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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1926
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 106:
/----- Gh_A09G1285 [Gossypium hirsutum] (2)
/-100+
| \----- Cotton_A_13440_BGI-A2_v1.0 [Gossypium arboreum] (6)
/-100+
| | /----- Gorai.006G157300.2 [Gossypium raimondii] (20)
| \-100+
| \----- Gh_D09G1332 [Gossypium hirsutum] (23)
/-100-+
| | /----- Gorai.009G406500.1 [Gossypium raimondii] (21)
| | /-100+
| | | \----- Gh_D04G1000 [Gossypium hirsutum] (25)
/-90-+ \-93-+
| | \---------- Thecc1EG022490t2 [Theobroma cacao] (58)
| |
/-89-+ \--------------------- evm.model.supercontig_5.63 [Carica papaya] (4)
| |
| \-------------------------- Ciclev10011856m [Citrus clementina] (12)
/-----------100-----------+
| | /----- EcC038329.10 [Eucalyptus camaldulensis] (11)
| \-----------100-----------+
| \----- Eucgr.A01534.1.p [Eucalyptus grandis] (67)
|
| /----- GSBRNA2T00141814001 [Brassica napus] (9)
| /-100+
| | \----- XP_009133081.1 [Brassica rapa] (41)
| /-100+
| | | /----- XP_013626025.1 [Brassica oleracea] (27)
| | \-100+
| /---------100--------+ \----- GSBRNA2T00132470001 [Brassica napus] (66)
| | |
| | | /----- Rsa1.0_01481.1_g00006.1 [Raphanus sativus] (63)
| | \---100---+
| | \----- RrC1990_p3 [Raphanus raphanistrum] (64)
| |
| | /----- GSBRNA2T00077207001 [Brassica napus] (13)
| | /-100+
| | | \----- XP_013636924.1 [Brassica oleracea] (52)
| | /----100---+
| | | \---------- Rsa1.0_00498.1_g00012.1 [Raphanus sativus] (33)
| | |
| /-71-+ | /----- RrC226_p4 [Raphanus raphanistrum] (28)
| | | /-71-+ /---100---+
| | | | | | \----- Rsa1.0_00333.1_g00006.1 [Raphanus sativus] (43)
| | | | | |
/-100+ | | | \-100-+ /----- XP_013636224.1 [Brassica oleracea] (38)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00141134001 [Brassica napus] (47)
| | | | /-65-+ \-97-+
| | | | | | | /----- GSBRNA2T00117068001 [Brassica napus] (48)
| | | | | | \-100+
| | | | | | \----- XP_009143588.1 [Brassica rapa] (59)
| | | \-68-+ |
| | | | \-------------------------- 676787962 [Sisymbrium irio] (35)
| | | |
| | | | /----- Thhalv10016778m [Eutrema salsugineum] (46)
| | /-100+ \------------66-----------+
| | | | \----- Tp4g18690 [Thellungiella parvula] (61)
| | | |
| | | | /----- 482616 [Arabidopsis lyrata] (16)
| | | | /-99-+
| | | | | \----- Araha.9536s0003.1.p [Arabidopsis halleri] (50)
| | | | /----100---+
--97-+ | | | | \---------- AT2G36400.1 [Arabidopsis thaliana] (37)
| | | | |
| | | | | /----- Carubv10025172m [Capsella rubella] (22)
| | /-100-+ | /-100+ /-100+
| | | | | | | | \----- Cagra.0228s0030.1.p [Capsella grandiflora] (53)
| | | | | | | /-88-+
| | | | | | | | \---------- Csa06g039040.1 [Camelina sativa] (45)
| | | | \------88------+ \--88-+
| | | | | \--------------- Bostr.23794s0452.1.p [Boechera stricta] (60)
| \-91-+ | |
| | | \-------------------------- KFK36342.1 [Arabis alpina] (51)
| | |
| | \---------------------------------------------- AA60G00152 [Aethionema arabicum] (39)
| |
| | /----- XP_010553336.1 [Tarenaya hassleriana] (32)
| \----------------------100---------------------+
| \----- XP_010527780.1 [Tarenaya hassleriana] (62)
|
\-------------------------------------------------------------- KFK34537.1 [Arabis alpina] (65)
Root part of tree:
/------------------------------------------------------------------- RrC2275_p1 [Raphanus raphanistrum] (1)
|
|------------------------------------------------------------------- Rsa1.0_00144.1_g00006.1 [Raphanus sativus] (10)
|
| /------------------------------------- (106)
| |
| | /------- Carubv10017366m [Capsella rubella] (17)
| | /------100-----+
| | | \------- Cagra.0612s0011.1.p [Capsella grandiflora] (57)
| | |
| /--100--+ /--100--+ /------- Csa04g038830.1 [Camelina sativa] (19)
| | | | | /---61--+
| | | | | | \------- Csa06g027310.1 [Camelina sativa] (34)
| | | | \--100-+
| | | | \--------------- Csa09g061160.1 [Camelina sativa] (26)
| | \--100-+
| /--88--+ | /------- 323835 [Arabidopsis lyrata] (36)
| | | | /---76--+
| | | | | \------- Araha.24378s0005.1.p [Arabidopsis halleri] (44)
+ | | \------80------+
| | | \--------------- AT3G52910.1 [Arabidopsis thaliana] (40)
| | |
| | \--------------------------------------------- Thhalv10010453m [Eutrema salsugineum] (14)
| |
| | /------------------------------ Tp5g09420 [Thellungiella parvula] (3)
| | |
| | | /------- XP_009148749.1 [Brassica rapa] (7)
| | | /--100--+
| /--100--+----------59---------+ | \------- GSBRNA2T00126587001 [Brassica napus] (8)
| | | | /--100-+
| | | | | \--------------- XP_013634855.1 [Brassica oleracea] (49)
| | | \--100--+
| | | | /------- RrC8087_p3 [Raphanus raphanistrum] (31)
| | | \------100-----+
| | | \------- Rsa1.0_00368.1_g00001.1 [Raphanus sativus] (55)
| | |
| | | /--------------- GSBRNA2T00098678001 [Brassica napus] (24)
| | | |
\--100-+ | | /------- XP_013590378.1 [Brassica oleracea] (29)
| \-----------------100----------------+--100--+
| | \------- GSBRNA2T00071333001 [Brassica napus] (54)
| |
| \--------------- XP_009125239.1 [Brassica rapa] (42)
|
| /------- XP_009115989.1 [Brassica rapa] (5)
| /------100-----+
| | \------- GSBRNA2T00129429001 [Brassica napus] (56)
| |
\-----------------100-----------------+ /------- GSBRNA2T00109151001 [Brassica napus] (15)
| /---78--+
| | \------- XP_013600896.1 [Brassica oleracea] (18)
\--51--+
\--------------- XP_013603680.1 [Brassica oleracea] (30)
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