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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1839
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 118:
/----- XP_013622362.1 [Brassica oleracea] (2)
/-100+
| \----- GSBRNA2T00052631001 [Brassica napus] (48)
/-64-+
| \---------- GSBRNA2T00066735001 [Brassica napus] (55)
/-100-+
| \--------------- XP_009132571.1 [Brassica rapa] (10)
/-100+
| \--------------------- Rsa1.0_01801.1_g00006.1 [Raphanus sativus] (18)
/-99-+
| \-------------------------- 676736814 [Sisymbrium irio] (4)
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| /----- XP_009107820.1 [Brassica rapa] (28)
| /-95-+
/-100+ | \----- GSBRNA2T00110232001 [Brassica napus] (31)
| | /-100+
| | | | /----- XP_013612061.1 [Brassica oleracea] (35)
| | | \-91-+
| \------100------+ \----- GSBRNA2T00023179001 [Brassica napus] (64)
/-100+ |
| | | /----- Rsa1.0_08609.1_g00002.1 [Raphanus sativus] (62)
| | \---100---+
| | \----- RrC5734_p2 [Raphanus raphanistrum] (69)
/-100+ |
| | \------------------------------------ Tp6g14230 [Thellungiella parvula] (47)
| |
| \----------------------------------------- Thhalv10013582m [Eutrema salsugineum] (51)
|
| /----- Csa18g022860.1 [Camelina sativa] (13)
| |
| /-100+----- Csa02g044950.1 [Camelina sativa] (23)
| | |
/--90-+ | \----- Csa11g083620.1 [Camelina sativa] (43)
| | /-100+
| | | | /----- Carubv10026411m [Capsella rubella] (38)
| | | \-100+
| | | \----- Cagra.0094s0010.1.p [Capsella grandiflora] (41)
| | /--97-+
| | | | /----- 495266 [Arabidopsis lyrata] (17)
/-100+ | | | /-100+
| | | | | | \----- Araha.16901s0005.1.p [Arabidopsis halleri] (45)
| | \-----------100----------+ \-100+
| | | \---------- AT5G51980.2 [Arabidopsis thaliana] (37)
| | |
/-100+ | \--------------------- Bostr.15774s0345.1.p [Boechera stricta] (39)
| | |
| | \---------------------------------------------------- KFK26805.1 [Arabis alpina] (3)
| |
| \--------------------------------------------------------- AA55G00051 [Aethionema arabicum] (8)
|
| /----- Gorai.008G281100.1 [Gossypium raimondii] (6)
| /-97-+
| | \----- Gh_D12G2499 [Gossypium hirsutum] (9)
| /----100---+
| | | /----- Cotton_A_01347_BGI-A2_v1.0 [Gossypium arboreum] (7)
| | \-100+
| | \----- Gh_A12G2362 [Gossypium hirsutum] (20)
| /-100+
| | | /--------------- Thecc1EG015076t1 [Theobroma cacao] (16)
| | | |
| | | | /----- Gh_A09G0378 [Gossypium hirsutum] (22)
| | \--92-+ /-53-+
| | | | \----- Cotton_A_38654_BGI-A2_v1.0 [Gossypium arboreum] (36)
| /-92-+ \-100+
| | | | /----- Gorai.006G046100.1 [Gossypium raimondii] (30)
| | | \-99-+
| | | \----- Gh_D09G0400 [Gossypium hirsutum] (68)
| | |
| | | /----- Eucgr.A02838.1.p [Eucalyptus grandis] (44)
--100+ /-72-+ \---------100--------+
| | | \----- EcC029636.20 [Eucalyptus camaldulensis] (58)
| | |
| | | /----- Neem_37184_f_1 [Azadirachta indica] (26)
| | | /-100+
| | | | \----- Neem_11273_f_6 [Azadirachta indica] (49)
| /-96-+ \---------100--------+
| | | | /----- orange1.1g013881m [Citrus sinensis] (33)
| | | \-100+
| | | \----- Ciclev10005002m [Citrus clementina] (66)
| | |
| | \------------------------------------ evm.model.supercontig_4.223 [Carica papaya] (14)
| |
| /-100+ /----- Neem_6451_f_2 [Azadirachta indica] (11)
| | | /---100---+
| | | | \----- Ciclev10024419m [Citrus clementina] (61)
| | | |
| | | | /----- Eucgr.E02500.1.p [Eucalyptus grandis] (12)
| | | | /-60-+
| | | | | \----- Eucgr.E02477.1.p [Eucalyptus grandis] (53)
| | \-----------100-----------+-100+
| | | \---------- Eucgr.E02478.1.p [Eucalyptus grandis] (59)
| | |
| | | /----- Cotton_A_19983_BGI-A2_v1.0 [Gossypium arboreum] (19)
\------100------+ | /-100+
| | | \----- Gh_A10G1336 [Gossypium hirsutum] (56)
| \-100+
| \---------- Thecc1EG001774t1 [Theobroma cacao] (52)
|
| /----- XP_010536494.1 [Tarenaya hassleriana] (25)
| /-100+
| | \----- XP_010536491.1 [Tarenaya hassleriana] (42)
| /-81-+
| | \---------- XP_010555647.1 [Tarenaya hassleriana] (65)
\--------------100-------------+
\--------------- XP_010519221.1 [Tarenaya hassleriana] (63)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00149663001 [Brassica napus] (1)
|
|------------------------------------------------------------------- XP_009139264.1 [Brassica rapa] (40)
|
| /------------------------------------------- (118)
| |
| | /------ Csa12g027720.1 [Camelina sativa] (15)
| | /--81-+
| | | \------ Csa10g017500.1 [Camelina sativa] (57)
| | /-100-+
| | | \------------ Csa11g019100.1 [Camelina sativa] (29)
| | /--99-+
| | | \------------------ Bostr.7867s0357.1.p [Boechera stricta] (60)
| /--93-+ /-100-+
+ | | | | /------ Carubv10004856m [Capsella rubella] (46)
| | | | \-------100-------+
| | | | \------ Cagra.2248s0023.1.p [Capsella grandiflora] (54)
| | | /--100-+
| | | | | /------ 329122 [Arabidopsis lyrata] (24)
| | | | | /--59-+
| /-100-+ | | | | \------ Araha.22764s0004.1.p [Arabidopsis halleri] (27)
| | | \--99-+ \--------68-------+
| | | | \------------ AT4G25440.1 [Arabidopsis thaliana] (34)
| | | |
| /-100-+ | \------------------------------------- Thhalv10025269m [Eutrema salsugineum] (21)
| | | |
| | | \------------------------------------------------- Tp7g23490 [Thellungiella parvula] (50)
| | |
\-100-+ \------------------------------------------------------- 676745734 [Sisymbrium irio] (5)
|
| /------ GSBRNA2T00022552001 [Brassica napus] (32)
\--------------------------97--------------------------+
\------ XP_013618608.1 [Brassica oleracea] (67)
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