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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1806
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 141:
/---------------------------------------------------- XP_010549297.1 [Tarenaya hassleriana] (2)
|
| /----- Ciclev10032547m [Citrus clementina] (3)
| /-100+
| | \----- orange1.1g030727m [Citrus sinensis] (66)
| /---------100--------+
| | \---------- Neem_7280_f_1 [Azadirachta indica] (70)
| |
| | /--------------------- Thecc1EG008477t1 [Theobroma cacao] (6)
| | |
| | | /----- Gh_A03G1332 [Gossypium hirsutum] (13)
| | | /-100+
| | /-68-+ | \----- Cotton_A_10022_BGI-A2_v1.0 [Gossypium arboreum] (56)
| | | | /-100+
| | | | | | /----- Gorai.005G195300.1 [Gossypium raimondii] (54)
| | | | | \-79-+
| | | \-100-+ \----- Gh_D02G1769 [Gossypium hirsutum] (82)
| | | |
| | | | /----- Cotton_A_10020_BGI-A2_v1.0 [Gossypium arboreum] (18)
| |-99-+ \---100---+
| /------78------+ | \----- Gh_A03G1333 [Gossypium hirsutum] (68)
| | | |
| | | | /----- Cotton_A_24945_BGI-A2_v1.0 [Gossypium arboreum] (10)
| | | | /-88-+
| | | | | \----- Gh_A04G0868 [Gossypium hirsutum] (59)
| | | \------100------+
| | | | /----- Gorai.012G125500.1 [Gossypium raimondii] (64)
| | | \-91-+
| | | \----- Gh_D04G1368 [Gossypium hirsutum] (83)
| | |
| | | /---------- Eucgr.B03537.1.p [Eucalyptus grandis] (9)
| | | |
| | | /-61-+ /----- EcC010357.20 [Eucalyptus camaldulensis] (21)
| | | | \-100+
| | \-------58------+ \----- Eucgr.H03387.1.p [Eucalyptus grandis] (79)
/-100+ | |
| | | \--------------- evm.model.supercontig_4.138 [Carica papaya] (55)
| | |
| | | /----- RrC17002_p1 [Raphanus raphanistrum] (7)
| | | /---100---+
| | | | \----- Rsa1.0_01310.1_g00012.1 [Raphanus sativus] (43)
| | | |
| | | /----100---+ /----- GSBRNA2T00129913001 [Brassica napus] (37)
| | | | | /-100+
| | | | | | \----- XP_009131323.1 [Brassica rapa] (60)
| | | | \-99-+
| | | | | /----- GSBRNA2T00011094001 [Brassica napus] (71)
| | | | \-100+
| | | | \----- XP_013625587.1 [Brassica oleracea] (85)
| | | |
| | | |-------------------------- Thhalv10014495m [Eutrema salsugineum] (8)
| | | |
| | | | /----- RrC6705_p1 [Raphanus raphanistrum] (11)
| | | | /---100---+
| | | | | \----- Rsa1.0_00083.1_g00011.1 [Raphanus sativus] (48)
| | | | |
| | | | /-100-+ /---------- GSBRNA2T00151934001 [Brassica napus] (14)
| | | | | | |
| | | | | | | /----- XP_009125891.1 [Brassica rapa] (22)
| | | | | \-82-+-55-+
| | | | | | \----- GSBRNA2T00143403001 [Brassica napus] (61)
| | | | | |
| | | | | \---------- XP_013616284.1 [Brassica oleracea] (62)
| | | | |
| | | | | /----- XP_009121790.1 [Brassica rapa] (17)
| | | |-95-+ /-100+
| | | | | | \----- GSBRNA2T00135689001 [Brassica napus] (73)
| | | | |----66----+
| | | | | | /----- GSBRNA2T00031473001 [Brassica napus] (20)
| | | | | \-100+
| \-100-+ /-87-+ | \----- XP_013608832.1 [Brassica oleracea] (41)
| | | | |
| | | | | /----- Rsa1.0_03245.1_g00001.1 [Raphanus sativus] (39)
| | | | \------100------+
| | | | \----- RrC3014_p3 [Raphanus raphanistrum] (81)
| | | |
| | | | /----- Carubv10002548m [Capsella rubella] (12)
| | | | /------100------+
| | | | | \----- Cagra.0596s0010.1.p [Capsella grandiflora] (35)
/-91-+ | | | |
| | | | |-98-+ /--------------- Bostr.2902s0053.1.p [Boechera stricta] (28)
| | | | | | |
| | | | | \--82-+ /---------- Csa13g015790.1 [Camelina sativa] (29)
| | | | | | |
| | | | | \-100+ /----- Csa08g005060.1 [Camelina sativa] (49)
| | | | | \-98-+
| | | /-84-+ | \----- Csa20g018530.1 [Camelina sativa] (53)
| | | | | |
| | | | | |-------------------------- AA44G00526 [Aethionema arabicum] (23)
| | | | | |
| | | | | |-------------------------- Tp6g30800 [Thellungiella parvula] (46)
| | | | | |
| | | | | |-------------------------- 676766034 [Sisymbrium irio] (50)
| | | | | |
| | | | | |-------------------------- 909271 [Arabidopsis lyrata] (63)
| | | /-86-+ | |
| | | | | | |-------------------------- AT5G13180.1 [Arabidopsis thaliana] (67)
| | | | | | |
| | | | | | \-------------------------- Araha.8686s0001.1.p [Arabidopsis halleri] (69)
| | | | | |
| | | | | | /----- XP_010521426.1 [Tarenaya hassleriana] (31)
| | |-86-+ | \-----------100-----------+
| | | | | \----- XP_010533371.1 [Tarenaya hassleriana] (45)
| | | | |
| | | | \------------------------------------ XP_010530936.1 [Tarenaya hassleriana] (34)
| | | |
--90-+ | | \----------------------------------------- XP_010556110.1 [Tarenaya hassleriana] (33)
| | |
| | | /----- Gorai.011G087700.1 [Gossypium raimondii] (16)
| | | /-93-+
| | | | \----- Gh_D10G0772 [Gossypium hirsutum] (52)
| | | /-100+
| | | | \---------- Cotton_A_07511_BGI-A2_v1.0 [Gossypium arboreum] (47)
| | | |
| | | | /----- XP_010528149.1 [Tarenaya hassleriana] (19)
| | |--------------71--------------+---100---+
| | | | \----- XP_010556306.1 [Tarenaya hassleriana] (65)
| | | |
| | | \--------------- Eucgr.H03362.1.p [Eucalyptus grandis] (80)
| | |
| | \---------------------------------------------- evm.model.supercontig_99.63 [Carica papaya] (84)
| |
| \--------------------------------------------------------- AA3G00274 [Aethionema arabicum] (26)
|
| /--------------- Bostr.23794s0753.1.p [Boechera stricta] (5)
| |
| | /----- Araha.4814s0003.1.p [Arabidopsis halleri] (15)
| /--97-+ /-93-+
| | | | \----- 482294 [Arabidopsis lyrata] (77)
| | \-100+
| | \---------- AT2G33480.1 [Arabidopsis thaliana] (76)
| |
\-------------------100------------------+ /----- Csa16g007760.1 [Camelina sativa] (32)
| /-90-+
| | \----- Csa07g007900.1 [Camelina sativa] (51)
| /-100+
| | \---------- Csa05g022930.1 [Camelina sativa] (74)
\-100-+
| /----- Carubv10023833m [Capsella rubella] (40)
\---100---+
\----- Cagra.0301s0034.1.p [Capsella grandiflora] (58)
Root part of tree:
/------------------------------------------------------------------- RrC3082_p3 [Raphanus raphanistrum] (1)
|
|------------------------------------------------------------------- Rsa1.0_03898.1_g00007.1 [Raphanus sativus] (75)
|
| /-------------------------------------------------- (141)
| |
| | /-------- RrC32112_p1 [Raphanus raphanistrum] (25)
| | /-------100------+
| | | \-------- Rsa1.0_00111.1_g00021.1 [Raphanus sativus] (72)
| | |
+ | /--100--+ /-------- XP_013634266.1 [Brassica oleracea] (27)
| /---100--+ | | /---100--+
| | | | | | \-------- GSBRNA2T00024057001 [Brassica napus] (86)
| | | | \--100--+
| | | /---77---+ | /-------- GSBRNA2T00064615001 [Brassica napus] (38)
| | | | | \---100--+
| | | | | \-------- XP_009141320.1 [Brassica rapa] (78)
| | \---88--+ |
| | | \--------------------------------- Tp4g15820 [Thellungiella parvula] (44)
\--100--+ |
| \------------------------------------------ Thhalv10017152m [Eutrema salsugineum] (36)
|
| /-------- GSBRNA2T00095240001 [Brassica napus] (4)
| /-------74-------+
| | \-------- XP_009143857.1 [Brassica rapa] (57)
| |
\---------------100---------------+ /-------- GSBRNA2T00009100001 [Brassica napus] (24)
| /---100--+
| | \-------- XP_013634581.1 [Brassica oleracea] (42)
\--100--+
\----------------- GSBRNA2T00009098001 [Brassica napus] (30)
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