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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1916
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 120:
/---------- AT1G75710.1 [Arabidopsis thaliana] (2)
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/----100---+ /----- Araha.10772s0009.1.p [Arabidopsis halleri] (20)
| \-100+
| \----- 476719 [Arabidopsis lyrata] (73)
|
| /---------- Csa07g047180.1 [Camelina sativa] (19)
| |
| /-100+ /----- Csa16g039700.1 [Camelina sativa] (48)
/-100+ | \-99-+
| | | \----- Csa09g080340.1 [Camelina sativa] (77)
| |--72-+
| | | /----- Carubv10020159m [Capsella rubella] (37)
| | \---100---+
/------90------+ | \----- Cagra.0799s0042.1.p [Capsella grandiflora] (57)
| | |
| | \--------------------- Bostr.20129s0005.1.p [Boechera stricta] (32)
| |
| \-------------------------- KFK42002.1 [Arabis alpina] (55)
|
| /----- Rsa1.0_00434.1_g00014.1 [Raphanus sativus] (8)
| /---100---+
| | \----- RrC27228_p1 [Raphanus raphanistrum] (29)
| |
| /------100------+ /----- GSBRNA2T00067196001 [Brassica napus] (14)
| | | /-100+
| | | | \----- XP_009128127.1 [Brassica rapa] (69)
| | \-100+
/-100+ | | /----- XP_013616458.1 [Brassica oleracea] (43)
| | | \-100+
| | | \----- GSBRNA2T00077881001 [Brassica napus] (44)
| | |
| | | /----- Rsa1.0_00014.1_g00024.1 [Raphanus sativus] (12)
| | | /---100---+
| | /-51-+ | \----- RrC360_p5 [Raphanus raphanistrum] (76)
| | | | |
| | | | /-100-+ /----- XP_009106219.1 [Brassica rapa] (22)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00087561001 [Brassica napus] (31)
/-100-+ | | | | \-100+
| | | | | /-95-+ | /----- XP_013592738.1 [Brassica oleracea] (66)
| | \-65-+ | | | \-100+
| | | | | | \----- GSBRNA2T00103682001 [Brassica napus] (70)
| | | \-50-+ |
| | | | \--------------------- 676737216 [Sisymbrium irio] (53)
| | | |
/-100+ | | \-------------------------- Tp5g30820 [Thellungiella parvula] (79)
| | | |
| | | \------------------------------------ Thhalv10018514m [Eutrema salsugineum] (27)
| | |
| | \---------------------------------------------- AA31G00384 [Aethionema arabicum] (51)
| |
/-92-+ | /----- XP_010539850.1 [Tarenaya hassleriana] (5)
| | \----------------------100---------------------+
| | \----- XP_010533772.1 [Tarenaya hassleriana] (75)
| |
| | /----- EcC011684.10 [Eucalyptus camaldulensis] (3)
| \------------------------100------------------------+
| \----- Eucgr.F01643.1.p [Eucalyptus grandis] (23)
|
| /----- Cotton_A_26019_BGI-A2_v1.0 [Gossypium arboreum] (4)
| /-100+
| | \----- Gh_A01G0902 [Gossypium hirsutum] (62)
| /----100---+
| | | /----- Gorai.002G123600.1 [Gossypium raimondii] (34)
| | \-98-+
--98-+ | \----- Gh_D01G0942 [Gossypium hirsutum] (64)
| |
| | /----- Gh_D05G1782 [Gossypium hirsutum] (46)
| /-100+ /-100+
| | | | \----- Gorai.009G195000.1 [Gossypium raimondii] (49)
| | | /-100+
| | | | | /----- Gh_A05G1595 [Gossypium hirsutum] (54)
| | | | \-100+
| | \--90-+ \----- Cotton_A_16420_BGI-A2_v1.0 [Gossypium arboreum] (65)
| /-59-+ |
| | | \--------------- Thecc1EG034215t1 [Theobroma cacao] (80)
| | |
| | | /----- orange1.1g047748m [Citrus sinensis] (30)
| | | /-100+
\--------------100-------------+ | | \----- Ciclev10001255m [Citrus clementina] (67)
| \------100------+
| \---------- Neem_6527_f_3 [Azadirachta indica] (33)
|
\------------------------------- evm.model.supercontig_26.33 [Carica papaya] (28)
Subtree rooted at node 140:
/--------------------------------------------------------- (120)
|
| /----- Csa03g051550.1 [Camelina sativa] (7)
| /-100+
| | \----- Csa14g051750.1 [Camelina sativa] (68)
| /-100+
| | | /----- Carubv10009224m [Capsella rubella] (45)
| | \-100+
| /-100-+ \----- Cagra.1843s0002.1.p [Capsella grandiflora] (56)
| | |
| /------100-----+ \--------------- Bostr.15654s0049.1.p [Boechera stricta] (9)
| | |
| | \--------------------- 882294 [Arabidopsis lyrata] (35)
| |
| | /----- XP_013600340.1 [Brassica oleracea] (10)
| | /-100+
| | | \----- XP_009107404.1 [Brassica rapa] (40)
| | /-100+
| | | \---------- Rsa1.0_00536.1_g00008.1 [Raphanus sativus] (41)
/-100+ | /----55----+
| | /-100+ | \--------------- 676790246 [Sisymbrium irio] (72)
| | | | |
| | | | | /---------- XP_013592621.1 [Brassica oleracea] (11)
| | | | | |
| | | | | | /----- XP_009118945.1 [Brassica rapa] (13)
| | | | /-59-+ /-100+-100+
| | | | | | | | \----- GSBRNA2T00122908001 [Brassica napus] (24)
| | | | | | | |
| | /-93-+ | | | /-100-+ \---------- GSBRNA2T00013253001 [Brassica napus] (25)
| | | | | | | | |
| | | | \-100+ \-89-+ \--------------- Rsa1.0_00742.1_g00008.1 [Raphanus sativus] (59)
--100+ | | | | |
| | | | | \--------------------- Thhalv10011499m [Eutrema salsugineum] (74)
| | /-100-+ | |
| | | | | \------------------------------- Tp1g34830 [Thellungiella parvula] (18)
| | | | |
| | | | \----------------------------------------- KFK29074.1 [Arabis alpina] (47)
| \-100+ |
| | \---------------------------------------------- AA579G00001 [Aethionema arabicum] (42)
| |
| \---------------------------------------------------- XP_010533365.1 [Tarenaya hassleriana] (36)
|
\-------------------------------------------------------------- XP_010544461.1 [Tarenaya hassleriana] (71)
Root part of tree:
/------------------------------------------------------------------- Eucgr.F03752.1.p [Eucalyptus grandis] (1)
|
|------------------------------------------------------------------- EcS663236.10 [Eucalyptus camaldulensis] (61)
|
| /----------------------------------------------------------- (140)
| |
| | /--------------------------------- Thecc1EG035046t1 [Theobroma cacao] (6)
| | |
+ | | /----------------- Gh_D06G0380 [Gossypium hirsutum] (15)
| | | |
| | | | /-------- Gh_A06G0349 [Gossypium hirsutum] (26)
| | /---100--+ /--100--+---100--+
| | | | | | \-------- Cotton_A_18465_BGI-A2_v1.0 [Gossypium arboreum] (50)
| | | | | |
| | | | | \----------------- Gorai.010G048000.1 [Gossypium raimondii] (38)
\--100--+ | \---82--+
| | | /-------- Gh_D05G2208 [Gossypium hirsutum] (16)
| | | /---63---+
| | | | \-------- Gorai.009G243200.1 [Gossypium raimondii] (60)
| /---92--+ \--100--+
| | | | /-------- Cotton_A_16124_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | | \---91---+
| | | \-------- Gh_A05G2001 [Gossypium hirsutum] (39)
| | |
| | | /-------- Neem_3186_f_6 [Azadirachta indica] (17)
| | | /---100--+
\---97---+ | | \-------- Neem_20625_f_2 [Azadirachta indica] (78)
| \-----------100----------+
| | /-------- orange1.1g014111m [Citrus sinensis] (58)
| \---100--+
| \-------- Ciclev10001224m [Citrus clementina] (63)
|
\-------------------------------------------------- evm.model.supercontig_36.12 [Carica papaya] (52)
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