![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1934
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 130:
/----- 343397 [Arabidopsis lyrata] (2)
/-100+
| \----- Araha.16726s0001.1.p [Arabidopsis halleri] (43)
/----100---+
| \---------- AT2G17770.2 [Arabidopsis thaliana] (31)
|
| /----- Cagra.3126s0010.1.p [Capsella grandiflora] (5)
/--------100--------+ /-100+
| | | \----- Carubv10015985m [Capsella rubella] (64)
| | /-82-+
| | | \---------- Bostr.18351s0244.1.p [Boechera stricta] (48)
| \-100-+
| | /----- Csa01g039910.1 [Camelina sativa] (19)
| \---100---+
| \----- Csa15g076190.1 [Camelina sativa] (46)
|
/-100+ /------------------------------------ Thhalv10023128m [Eutrema salsugineum] (6)
| | |
| | | /----- GSBRNA2T00026595001 [Brassica napus] (9)
| | | /-100+
| | | | \----- XP_009121081.1 [Brassica rapa] (23)
| | | /-100+
| | | | \---------- XP_013596199.1 [Brassica oleracea] (33)
| | | /-100-+
| \-100+ | \--------------- RrC4552_p1 [Raphanus raphanistrum] (41)
| | /----88---+
| | | \--------------------- Tp3g31180 [Thellungiella parvula] (40)
| | |
| | | /--------------- XP_013606641.1 [Brassica oleracea] (15)
| | | |
| | | | /----- XP_009112448.1 [Brassica rapa] (25)
| \-64-+ /-100-+ /-85-+
| | | | | \----- GSBRNA2T00035784001 [Brassica napus] (30)
| | | \-100+
| | /-99-+ \---------- GSBRNA2T00045030001 [Brassica napus] (50)
| | | |
| \-100+ \--------------------- Rsa1.0_14440.1_g00002.1 [Raphanus sativus] (47)
| |
| \-------------------------- 676748950 [Sisymbrium irio] (26)
|
| /----- orange1.1g027627m [Citrus sinensis] (3)
| /---------100--------+
| | \----- Ciclev10003845m [Citrus clementina] (36)
| |
| | /--------------- Thecc1EG034270t1 [Theobroma cacao] (12)
| | |
| | /--82-+ /---------- Gh_A01G0888 [Gossypium hirsutum] (18)
| | | | |
| | | \-100+ /----- Gh_D01G0926 [Gossypium hirsutum] (29)
| | | \-73-+
| | | \----- Gorai.002G122200.1 [Gossypium raimondii] (42)
| | |
/--82-+ | | /----- Gorai.009G192500.1 [Gossypium raimondii] (24)
| | |-64-+ /-100+
| | /-54-+ | | \----- Gh_D05G1758 [Gossypium hirsutum] (71)
| | | | |----100---+
| | | | | | /----- Cotton_A_16446_BGI-A2_v1.0 [Gossypium arboreum] (38)
| | | | | \-96-+
| | | | | \----- Gh_A05G1580 [Gossypium hirsutum] (49)
| | | | |
| | | | \--------------------- Gh_D05G2434 [Gossypium hirsutum] (28)
| | | |
| | | |-------------------------- Eucgr.F01674.1.p [Eucalyptus grandis] (22)
| | | |
| | | |-------------------------- EcC046185.90 [Eucalyptus camaldulensis] (27)
| | | |
| |------56------+ \-------------------------- Neem_36731_f_1 [Azadirachta indica] (54)
| | |
| | | /----- Gh_A11G1590 [Gossypium hirsutum] (7)
| | | /-76-+
| | | | \----- Cotton_A_22172_BGI-A2_v1.0 [Gossypium arboreum] (60)
/-82-+ | | /-100+
| | | | | | /----- Gh_D11G1748 [Gossypium hirsutum] (52)
| | | | | \-100+
| | | | /--57-+ \----- Gorai.007G191800.1 [Gossypium raimondii] (59)
| | | | | |
| | | | | \--------------- Thecc1EG000152t1 [Theobroma cacao] (53)
| | | | |
| | | \---100---+ /----- Gh_A02G1659 [Gossypium hirsutum] (32)
| | | | /-96-+
| | | | | \----- Cotton_A_01537_BGI-A2_v1.0 [Gossypium arboreum] (51)
| | | \----100---+
| | | | /----- Gorai.003G007000.1 [Gossypium raimondii] (37)
| | | \-96-+
| | | \----- Gh_D03G0063 [Gossypium hirsutum] (56)
| | |
| | | /----- XP_010531110.1 [Tarenaya hassleriana] (4)
| | \-------------------89-------------------+
| | \----- XP_010548259.1 [Tarenaya hassleriana] (17)
| |
| \---------------------------------------------------- AA30G00112 [Aethionema arabicum] (11)
|
| /----- XP_013624815.1 [Brassica oleracea] (8)
| /-100+
| | \----- GSBRNA2T00035884001 [Brassica napus] (35)
| /-100+
| | \---------- XP_009109260.1 [Brassica rapa] (45)
| /-100-+
/-100+ | | /----- RrC257_p2 [Raphanus raphanistrum] (44)
| | | \---100---+
| | | \----- Rsa1.0_00451.1_g00016.1 [Raphanus sativus] (69)
| | /-82-+
| | | | /----- XP_009138393.1 [Brassica rapa] (10)
| | | | /-100+
| | | | | \----- GSBRNA2T00086647001 [Brassica napus] (39)
| | | \----100---+
| | | | /----- GSBRNA2T00100101001 [Brassica napus] (20)
| | | \-100+
| | | \----- XP_013596590.1 [Brassica oleracea] (72)
| | |
| | | /----- RrC1103_p3 [Raphanus raphanistrum] (13)
| | /-62-+ /----94---+
| | | | | \----- Rsa1.0_02039.1_g00005.1 [Raphanus sativus] (70)
| | | | |
| | | |----83----+ /----- GSBRNA2T00130974001 [Brassica napus] (21)
--52-+ | | | | /-100+
| | | | | | \----- XP_013588616.1 [Brassica oleracea] (63)
| |------------64-----------+ | \-89-+
| | | | \---------- XP_009148866.1 [Brassica rapa] (62)
| | | |
| | | \-------------------------- Tp7g33680 [Thellungiella parvula] (57)
| | |
| | \------------------------------- Thhalv10025822m [Eutrema salsugineum] (68)
| |
| \--------------------------------------------------------- KFK30225.1 [Arabis alpina] (14)
|
| /----- Csa11g005740.1 [Camelina sativa] (34)
| /-77-+
| | \----- Csa10g006150.1 [Camelina sativa] (67)
| /-100+
| | \---------- Csa12g007500.1 [Camelina sativa] (61)
\----------------------69----------------------+
\--------------- Bostr.7867s1454.1.p [Boechera stricta] (65)
Root part of tree:
/------------------------------------------------------------------- Carubv10006580m [Capsella rubella] (1)
|
|------------------------------------------------------------------- Cagra.2236s0021.1.p [Capsella grandiflora] (66)
+
| /-------------------------------------------------- (130)
| |
\-------100------+ /--------------------------------- AT4G35900.1 [Arabidopsis thaliana] (16)
| |
\-------100------+ /----------------- Araha.45412s0002.1.p [Arabidopsis halleri] (55)
\-------97------+
\----------------- 856954 [Arabidopsis lyrata] (58)
|




