | | | \----- Carubv10017617m [Capsella rubella] (37)
| | | | |
| | | | |---------- Bostr.20903s0063.1.p [Boechera stricta] (24)
| | | \-100+
| | | | /----- Csa09g070700.1 [Camelina sativa] (45)
| | | | |
| | | \-95-+----- Csa04g044650.1 [Camelina sativa] (57)
| | | |
| | | \----- Csa06g033960.1 [Camelina sativa] (77)
| | |
| | | /----- XP_013588300.1 [Brassica oleracea] (11)
| | | /-99-+
| \--99-+ | \----- GSBRNA2T00105790001 [Brassica napus] (44)
| | /-----------100-----------+
| | | \---------- XP_009104108.1 [Brassica rapa] (30)
| | |
| | | /----- Rsa1.0_05805.1_g00001.1 [Raphanus sativus] (13)
| | | /------100------+
/-100+ | | | \----- RrC30030_p1 [Raphanus raphanistrum] (60)
| | | | |
| | | | | /----- GSBRNA2T00121911001 [Brassica napus] (21)
| | | /-98-+ | /-71-+
| | | | | /-100+ | \----- XP_009116504.1 [Brassica rapa] (34)
| | | | | | | /-82-+
| | | | | | | | | /----- GSBRNA2T00155741001 [Brassica napus] (36)
| | | | | | | | \-100+
| | | | | /-66-+ \-100-+ \----- XP_013605646.1 [Brassica oleracea] (54)
| | | | | | | |
--100+ | \-97-+ | | | \--------------- RrC79_p10 [Raphanus raphanistrum] (31)
| | | \-98-+ |
| | | | \-------------------------- Tp5g04600 [Thellungiella parvula] (55)
| | | |
| | | \------------------------------- 676754756 [Sisymbrium irio] (41)
| | |
| | \----------------------------------------- Thhalv10006090m [Eutrema salsugineum] (58)
| |
| \--------------------------------------------------------- (127)
|
\-------------------------------------------------------------- AA21G00036 [Aethionema arabicum] (10)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00058357001 [Brassica napus] (1)
|
|------------------------------------------------------------------- XP_009133535.1 [Brassica rapa] (73)
|
| /------ RrC156_p6 [Raphanus raphanistrum] (2)
| /----------100----------+
| | \------ Rsa1.0_00469.1_g00001.1 [Raphanus sativus] (18)
| |
| | /------ GSBRNA2T00042313001 [Brassica napus] (16)
| | /-100-+
| /--------100-------+ | \------ XP_013631311.1 [Brassica oleracea] (38)
| | | /-100-+
| | | | \------------ GSBRNA2T00140933001 [Brassica napus] (33)
| | | /--65-+
| | | | \------------------ XP_009142832.1 [Brassica rapa] (28)
| | \-100-+
| | \------------------------ GSBRNA2T00132723001 [Brassica napus] (74)
| |
| | /------ (129)
| | /-----------89----------+
| | | \------ KFK37054.1 [Arabis alpina] (15)
| | |
+ | | /------ Csa05g009210.1 [Camelina sativa] (23)
| | | /--66-+
| | | | \------ Csa04g057930.1 [Camelina sativa] (40)
| /-100-+ | /-100-+
| | | /--99--+ | \------------ Csa06g048430.1 [Camelina sativa] (35)
| | | | | /-100-+
| | | | | | | /------ Carubv10023644m [Capsella rubella] (67)
| | | | | | \----100----+
| | | | | | \------ Cagra.2636s0024.1.p [Capsella grandiflora] (75)
| | | | | |
| | | | \-100-+ /------ Araha.0018s0016.1.p [Arabidopsis halleri] (32)
| | | | | /-100-+
| | | /--64-+ | | \------ 483330 [Arabidopsis lyrata] (53)
| | | | | | /--97-+
| /-100-+ | | | | | \------------ AT2G42380.2 [Arabidopsis thaliana] (39)
| | | | | | \--95-+
| | | | | | \------------------ Bostr.18722s0001.1.p [Boechera stricta] (64)
| | | \--72-+ |
| | | | | /------ Tp4g24530 [Thellungiella parvula] (25)
| | | | \--------------67--------------+
| | | | \------ 676742290 [Sisymbrium irio] (62)
| | | |
\-100-+ | \------------------------------------------- Thhalv10016923m [Eutrema salsugineum] (5)
| |
| | /------ Rsa1.0_03407.1_g00003.1 [Raphanus sativus] (52)
| \-----------------------100----------------------+
| \------ RrC2685_p1 [Raphanus raphanistrum] (70)
|
| /------ XP_013622837.1 [Brassica oleracea] (8)
\--------------------------100-------------------------+
\------ GSBRNA2T00019164001 [Brassica napus] (27)
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