![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1779
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 149:
/----- Rsa1.0_00703.1_g00004.1 [Raphanus sativus] (8)
/-100+
| \----- RrC2305_p2 [Raphanus raphanistrum] (11)
/-68-+
| \---------- GSBRNA2T00125310001 [Brassica napus] (67)
/----100---+
| | /----- XP_009134895.1 [Brassica rapa] (28)
| \---100---+
| \----- GSBRNA2T00111860001 [Brassica napus] (44)
|
| /--------------- GSBRNA2T00027078001 [Brassica napus] (18)
/-98-+ |
| | | /----- XP_013638316.1 [Brassica oleracea] (37)
| | /-100-+ /-100+
| | | | | \----- GSBRNA2T00120085001 [Brassica napus] (76)
| | | \-100+
| \-100+ \---------- XP_009129667.1 [Brassica rapa] (57)
| |
| | /----- Rsa1.0_02180.1_g00003.1 [Raphanus sativus] (33)
/-100+ \------100------+
| | \----- RrC53_p3 [Raphanus raphanistrum] (42)
| |
| | /----- Rsa1.0_00030.1_g00013.1 [Raphanus sativus] (31)
| | /---100---+
| | | \----- RrC2860_p1 [Raphanus raphanistrum] (47)
| | |
/-100+ \------100------+ /----- GSBRNA2T00006039001 [Brassica napus] (71)
| | | /-100+
| | | | \----- XP_009124920.1 [Brassica rapa] (81)
| | \-100+
/-100+ | \---------- XP_013623284.1 [Brassica oleracea] (82)
| | |
| | \------------------------------------ 676720476 [Sisymbrium irio] (83)
/-100-+ |
| | \----------------------------------------- Tp3g05330 [Thellungiella parvula] (40)
| |
| \---------------------------------------------- Thhalv10020686m [Eutrema salsugineum] (32)
|
| /----- Cagra.0922s0006.1.p [Capsella grandiflora] (14)
| /---100---+
| | \----- Carubv10013665m [Capsella rubella] (56)
/-86-+ |
| | /-100-+ /----- Csa19g010070.1 [Camelina sativa] (15)
| | | | /-97-+
| | | | | \----- Csa01g007430.1 [Camelina sativa] (65)
| | /-86-+ \-100+
| | | | \---------- Csa15g007970.1 [Camelina sativa] (17)
| | | |
| | | \--------------------- Bostr.2570s0019.1.p [Boechera stricta] (63)
/-86-+ \------------86-----------+
| | | /---------- AT3G06410.1 [Arabidopsis thaliana] (64)
| | | |
| | \-------90------+ /----- 477944 [Arabidopsis lyrata] (85)
| | \-100+
--85-+ | \----- Araha.6616s0011.1.p [Arabidopsis halleri] (86)
| |
| \--------------------------------------------------------- KFK38099.1 [Arabis alpina] (69)
|
\-------------------------------------------------------------- AA29G00028 [Aethionema arabicum] (79)
Subtree rooted at node 154:
/----- XP_010524751.1 [Tarenaya hassleriana] (2)
/-64-+
| \----- XP_010546925.1 [Tarenaya hassleriana] (72)
/----------------------100---------------------+
| \---------- XP_010558473.1 [Tarenaya hassleriana] (7)
|
| /----- XP_013622850.1 [Brassica oleracea] (4)
| /-100+
| | \----- GSBRNA2T00140710001 [Brassica napus] (16)
| /-100+
| | | /----- XP_009131673.1 [Brassica rapa] (38)
| | \-100+
| | \----- GSBRNA2T00149029001 [Brassica napus] (60)
| /-100-+
| | | /---------- Rsa1.0_52763.1_g00001.1 [Raphanus sativus] (53)
| | | |
| | \-100+ /----- Rsa1.0_03446.1_g00003.1 [Raphanus sativus] (75)
| /----83---+ \-84-+
| | | \----- RrC38_p5 [Raphanus raphanistrum] (84)
| | |
| | \--------------------- 676708078 [Sisymbrium irio] (24)
| |
| | /----- GSBRNA2T00078356001 [Brassica napus] (5)
| | /-100+
| | | \----- XP_013606670.1 [Brassica oleracea] (12)
| | /-100+
| | | | /----- GSBRNA2T00154398001 [Brassica napus] (54)
| | | \-99-+
| | /-100-+ \----- XP_009120963.1 [Brassica rapa] (59)
| /-100+ | |
| | | | | /----- RrC5597_p1 [Raphanus raphanistrum] (50)
| | | | \---100---+
| | | | \----- Rsa1.0_00284.1_g00025.1 [Raphanus sativus] (51)
| | | /-91-+
| | | | | /----- Rsa1.0_00550.1_g00011.1 [Raphanus sativus] (20)
| | | | | /---100---+
/-100+ | | | | | \----- RrC4325_p1 [Raphanus raphanistrum] (55)
| | | | | | |
| | | | | \-100-+ /----- GSBRNA2T00114745001 [Brassica napus] (25)
| | /-100+ | | | /-100+
| | | | \-99-+ | | \----- XP_013616843.1 [Brassica oleracea] (74)
| | | | | \-92-+
| | | | | | /----- GSBRNA2T00023127001 [Brassica napus] (34)
| | | | | \-100+
| | | | | \----- XP_009126264.1 [Brassica rapa] (39)
| | | | |
| | | | \-------------------------- Tp6g25780 [Thellungiella parvula] (66)
| | | |
| | | \------------------------------------ Thhalv10013460m [Eutrema salsugineum] (45)
| | |
| | | /----- 488738 [Arabidopsis lyrata] (6)
| | | /-100+
| | /-100+ | \----- Araha.4425s0032.1.p [Arabidopsis halleri] (41)
| | | | /---------100--------+
| | | | | \---------- AT5G18550.1 [Arabidopsis thaliana] (30)
| | | | |
| | | | | /----- Csa13g021460.1 [Camelina sativa] (26)
| | | | | /-100+
--71-+ | | | | | \----- Csa13g021450.1 [Camelina sativa] (27)
| | | | | /-100+
| | | | /-100+ | \---------- Csa08g011090.1 [Camelina sativa] (73)
| | | | | | /-100-+
| | /--86-+ | | | | \--------------- Csa20g026940.1 [Camelina sativa] (80)
| | | | | | | /-100+
| | | | | | | | | /----- Cagra.0712s0020.1.p [Capsella grandiflora] (29)
| | | | \-72-+ | | \------100------+
| | | | | \-100+ \----- Carubv10000876m [Capsella rubella] (77)
| | | | | |
| \-84-+ | | \-------------------------- Bostr.26527s0356.1.p [Boechera stricta] (70)
| | | |
| | | \------------------------------------ KFK26093.1 [Arabis alpina] (10)
| | |
| | \---------------------------------------------- AA40G00257 [Aethionema arabicum] (36)
| |
| \---------------------------------------------------- (149)
|
| /----- EcC045502.50 [Eucalyptus camaldulensis] (13)
| /-100+
| | \----- Eucgr.H03871.1.p [Eucalyptus grandis] (43)
\-------------------------77------------------------+
\---------- Eucgr.B01280.1.p [Eucalyptus grandis] (22)
Root part of tree:
/------------------------------------------------------------------- Gh_D01G2271 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.002G027000.1 [Gossypium raimondii] (61)
|
| /----------------------------- (154)
| |
| | /---------- Ciclev10004882m [Citrus clementina] (3)
| /---100--+ /---100--+
| | | | \---------- orange1.1g011853m [Citrus sinensis] (78)
| | \---100---+
| /----70---+ \------------------- Neem_2496_f_3 [Azadirachta indica] (48)
| | |
+ | \-------------------------------------- Thecc1EG021166t1 [Theobroma cacao] (49)
| |
| | /---------- Gh_A10G1439 [Gossypium hirsutum] (9)
| | /---100--+
| /---100--+ | \---------- Cotton_A_34319_BGI-A2_v1.0 [Gossypium arboreum] (58)
| | | /---100---+
| | | | | /---------- Gorai.011G188400.1 [Gossypium raimondii] (35)
| | | | \---92---+
| | | | \---------- Gh_D10G1681 [Gossypium hirsutum] (62)
| | \--------98--------+
| | | /---------- Gorai.005G058800.1 [Gossypium raimondii] (21)
| | | /---100--+
\---100---+ | | \---------- Gh_D02G0519 [Gossypium hirsutum] (23)
| \---100---+
| | /---------- Gh_A02G0464 [Gossypium hirsutum] (46)
| \---100--+
| \---------- Cotton_A_04878_BGI-A2_v1.0 [Gossypium arboreum] (52)
|
| /---------- Cotton_A_17824_BGI-A2_v1.0 [Gossypium arboreum] (19)
\----------------------93----------------------+
\---------- Gh_A01G0196 [Gossypium hirsutum] (68)
|




