PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM1952
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 131:

                                                                    /----- XP_013583788.1 [Brassica oleracea]                      (2)
                                                               /-57-+                 
                                                               |    \----- GSBRNA2T00008967001 [Brassica napus]                    (74)
                                                          /-58-+                      
                                                          |    |    /----- XP_013615044.1 [Brassica oleracea]                      (42)
                                                          |    \-100+                 
                                                          |         \----- XP_013639182.1 [Brassica oleracea]                      (68)
                                                    /--99-+                           
                                                    |     |--------------- XP_009148559.1 [Brassica rapa]                          (5)
                                                    |     |                           
                                               /-100+     \--------------- GSBRNA2T00105401001 [Brassica napus]                    (27)
                                               |    |                                 
                                               |    |               /----- Rsa1.0_00419.1_g00002.1 [Raphanus sativus]              (18)
                                          /-50-+    \------100------+                 
                                          |    |                    \----- RrC1987_p2 [Raphanus raphanistrum]                      (48)
                                          |    |                                      
                                          |    \-------------------------- 676755560 [Sisymbrium irio]                             (15)
                                     /-100+                                           
                                     |    |         /--------------------- Tp1g11440 [Thellungiella parvula]                       (3)
                                     |    |         |                                 
                                     |    |         |               /----- RrC2403_p2 [Raphanus raphanistrum]                      (4)
                                     |    \---100---+     /---100---+                 
                                     |              |     |         \----- Rsa1.0_00020.1_g00015.1 [Raphanus sativus]              (60)
                                     |              |     |                           
                                     |              \-100-+         /----- GSBRNA2T00015245001 [Brassica napus]                    (8)
                                /-100+                    |    /-100+                 
                                |    |                    |    |    \----- XP_009110613.1 [Brassica rapa]                          (71)
                                |    |                    \-100+                      
                                |    |                         |    /----- XP_013604461.1 [Brassica oleracea]                      (38)
                                |    |                         \-100+                 
                                |    |                              \----- GSBRNA2T00057047001 [Brassica napus]                    (40)
                                |    |                                                
                                |    \------------------------------------ Thhalv10007566m [Eutrema salsugineum]                   (81)
                /------100------+                                                     
                |               |                                   /----- Araha.52989s0002.1.p [Arabidopsis halleri]              (10)
                |               |                              /-91-+                 
                |               |                              |    \----- 879559 [Arabidopsis lyrata]                             (11)
                |               |                         /-99-+                      
                |               |                         |    \---------- AT1G12860.1 [Arabidopsis thaliana]                      (52)
                |               |                   /--86-+                           
                |               |                   |     \--------------- Bostr.13671s0164.1.p [Boechera stricta]                 (19)
                |               \--------100--------+                                 
                |                                   |               /----- Cagra.0568s0207.1.p [Capsella grandiflora]              (31)
                |                                   \------100------+                 
                |                                                   \----- Carubv10009081m [Capsella rubella]                      (58)
                |                                                                     
                |                                                   /----- GSBRNA2T00040443001 [Brassica napus]                    (16)
                |                                              /-100+                 
                |                                              |    \----- XP_013613372.1 [Brassica oleracea]                      (35)
                |                                         /-100+                      
                |                                         |    |    /----- XP_009129484.1 [Brassica rapa]                          (43)
                |                                         |    \-100+                 
                |                                         |         \----- GSBRNA2T00092171001 [Brassica napus]                    (57)
                |                                   /-100-+                           
                |                                   |     |         /----- XP_009152022.1 [Brassica rapa]                          (17)
                |                                   |     |    /-100+                 
                |                                   |     |    |    \----- XP_013597306.1 [Brassica oleracea]                      (73)
                |                                   |     \-99-+                      
                |                              /-89-+          |    /----- Rsa1.0_01883.1_g00003.1 [Raphanus sativus]              (49)
                |                              |    |          \-100+                 
                |                              |    |               \----- RrC1984_p3 [Raphanus raphanistrum]                      (67)
                |                         /-81-+    |                                 
                |                         |    |    \--------------------- Tp2g15870 [Thellungiella parvula]                       (56)
           /-95-+                         |    |                                      
           |    |                         |    \-------------------------- 676759750 [Sisymbrium irio]                             (61)
           |    |                    /-66-+                                           
           |    |                    |    |                         /----- XP_013606376.1 [Brassica oleracea]                      (22)
           |    |                    |    |                    /-100+                 
           |    |                    |    |                    |    \----- XP_009121430.1 [Brassica rapa]                          (23)
           |    |                    |    \---------100--------+                      
           |    |               /-99-+                         |    /----- RrC2891_p2 [Raphanus raphanistrum]                      (26)
           |    |               |    |                         \-100+                 
           |    |               |    |                              \----- Rsa1.0_00694.1_g00012.1 [Raphanus sativus]              (64)
           |    |               |    |                                                
           |    |               |    \------------------------------------ Thhalv10004059m [Eutrema salsugineum]                   (24)
           |    |               |                                                     
           |    |               |                                   /----- Csa06g006530.1 [Camelina sativa]                        (28)
           |    |               |                              /-95-+                 
           |    |               |                              |    \----- Csa09g011380.1 [Camelina sativa]                        (39)
           |    |          /-100+                         /-100+                      
           |    |          |    |                         |    \---------- Csa04g012360.1 [Camelina sativa]                        (34)
           |    |          |    |                   /-100-+                           
      --100+    |          |    |                   |     |         /----- Cagra.23157s0001.1.p [Capsella grandiflora]             (36)
           |    |          |    |                   |     \----56---+                 
           |    |          |    |              /-95-+               \----- Carubv10017096m [Capsella rubella]                      (54)
           |    |          |    |              |    |                                 
           |    |          |    |              |    \--------------------- Bostr.0556s0344.1.p [Boechera stricta]                  (47)
           |    |    /--86-+    \------100-----+                                      
           |    |    |     |                   |               /---------- AT3G26744.1 [Arabidopsis thaliana]                      (62)
           |    |    |     |                   |               |                      
           |    |    |     |                   \------100------+    /----- 484449 [Arabidopsis lyrata]                             (72)
           |    |    |     |                                   \-100+                 
           |    |    |     |                                        \----- Araha.13387s0004.1.p [Arabidopsis halleri]              (82)
           |    \-100+     |                                                          
           |         |     |                                        /----- RrC5306_p2 [Raphanus raphanistrum]                      (41)
           |         |     \-------------------100------------------+                 
           |         |                                              \----- Rsa1.0_04413.1_g00003.1 [Raphanus sativus]              (44)
           |         |                                                                
           |         \---------------------------------------------------- AA53G00886 [Aethionema arabicum]                        (32)
           |                                                                          
           |                                                        /----- XP_010528979.1 [Tarenaya hassleriana]                   (33)
           \---------------------------100--------------------------+                 
                                                                    \----- XP_010554134.1 [Tarenaya hassleriana]                   (63)
                                                                                      
      Subtree rooted at node 156:

                                                                    /----- (131)
                     /----------------------100---------------------+                 
                     |                                              \----- evm.model.supercontig_70.77 [Carica papaya]             (51)
                     |                                                                
                     |                                              /----- orange1.1g047004m [Citrus sinensis]                     (9)
                     |                                         /-100+                 
                     |                                         |    \----- Ciclev10033497m [Citrus clementina]                     (30)
                     |               /-----------100-----------+                      
                     |               |                         |    /----- Neem_35293_f_2 [Azadirachta indica]                     (14)
                     |               |                         \-100+                 
                     |               |                              \----- Neem_11185_f_2 [Azadirachta indica]                     (69)
                     |               |                                                
                     |               |                              /----- Gh_A11G0357 [Gossypium hirsutum]                        (12)
                     |               |                         /-57-+                 
                     |               |                         |    \----- Cotton_A_01954_BGI-A2_v1.0 [Gossypium arboreum]         (55)
                     |               |                    /-100+                      
                     |               |                    |    |    /----- Gh_D11G0415 [Gossypium hirsutum]                        (66)
                     |               |                    |    \-100+                 
                /-100+               |                    |         \----- Gorai.007G044800.1 [Gossypium raimondii]                (80)
                |    |          /-100+              /--99-+                           
                |    |          |    |              |     |         /----- Gorai.003G116300.1 [Gossypium raimondii]                (46)
                |    |          |    |              |     |    /-95-+                 
                |    |          |    |              |     |    |    \----- Gh_D03G1047 [Gossypium hirsutum]                        (78)
                |    |          |    |              |     \-100+                      
                |    |          |    |         /-100+          |    /----- Gh_A03G0490 [Gossypium hirsutum]                        (70)
                |    |          |    |         |    |          \-100+                 
                |    |          |    |         |    |               \----- Cotton_A_28479_BGI-A2_v1.0 [Gossypium arboreum]         (76)
                |    |     /-99-+    |    /-100+    |                                 
                |    |     |    |    |    |    |    \--------------------- Thecc1EG014741t1 [Theobroma cacao]                      (29)
                |    |     |    |    |    |    |                                      
                |    |     |    |    \-91-+    \-------------------------- XP_010536585.1 [Tarenaya hassleriana]                   (59)
           /-95-+    |     |    |         |                                           
           |    |    |     |    |         \------------------------------- evm.model.supercontig_1024.1 [Carica papaya]            (45)
           |    |    |     |    |                                                     
           |    |    \-100-+    |                                   /----- Eucgr.G01938.1.p [Eucalyptus grandis]                   (20)
           |    |          |    \----------------100----------------+                 
           |    |          |                                        \----- EcC052705.10 [Eucalyptus camaldulensis]                 (79)
           |    |          |                                                          
           |    |          |                                   /---------- Neem_8767_f_1 [Azadirachta indica]                      (25)
           |    |          |                                   |                      
           |    |          \----------------100----------------+    /----- Ciclev10015052m [Citrus clementina]                     (53)
      --100+    |                                              \-100+                 
           |    |                                                   \----- orange1.1g011370m [Citrus sinensis]                     (75)
           |    |                                                                     
           |    \--------------------------------------------------------- Thecc1EG017336t1 [Theobroma cacao]                      (7)
           |                                                                          
           |                                                        /----- Gh_A11G0588 [Gossypium hirsutum]                        (6)
           |                                                   /-100+                 
           |                                                   |    \----- Cotton_A_09442_BGI-A2_v1.0 [Gossypium arboreum]         (21)
           |                                                   |                      
           \------------------------100------------------------+---------- Gorai.007G072600.1 [Gossypium raimondii]                (13)
                                                               |                      
                                                               \---------- Gh_D11G0675 [Gossypium hirsutum]                        (65)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Cotton_A_22712_BGI-A2_v1.0 [Gossypium arboreum]         (1)
      |                                                                               
      |------------------------------------------------------------------- Gh_A07G2140 [Gossypium hirsutum]                        (77)
      +                                                                               
      |                     /--------------------------------------------- (156)
      |                     |                                                         
      \---------100---------+                      /---------------------- Gorai.001G275600.1 [Gossypium raimondii]                (37)
                            \----------97----------+                                  
                                                   \---------------------- Gh_D07G2352 [Gossypium hirsutum]                        (50)