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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1893
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131:
/----- RrC3383_p2 [Raphanus raphanistrum] (2)
/---100---+
| \----- Rsa1.0_00016.1_g00082.1 [Raphanus sativus] (58)
|
/-100-+ /----- XP_013609958.1 [Brassica oleracea] (28)
| | /-99-+
| | | \----- GSBRNA2T00104046001 [Brassica napus] (68)
| \-100+
| | /----- XP_009122008.1 [Brassica rapa] (63)
/-100+ \-100+
| | \----- GSBRNA2T00135844001 [Brassica napus] (64)
| |
| |--------------------- Tp6g32520 [Thellungiella parvula] (32)
/-87-+ |
| | \--------------------- 676781796 [Sisymbrium irio] (45)
| |
| \-------------------------- Thhalv10015251m [Eutrema salsugineum] (43)
|
| /----- Csa20g016340.1 [Camelina sativa] (3)
| /-95-+
| | \----- Csa13g013710.1 [Camelina sativa] (15)
| /-100+
| | \---------- Csa08g002100.1 [Camelina sativa] (61)
| /--97-+
| | | /----- Carubv10003340m [Capsella rubella] (20)
/------100-----+ | \---100---+
| | /-100+ \----- Cagra.1398s0037.1.p [Capsella grandiflora] (52)
| | | |
| | | \--------------------- Bostr.13175s0007.1.p [Boechera stricta] (48)
| |-100+
| | | /---------- AT5G10970.1 [Arabidopsis thaliana] (26)
| | | |
| | \------100------+ /----- Araha.36352s0005.1.p [Arabidopsis halleri] (37)
| | \-100+
| | \----- 909054 [Arabidopsis lyrata] (39)
| |
| \------------------------------- KFK25376.1 [Arabis alpina] (17)
|
| /---------- Rsa1.0_01939.1_g00005.1 [Raphanus sativus] (4)
| |
| /------100------+ /----- XP_009151040.1 [Brassica rapa] (6)
| | \-100+
| | \----- GSBRNA2T00147612001 [Brassica napus] (40)
/--87-+ |
| | /-79-+ /--------------------- Rsa1.0_00367.1_g00006.1 [Raphanus sativus] (33)
| | | | |
| | | | | /--------------- Rsa1.0_00051.1_g00016.1 [Raphanus sativus] (38)
| | | \-99-+ |
| | | | | /----- GSBRNA2T00009571001 [Brassica napus] (55)
| | /-96-+ \-100-+ /-100+
| | | | | | \----- XP_009111658.1 [Brassica rapa] (71)
| | | | \-100+
| | | | \---------- XP_013610006.1 [Brassica oleracea] (56)
| | /-91-+ |
| | | | \------------------------------- Tp2g22370 [Thellungiella parvula] (70)
| | | |
| | | \------------------------------------ KFK27776.1 [Arabis alpina] (65)
| | |
| | | /----- Csa20g046330.1 [Camelina sativa] (9)
| | | /-57-+
/-100+ \-100+ | \----- Csa08g022800.1 [Camelina sativa] (16)
| | | /-100+
| | | | \---------- Csa13g031000.1 [Camelina sativa] (10)
| | | /--99-+
| | | | \--------------- Bostr.5763s0007.1.p [Boechera stricta] (31)
| | | |
| | | | /----- Cagra.1945s0011.1.p [Capsella grandiflora] (14)
| | \--------100--------+ /---100---+
| | | | \----- Carubv10001837m [Capsella rubella] (22)
| | | |
/-100+ | \-100-+ /---------- AT5G25160.1 [Arabidopsis thaliana] (27)
| | | | |
| | | \-100+ /----- 910560 [Arabidopsis lyrata] (34)
| | | \-100+
| | | \----- Araha.8220s0005.1.p [Arabidopsis halleri] (57)
| | |
| | | /----- XP_010541579.1 [Tarenaya hassleriana] (19)
| | \----------------------100---------------------+
| | \----- XP_010519603.1 [Tarenaya hassleriana] (49)
| |
| \--------------------------------------------------------- evm.model.supercontig_127.8 [Carica papaya] (29)
|
| /---------- Gh_D06G1969 [Gossypium hirsutum] (8)
| |
| |---------- Gorai.010G222700.1 [Gossypium raimondii] (41)
| /-100+
| | | /----- Cotton_A_35683_BGI-A2_v1.0 [Gossypium arboreum] (44)
| | \-100+
| | \----- Gh_A06G1920 [Gossypium hirsutum] (53)
| /--95-+
| | | /----- Gh_D05G1143 [Gossypium hirsutum] (12)
| | | /-100+
--100+ | | | \----- Gorai.009G124600.1 [Gossypium raimondii] (46)
| | \-100+
| /-100+ | /----- Gh_A05G1026 [Gossypium hirsutum] (54)
| | | \-100+
| | | \----- Cotton_A_17077_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | |
| /-95-+ \--------------------- Thecc1EG027404t1 [Theobroma cacao] (36)
| | |
| | | /---------- Neem_4234_f_2 [Azadirachta indica] (11)
| | | |
| /-53-+ \-------98------+ /----- Ciclev10026234m [Citrus clementina] (47)
| | | \-100+
| | | \----- orange1.1g043134m [Citrus sinensis] (60)
| | |
| /-63-+ \------------------------------- Eucgr.J03101.1.p [Eucalyptus grandis] (35)
| | |
| | | /----- Eucgr.F03951.1.p [Eucalyptus grandis] (13)
| /-100+ \--------------100-------------+
| | | \----- EcC047273.10 [Eucalyptus camaldulensis] (69)
| | |
| | \----------------------------------------- evm.model.supercontig_10.105 [Carica papaya] (62)
\-------66------+
| /---------- Neem_41267_f_1 [Azadirachta indica] (21)
| |
\----------------100----------------+ /----- Ciclev10010448m [Citrus clementina] (24)
\-100+
\----- orange1.1g044109m [Citrus sinensis] (67)
Root part of tree:
/------------------------------------------------------------------- Thecc1EG036928t1 [Theobroma cacao] (1)
|
| /----------------- Gorai.010G243700.1 [Gossypium raimondii] (5)
| /---------------100--------------+
| | \----------------- Gh_D13G1953 [Gossypium hirsutum] (25)
| |
|-------84-------+ /----------------- Cotton_A_19201_BGI-A2_v1.0 [Gossypium arboreum] (30)
| | /------100------+
| | | \----------------- Gh_A07G0253 [Gossypium hirsutum] (42)
+ \-------100------+
| | /----------------- Gh_D07G0310 [Gossypium hirsutum] (50)
| \------100------+
| \----------------- Gorai.001G036700.1 [Gossypium raimondii] (51)
|
| /-------------------------------------------------- (131)
| |
| | /----------------- Gh_A05G0472 [Gossypium hirsutum] (7)
\-------67-------+ /-------98------+
| | \----------------- Cotton_A_01186_BGI-A2_v1.0 [Gossypium arboreum] (59)
\-------100------+
| /----------------- Gorai.009G060900.1 [Gossypium raimondii] (18)
\-------80------+
\----------------- Gh_D05G0586 [Gossypium hirsutum] (23)
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