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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1927
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 117:
/---------- Gh_A05G2399 [Gossypium hirsutum] (2)
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| /----- Gorai.009G295000.1 [Gossypium raimondii] (7)
/-100+-100+
| | \----- Gh_D05G2664 [Gossypium hirsutum] (60)
| |
/--91-+ \---------- Cotton_A_04070_BGI-A2_v1.0 [Gossypium arboreum] (15)
| |
| | /----- Gorai.012G015900.1 [Gossypium raimondii] (28)
| \---100---+
| \----- Gh_D04G0127 [Gossypium hirsutum] (66)
|
| /----- Gh_A13G0040 [Gossypium hirsutum] (23)
/-99-+ /-100+
| | | \----- Cotton_A_15754_BGI-A2_v1.0 [Gossypium arboreum] (54)
| | |
| |----100---+---------- Gh_D13G0055 [Gossypium hirsutum] (52)
| | |
/-----------------57----------------+ | \---------- Gorai.013G005900.1 [Gossypium raimondii] (69)
| | |
| | \--------------------- Thecc1EG045438t1 [Theobroma cacao] (34)
| |
| | /----- orange1.1g027307m [Citrus sinensis] (13)
| \---------100--------+
| \----- Ciclev10032684m [Citrus clementina] (17)
|
| /----- XP_013634930.1 [Brassica oleracea] (4)
| /-99-+
| | \----- GSBRNA2T00113417001 [Brassica napus] (29)
| |
| /-97-+---------- GSBRNA2T00048529001 [Brassica napus] (45)
| | |
| | \---------- XP_009144310.1 [Brassica rapa] (71)
| /--97-+
| | | /----- RrC22610_p1 [Raphanus raphanistrum] (16)
| | \---100---+
| /-97-+ \----- Rsa1.0_17339.1_g00001.1 [Raphanus sativus] (26)
| | |
| | \--------------------- 676729134 [Sisymbrium irio] (79)
| |
| | /----- Rsa1.0_01254.1_g00010.1 [Raphanus sativus] (41)
| /-61-+ /-100+
| | | | \----- RrC21462_p1 [Raphanus raphanistrum] (65)
| | | /-100+
| | | | | /----- XP_009141058.1 [Brassica rapa] (59)
| | | | \-97-+
| | \----80----+ \----- XP_013634737.1 [Brassica oleracea] (61)
| | |
| | \--------------- Tp4g12900 [Thellungiella parvula] (75)
| |
| | /----- Carubv10024870m [Capsella rubella] (6)
| | /------100------+
| | | \----- Cagra.0567s0001.1.p [Capsella grandiflora] (31)
| | |
| | | /----- Csa07g012830.1 [Camelina sativa] (24)
| /-84-+ | /-100+
| | | /-66-+ | \----- Csa05g033380.1 [Camelina sativa] (32)
--66-+ | | | | /-99-+
| | | | | | \---------- Csa16g014550.1 [Camelina sativa] (63)
| | | | | |
| | |-80-+ \--53-+--------------- 481945 [Arabidopsis lyrata] (50)
| | | | |
| | | | \--------------- Bostr.24513s0205.1.p [Boechera stricta] (68)
| /-100+ | |
| | | | \-------------------------- AT2G30340.1 [Arabidopsis thaliana] (49)
| | | |
| | | |------------------------------- KFK24518.1 [Arabis alpina] (25)
| | | |
| /-82-+ | \------------------------------- Thhalv10017073m [Eutrema salsugineum] (58)
| | | |
| | | \------------------------------------ AA32G00667 [Aethionema arabicum] (8)
| /--65-+ |
| | | \----------------------------------------- XP_010558874.1 [Tarenaya hassleriana] (55)
| | |
| | \---------------------------------------------- evm.model.supercontig_2.327 [Carica papaya] (48)
| /-55-+
| | | /--------------- Thecc1EG042262t1 [Theobroma cacao] (11)
| | | |
| | | | /----- Gh_A03G0198 [Gossypium hirsutum] (12)
| | \-----------------100----------------+ /-92-+
| | | | \----- Cotton_A_04160_BGI-A2_v1.0 [Gossypium arboreum] (19)
| | | |
| | \-100+---------- Gorai.003G151800.1 [Gossypium raimondii] (36)
|-99-+ |
| | \---------- Gh_D03G1383 [Gossypium hirsutum] (80)
| |
| |--------------------------------------------------------- Eucgr.B04019.1.p [Eucalyptus grandis] (5)
| |
| | /---------- Neem_3828_f_1 [Azadirachta indica] (33)
| | |
| \----------------------65----------------------+ /----- Ciclev10002348m [Citrus clementina] (51)
| \-100+
| \----- orange1.1g028221m [Citrus sinensis] (56)
|
|-------------------------------------------------------------- Neem_2759_f_1 [Azadirachta indica] (38)
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\-------------------------------------------------------------- evm.model.supercontig_19.92 [Carica papaya] (57)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_17750.1_g00001.1 [Raphanus sativus] (1)
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|------------------------------------------------------------------- RrC15100_p1 [Raphanus raphanistrum] (42)
|
| /-------- (117)
| /---99---+
| | \-------- Eucgr.G03121.1.p [Eucalyptus grandis] (39)
| /---99--+
| | \----------------- XP_010554704.1 [Tarenaya hassleriana] (67)
| /-------99-------+
| | \------------------------- AA29G00228 [Aethionema arabicum] (77)
| |
| | /-------- XP_009133436.1 [Brassica rapa] (3)
| | /---100--+
| | | \-------- GSBRNA2T00124701001 [Brassica napus] (44)
| |-----------100----------+
| | | /-------- XP_013625779.1 [Brassica oleracea] (46)
| | \---99---+
| | \-------- GSBRNA2T00028687001 [Brassica napus] (73)
| |
| | /-------- Csa05g012280.1 [Camelina sativa] (9)
| | |
| | /---100--+-------- Csa06g044870.1 [Camelina sativa] (35)
| | | |
| | | \-------- Csa04g054820.1 [Camelina sativa] (81)
| | /---97--+
| | | | /-------- Cagra.1642s0010.1.p [Capsella grandiflora] (64)
+ | | \---99---+
| | /--100--+ \-------- Carubv10024002m [Capsella rubella] (74)
| | | |
| | | \------------------------- Bostr.23794s0013.1.p [Boechera stricta] (47)
| |---86---+
| /---99--+ | /-------- Araha.25137s0002.1.p [Arabidopsis halleri] (10)
| | | | |
| | | \-----------64-----------+-------- AT2G40470.1 [Arabidopsis thaliana] (62)
| | | |
| | | \-------- 483104 [Arabidopsis lyrata] (70)
| | |
| | | /--------------------------------- Tp4g22810 [Thellungiella parvula] (18)
| | | |
| | | | /-------- XP_013636312.1 [Brassica oleracea] (20)
| | |---73---+ /-------100------+
| | | | | \-------- GSBRNA2T00155110001 [Brassica napus] (76)
| | | | |
| /---100--+ | \--100--+ /-------- Rsa1.0_01200.1_g00011.1 [Raphanus sativus] (21)
| | | | | /---100--+
| | | | | | \-------- RrC4020_p2 [Raphanus raphanistrum] (22)
| | | | \--100--+
| | | | | /-------- GSBRNA2T00123296001 [Brassica napus] (40)
| | | | \---100--+
| | | | \-------- XP_009141907.1 [Brassica rapa] (78)
| | | |
| | | |------------------------------------------ Thhalv10017905m [Eutrema salsugineum] (37)
\--100--+ | |
| | \------------------------------------------ KFK36928.1 [Arabis alpina] (53)
| |
| \-------------------------------------------------- 676735646 [Sisymbrium irio] (27)
|
| /-------- XP_013632344.1 [Brassica oleracea] (14)
| /---98---+
| | \-------- GSBRNA2T00024342001 [Brassica napus] (43)
| |
\-------------------100-------------------+----------------- XP_009142693.1 [Brassica rapa] (30)
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\----------------- GSBRNA2T00068329001 [Brassica napus] (72)
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