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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1917
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 132:
/----- Cotton_A_05312_BGI-A2_v1.0 [Gossypium arboreum] (3)
/-100+
| \----- Gh_A06G1990 [Gossypium hirsutum] (20)
/----100---+
| | /----- Gh_D06G2134 [Gossypium hirsutum] (49)
| \-100+
| \----- Gorai.010G240700.1 [Gossypium raimondii] (50)
|
/-87-+ /---------- Gh_D10G0318 [Gossypium hirsutum] (15)
| | |
| | /-66-+ /----- Gh_A10G0312 [Gossypium hirsutum] (21)
| | | \-74-+
/--------100--------+ \-100-+ \----- Cotton_A_34170_BGI-A2_v1.0 [Gossypium arboreum] (36)
| | |
| | \--------------- Gorai.011G036300.1 [Gossypium raimondii] (31)
| |
| \-------------------------- Thecc1EG029628t1 [Theobroma cacao] (37)
|
| /----- XP_013590172.1 [Brassica oleracea] (4)
| /-99-+
| | \----- GSBRNA2T00148012001 [Brassica napus] (25)
| /----100---+
| | | /----- XP_009106588.1 [Brassica rapa] (54)
| | \-100+
| | \----- GSBRNA2T00146419001 [Brassica napus] (74)
| |
| /-100+ /----- RrC6013_p2 [Raphanus raphanistrum] (18)
| | | /---100---+
| | | | \----- Rsa1.0_03168.1_g00005.1 [Raphanus sativus] (57)
| | | |
| | \-100-+ /----- GSBRNA2T00036557001 [Brassica napus] (23)
| | | /-89-+
| | | | \----- XP_009128310.1 [Brassica rapa] (69)
| | \-82-+
| | | /----- XP_013615912.1 [Brassica oleracea] (62)
| | \-100+
| | \----- GSBRNA2T00084311001 [Brassica napus] (64)
| |
| | /----- Araha.4300s0012.1.p [Arabidopsis halleri] (7)
| | /-63-+
| | | \----- 895772 [Arabidopsis lyrata] (45)
| | |
| | |---------- AT1G78700.1 [Arabidopsis thaliana] (16)
| | |
| | /-70-+ /----- RrC20339_p1 [Raphanus raphanistrum] (19)
| | | |-100+
| /-100+ | | \----- Rsa1.0_02929.1_g00001.1 [Raphanus sativus] (26)
| | | | |
| | | | | /----- Thhalv10018888m [Eutrema salsugineum] (58)
| | | | \-91-+
| | | | \----- KFK42252.1 [Arabis alpina] (67)
| | | |
| | | | /----- Cagra.1361s0016.1.p [Capsella grandiflora] (9)
| | |----51----+ /-100+
| | | | | \----- Carubv10020674m [Capsella rubella] (73)
| | | |-84-+
/--76-+ | | | | /----- Tp5g33760 [Thellungiella parvula] (44)
| | /-100+ | | \-100+
| | | | | | \----- Tp_un0074_007 [Thellungiella parvula] (79)
| | | | | |
| | | | | | /----- Csa07g057700.1 [Camelina sativa] (24)
| | | | | | |
| | | | | \----66---+----- Csa09g092790.1 [Camelina sativa] (59)
| | | | | |
| | /-100+ | | \----- Csa16g048250.1 [Camelina sativa] (70)
| | | | | |
| | | | | \-------------------------- Bostr.20129s0304.1.p [Boechera stricta] (68)
| | | | |
| | | | \------------------------------- AA31G00737 [Aethionema arabicum] (10)
| | | |
| | | \------------------------------------ XP_010537716.1 [Tarenaya hassleriana] (76)
| | |
| | | /----- orange1.1g020567m [Citrus sinensis] (6)
| | | /-100+
| | | | \----- Ciclev10021151m [Citrus clementina] (55)
| | | /-------99------+
| | | | \---------- Neem_15705_f_1 [Azadirachta indica] (43)
| | | |
| |-100+ | /----- Gh_A01G0360 [Gossypium hirsutum] (13)
| | | | /-54-+
/-61-+ | | | | \----- Cotton_A_14161_BGI-A2_v1.0 [Gossypium arboreum] (42)
| | | | | /-100+
| | | | | | | /----- Gh_D01G0390 [Gossypium hirsutum] (32)
| | | | | | \-64-+
| | | | /-93-+ | \----- Gorai.002G052400.1 [Gossypium raimondii] (75)
| | | | | | |
| | | | | | | /----- Gh_A11G2598 [Gossypium hirsutum] (30)
| | | | | | | /-95-+
| | | | | | /-100-+ | \----- Cotton_A_28046_BGI-A2_v1.0 [Gossypium arboreum] (81)
| | | | | | | |-100+
| | | | | | | | | /----- Gh_D11G2965 [Gossypium hirsutum] (65)
| | | \----98---+ | | | \-97-+
| | | | \-85-+ | \----- Gorai.007G327000.1 [Gossypium raimondii] (71)
| | | | | |
/-100+ | | | | \--------------- Thecc1EG031955t1 [Theobroma cacao] (61)
| | | | | |
| | | | | \--------------------- evm.model.supercontig_77.48 [Carica papaya] (53)
| | | | |
| | | | \------------------------------- Eucgr.F03236.1.p [Eucalyptus grandis] (40)
| | | |
| | | \---------------------------------------------- Eucgr.D00428.1.p [Eucalyptus grandis] (46)
| | |
--100+ | | /---------- Neem_10058_f_4 [Azadirachta indica] (11)
| | | |
| | \-------------------100-------------------+ /----- orange1.1g020318m [Citrus sinensis] (34)
| | \-100+
| | \----- Ciclev10015910m [Citrus clementina] (52)
| |
| \--------------------------------------------------------- evm.model.supercontig_3367.1 [Carica papaya] (33)
|
\-------------------------------------------------------------- XP_010518825.1 [Tarenaya hassleriana] (8)
Root part of tree:
/------------------------------------------------------------------- XP_009132289.1 [Brassica rapa] (1)
|
|------------------------------------------------------------------- GSBRNA2T00131390001 [Brassica napus] (35)
|
| /------- XP_013593572.1 [Brassica oleracea] (2)
| /-100-+
| | \------- GSBRNA2T00112602001 [Brassica napus] (47)
| |
| /--100-+------------- XP_009136969.1 [Brassica rapa] (60)
| | |
| | \------------- GSBRNA2T00106620001 [Brassica napus] (78)
| /------------89------------+
| | | /------- Rsa1.0_00119.1_g00020.1 [Raphanus sativus] (29)
| | \-----99-----+
| | \------- RrC2280_p1 [Raphanus raphanistrum] (80)
| |
| | /------- (132)
| | /-100-+
| | | \------- AA57G00162 [Aethionema arabicum] (63)
| | /------80-----+
| | | \------------- KFK28557.1 [Arabis alpina] (5)
| | |
+ | | /------- Carubv10005431m [Capsella rubella] (12)
| | | /-100-+
| | | | \------- Cagra.4306s0003.1.p [Capsella grandiflora] (14)
| | /--97-+ |
| | | | /--99--+ /------- Csa11g028550.1 [Camelina sativa] (27)
| /--100-+ | | | | |
| | | | | | \--95-+------- Csa12g042870.1 [Camelina sativa] (39)
| | | | | | |
| | | | | | \------- Csa10g025360.1 [Camelina sativa] (77)
| | | | \--75--+
| | | /--86--+ |-------------------- AT4G18890.1 [Arabidopsis thaliana] (17)
| | | | | |
| | | | | |-------------------- Bostr.30275s0366.1.p [Boechera stricta] (22)
| | | | | |
| /--99-+ |--85--+ | \-------------------- 492971 [Arabidopsis lyrata] (38)
| | | | | |
| | | | | \--------------------------------- Thhalv10025918m [Eutrema salsugineum] (48)
| | | | |
| | | | \---------------------------------------- 676792708 [Sisymbrium irio] (51)
| | | |
| | | \----------------------------------------------- Tp7g17600 [Thellungiella parvula] (56)
\--97--+ |
| | /------- Rsa1.0_05436.1_g00002.1 [Raphanus sativus] (28)
| \----------------------99----------------------+
| \------- RrC152_p8 [Raphanus raphanistrum] (72)
|
| /------- XP_013597106.1 [Brassica oleracea] (41)
\-------------------------100------------------------+
\------- GSBRNA2T00107743001 [Brassica napus] (66)
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