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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1780
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 139:
/----- Thhalv10020717m [Eutrema salsugineum] (3)
/----------------------100---------------------+
| \----- Thhalv10020745m [Eutrema salsugineum] (22)
|
| /----- GSBRNA2T00072913001 [Brassica napus] (4)
| /-100+
| | \----- GSBRNA2T00004863001 [Brassica napus] (53)
| /-100+
| | \---------- XP_009122861.1 [Brassica rapa] (44)
| /-100-+
| | \--------------- XP_013590798.1 [Brassica oleracea] (27)
| /-100+
| | | /----- RrC6409_p2 [Raphanus raphanistrum] (19)
| | \------100------+
| | \----- Rsa1.0_00951.1_g00018.1 [Raphanus sativus] (34)
| |
| | /----- GSBRNA2T00072911001 [Brassica napus] (5)
| /-100+ |
| | | /-100+----- GSBRNA2T00072912001 [Brassica napus] (39)
| | | | |
| | | /-100+ \----- XP_009122872.1 [Brassica rapa] (51)
| | | | |
| | | | \---------- XP_013591746.1 [Brassica oleracea] (37)
| /-66-+ \----100---+
| | | | /----- Rsa1.0_00951.1_g00019.1 [Raphanus sativus] (56)
| | | \---100---+
| | | \----- RrC6409_p3 [Raphanus raphanistrum] (78)
| | |
| | \------------------------------- 676764946 [Sisymbrium irio] (74)
| |
/-78-+ | /----- Rsa1.0_01363.1_g00003.1 [Raphanus sativus] (10)
| | | /---100---+
| | /-76-+ | \----- RrC1756_p2 [Raphanus raphanistrum] (69)
| | | | |
| | | | /-100-+ /----- XP_013623093.1 [Brassica oleracea] (40)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00110506001 [Brassica napus] (59)
| | | | | \-100+
| | | | | | /----- XP_009135111.1 [Brassica rapa] (45)
| | | | | \-100+
| | | | | \----- GSBRNA2T00111649001 [Brassica napus] (72)
| | | \------99------+
| | | | /----- XP_013622519.1 [Brassica oleracea] (13)
| | | | /-100+
| | | | | \----- GSBRNA2T00110507001 [Brassica napus] (63)
| | | | /-100+
| | | | | | /----- GSBRNA2T00111648001 [Brassica napus] (14)
| | | | | \-100+
| | /-91-+ \-100-+ \----- XP_009135112.1 [Brassica rapa] (48)
| | | | |
| | | | | /----- RrC1756_p1 [Raphanus raphanistrum] (24)
/-85-+ | | | \---100---+
| | | | | \----- Rsa1.0_01363.1_g00002.1 [Raphanus sativus] (76)
| | | | |
| | | | | /----- GSBRNA2T00110954001 [Brassica napus] (6)
| | | | | /-100+
| | | | | | \----- XP_013586773.1 [Brassica oleracea] (35)
| | | | | /-100+
| | \--83-+ | | | /----- GSBRNA2T00000394001 [Brassica napus] (20)
| | | | | \-99-+
| | | | /-100-+ \----- XP_009146834.1 [Brassica rapa] (55)
| | | | | |
| | | | | | /----- Rsa1.0_00544.1_g00004.1 [Raphanus sativus] (11)
| | | \---------96--------+ \---100---+
| | | | \----- RrC16977_p1 [Raphanus raphanistrum] (25)
| | | |
| | | \--------------------- 676764948 [Sisymbrium irio] (43)
| | |
| | \---------------------------------------------- Tp3g08750 [Thellungiella parvula] (38)
| |
| | /----- KFK38437.1 [Arabis alpina] (33)
| \-------------------------98------------------------+
| \----- Tp3g08740 [Thellungiella parvula] (41)
|
| /----- GSBRNA2T00004862001 [Brassica napus] (7)
| /-100+
| | \----- EcS744841.10 [Eucalyptus camaldulensis] (80)
| /-100+
| | \---------- Eucgr.G02740.1.p [Eucalyptus grandis] (42)
| |
| /-------86------+ /----- Neem_17921_f_1 [Azadirachta indica] (9)
| | | /-100+
| | | | \----- Neem_13860_f_1 [Azadirachta indica] (79)
| | \-100+
--91-+ | | /----- Ciclev10031606m [Citrus clementina] (46)
| | \-100+
| | \----- orange1.1g014130m [Citrus sinensis] (60)
| |
| | /----- Gh_A05G2509 [Gossypium hirsutum] (15)
| | /-99-+
| | | \----- Cotton_A_29173_BGI-A2_v1.0 [Gossypium arboreum] (58)
| | /-100+
| | | | /----- Gh_D05G2787 [Gossypium hirsutum] (26)
| /-64-+ | \-100+
| | | | \----- Gorai.009G309300.1 [Gossypium raimondii] (73)
| | | /--67-+
| | | | | /----- Gh_A10G1796 [Gossypium hirsutum] (49)
| | | | | /-100+
| | | | | | \----- Cotton_A_32478_BGI-A2_v1.0 [Gossypium arboreum] (61)
| | | | \-100+
| | | /-90-+ | /----- Gorai.011G234200.1 [Gossypium raimondii] (67)
| | | | | \-96-+
| | | | | \----- Gh_D10G2538 [Gossypium hirsutum] (75)
| | | | |
| /-88-+ | | \--------------------- Thecc1EG043357t1 [Theobroma cacao] (62)
| | | \-100+
| | | | /----- Gorai.012G007000.1 [Gossypium raimondii] (16)
| | | | /-76-+
| | | | | \----- Gh_D04G0050 [Gossypium hirsutum] (57)
| | | \------100------+
| /-72-+ | | /----- Gh_A05G3555 [Gossypium hirsutum] (29)
| | | | \-100+
| | | | \----- Cotton_A_06086_BGI-A2_v1.0 [Gossypium arboreum] (68)
| | | |
| | | \------------------------------------ evm.model.supercontig_53.164 [Carica papaya] (17)
| | |
\-------96------+ \----------------------------------------- KFK24890.1 [Arabis alpina] (52)
|
| /----- XP_010552945.1 [Tarenaya hassleriana] (36)
|-------------------100------------------+
| \----- XP_010543579.1 [Tarenaya hassleriana] (70)
|
\---------------------------------------------- AA12G00161 [Aethionema arabicum] (54)
Root part of tree:
/------------------------------------------------------------------- Araha.4954s0010.1.p [Arabidopsis halleri] (1)
|
|------------------------------------------------------------------- 317848 [Arabidopsis lyrata] (32)
|
| /------ Cagra.0834s0029.1.p [Capsella grandiflora] (2)
| /-----------------100----------------+
| | \------ Carubv10013694m [Capsella rubella] (28)
| |
| | /------------------------------------- (139)
| | |
| /--97-+ | /------ Csa19g014120.1 [Camelina sativa] (8)
| | | | /--90-+
| | | | | \------ Csa01g011370.1 [Camelina sativa] (65)
| | | | /-100-+
| | | | | \------------ Csa15g013990.1 [Camelina sativa] (77)
| | \-100-+ /-100-+
+ | | | | /------ Cagra.0834s0028.1.p [Capsella grandiflora] (12)
| | | | \----100----+
| | | /--99-+ \------ Carubv10013564m [Capsella rubella] (31)
| /--99-+ | | |
| | | | | \------------------------ Bostr.22252s0011.1.p [Boechera stricta] (30)
| | | | |
| | | \--100-+ /------ Araha.4954s0011.1.p [Arabidopsis halleri] (18)
| | | | /-100-+
| | | | | \------ 478382 [Arabidopsis lyrata] (23)
| | | \-------100-------+
| /-100-+ | \------------ AT3G10490.2 [Arabidopsis thaliana] (47)
| | | |
| | | \------------------------------------------------- Bostr.22252s0012.1.p [Boechera stricta] (71)
| | |
| | | /------------ Csa19g014110.1 [Camelina sativa] (21)
\--97-+ | |
| \--------------------100-------------------+ /------ Csa01g011360.1 [Camelina sativa] (50)
| \--67-+
| \------ Csa15g013970.1 [Camelina sativa] (66)
|
\------------------------------------------------------------- AT3G10480.3 [Arabidopsis thaliana] (64)
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