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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1782
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 144:
/--------------- Rsa1.0_00058.1_g00008.1 [Raphanus sativus] (3)
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| /----- GSBRNA2T00015984001 [Brassica napus] (10)
/--81-+ /-100+
| | | \----- XP_009122445.1 [Brassica rapa] (16)
| \-99-+
/-100+ \---------- XP_013606794.1 [Brassica oleracea] (62)
| |
| \--------------------- KFK25193.1 [Arabis alpina] (50)
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| /---------- GSBRNA2T00129692001 [Brassica napus] (14)
| |
| |---------- XP_009131055.1 [Brassica rapa] (42)
/-100+ /-100+
| | | | /----- XP_013630257.1 [Brassica oleracea] (67)
| | | \-100+
| | /-100-+ \----- GSBRNA2T00134540001 [Brassica napus] (84)
| | | |
| | | | /----- Rsa1.0_09702.1_g00001.1 [Raphanus sativus] (31)
| | | \---100---+
| \-60-+ \----- RrC1078_p3 [Raphanus raphanistrum] (77)
| |
| | /----- Tp6g34620 [Thellungiella parvula] (30)
| \-------84------+
| \----- 676744174 [Sisymbrium irio] (74)
|
/-53-+ /----- Rsa1.0_00657.1_g00006.1 [Raphanus sativus] (11)
| | /---100---+
| | | \----- RrC32_p14 [Raphanus raphanistrum] (63)
| | |
| |-------91------+ /----- GSBRNA2T00080768001 [Brassica napus] (21)
| | | /-63-+
| | | | \----- XP_013621571.1 [Brassica oleracea] (81)
| | \-100+
| | | /----- GSBRNA2T00071649001 [Brassica napus] (32)
| | \-87-+
| | \----- XP_009125727.1 [Brassica rapa] (45)
| |
| \------------------------------- Thhalv10014503m [Eutrema salsugineum] (73)
|
| /----- Carubv10001850m [Capsella rubella] (17)
| /---100---+
| | \----- Cagra.1365s0040.1.p [Capsella grandiflora] (24)
| |
/-70-+ /--62-+ /----- Csa13g010370.1 [Camelina sativa] (40)
| | | | /-98-+
| | | | | \----- Csa20g011780.1 [Camelina sativa] (53)
| | /-64-+ \-63-+
| | | | \---------- Csa08g056030.1 [Camelina sativa] (56)
| | | |
| |----64---+ \--------------------- Bostr.13129s0127.1.p [Boechera stricta] (34)
| | |
| | | /----- 908782 [Arabidopsis lyrata] (48)
| | \---------100--------+
| | \----- AT5G08330.1 [Arabidopsis thaliana] (78)
| |
| | /----- Neem_3188_f_1 [Azadirachta indica] (20)
/-80-+ | /------100------+
| | | | \----- Thecc1EG042116t1 [Theobroma cacao] (33)
| | | |
| | | | /----- Gh_A13G2021 [Gossypium hirsutum] (29)
| | | | /-80-+
| | \------100-----+ | \----- Cotton_A_10509_BGI-A2_v1.0 [Gossypium arboreum] (37)
| | | /-100+
| | | | | /----- Gorai.013G268200.1 [Gossypium raimondii] (35)
| | | | \-66-+
| | \--51-+ \----- Gh_D13G2419 [Gossypium hirsutum] (76)
| | |
| | \--------------- XP_010535618.1 [Tarenaya hassleriana] (47)
| |
| \----------------------------------------- AA44G00156 [Aethionema arabicum] (4)
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| /---------- Gh_D13G0602 [Gossypium hirsutum] (5)
| |
| | /----- Cotton_A_26482_BGI-A2_v1.0 [Gossypium arboreum] (28)
| /-98-+-96-+
| | | \----- Gh_A13G0528 [Gossypium hirsutum] (68)
| | |
| | \---------- Gorai.013G068600.1 [Gossypium raimondii] (52)
/--53-+ |
| | | /----- Gh_D12G1337 [Gossypium hirsutum] (23)
| | | /-95-+
| | /--57-+ | \----- Gorai.008G147800.1 [Gossypium raimondii] (55)
| | | |-100+
| | | | | /----- Gh_A12G1214 [Gossypium hirsutum] (36)
| | | | \-77-+
| | | | \----- Cotton_A_14593_BGI-A2_v1.0 [Gossypium arboreum] (44)
| | | |
| | /-91-+ \--------------- Thecc1EG007700t1 [Theobroma cacao] (60)
| | | |
| | | | /----- Gh_D02G1925 [Gossypium hirsutum] (7)
| | | | /-99-+
| | | | | \----- Gorai.005G211900.1 [Gossypium raimondii] (25)
| | | \----100---+
| | | | /----- Gh_A03G1464 [Gossypium hirsutum] (18)
/-96-+ | /-91-+ \-100+
| | | | | \----- Cotton_A_08973_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | | | |
| | | | | /---------- Neem_10310_f_2 [Azadirachta indica] (12)
| | | | | |
| | | | | /-100+ /----- orange1.1g024547m [Citrus sinensis] (26)
| | \------91------+ | | \-100+
| | | \----79----+ \----- Ciclev10032441m [Citrus clementina] (54)
| | | |
| | | \--------------- evm.model.supercontig_60.75 [Carica papaya] (82)
| | |
| | | /----- XP_010546439.1 [Tarenaya hassleriana] (71)
/-97-+ | \-----------100-----------+
| | | \----- XP_010521856.1 [Tarenaya hassleriana] (72)
| | |
| | \---------------------------------------------------- AA5G00219 [Aethionema arabicum] (19)
| |
| | /---------- GSBRNA2T00086429001 [Brassica napus] (41)
| | |
| | /-100+ /----- XP_013618051.1 [Brassica oleracea] (43)
--56-+ | | \-100+
| | /-100-+ \----- GSBRNA2T00071717001 [Brassica napus] (49)
| | | |
| \----------------100----------------+ \--------------- XP_009130117.1 [Brassica rapa] (46)
| |
| \--------------------- Rsa1.0_05545.1_g00002.1 [Raphanus sativus] (61)
|
\-------------------------------------------------------------- Tp2g23870 [Thellungiella parvula] (13)
Root part of tree:
/------------------------------------------------------------------- XP_009141469.1 [Brassica rapa] (1)
|
|------------------------------------------------------------------- GSBRNA2T00094728001 [Brassica napus] (39)
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| /------ XP_013597847.1 [Brassica oleracea] (2)
| /-100-+
| | \------ GSBRNA2T00082683001 [Brassica napus] (22)
| /-100-+
| | | /------ GSBRNA2T00147414001 [Brassica napus] (38)
| | \--95-+
| /--------------100-------------+ \------ XP_009150861.1 [Brassica rapa] (64)
| | |
| | \------------------ Rsa1.0_00302.1_g00018.1 [Raphanus sativus] (80)
| |
| | /------------------------------------------- (144)
| | |
| | | /------ Csa20g038220.1 [Camelina sativa] (6)
| | | /--92-+
| | | | \------ Csa13g027860.1 [Camelina sativa] (15)
| | | /-100-+
+ | | | \------------ Csa08g017630.1 [Camelina sativa] (83)
| | | /-100-+
| | | | | /------ Carubv10001541m [Capsella rubella] (8)
| |--90-+ | \----100----+
| /--99-+ | | \------ Cagra.4348s0009.1.p [Capsella grandiflora] (9)
| | | | /--76-+
| | | | | | /------------ AT5G23280.1 [Arabidopsis thaliana] (27)
| | | | | | |
| | | | | \-----86----+ /------ 489189 [Arabidopsis lyrata] (59)
| | | | /--100-+ \--53-+
| | | | | | \------ Araha.9462s0010.1.p [Arabidopsis halleri] (69)
| | | | | |
| | | \--51-+ \------------------------------ Bostr.10199s0106.1.p [Boechera stricta] (51)
| /-100-+ | |
| | | | | /------ Thhalv10004796m [Eutrema salsugineum] (57)
| | | | \--------------59--------------+
| | | | \------ KFK39192.1 [Arabis alpina] (65)
| | | |
| | | \------------------------------------------------- 676729508 [Sisymbrium irio] (58)
| | |
\--85-+ | /------ Rsa1.0_00056.1_g00052.1 [Raphanus sativus] (70)
| \-----------------------99-----------------------+
| \------ RrC4527_p3 [Raphanus raphanistrum] (85)
|
|------------------------------------------------------------- XP_013606593.1 [Brassica oleracea] (75)
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\------------------------------------------------------------- GSBRNA2T00146105001 [Brassica napus] (79)
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