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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1981
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 148:
/----- Cotton_A_01262_BGI-A2_v1.0 [Gossypium arboreum] (2)
/----97---+
| \----- Cotton_A_17716_BGI-A2_v1.0 [Gossypium arboreum] (4)
|
/--97-+ /----- Gh_A05G0407 [Gossypium hirsutum] (23)
| | /-85-+
| | | \----- Cotton_A_01261_BGI-A2_v1.0 [Gossypium arboreum] (34)
| \-94-+
| | /----- Gh_D05G0524 [Gossypium hirsutum] (54)
| \-100+
| \----- Gorai.009G054200.1 [Gossypium raimondii] (79)
|
/-100+ /----- Gorai.004G291100.1 [Gossypium raimondii] (9)
| | /-100+
| | | \----- Gh_D08G2618 [Gossypium hirsutum] (76)
| | /-100+
| | | | /----- Cotton_A_11915_BGI-A2_v1.0 [Gossypium arboreum] (37)
| | | \-100+
| | | \----- Gh_A08G2252 [Gossypium hirsutum] (39)
| \--63-+
/-100+ | /----- Gh_A07G0197 [Gossypium hirsutum] (21)
| | | /-94-+
| | | | \----- Cotton_A_07235_BGI-A2_v1.0 [Gossypium arboreum] (56)
| | \-100+
| | | /----- Gorai.001G030600.1 [Gossypium raimondii] (32)
| | \-100+
| | \----- Gh_D07G0251 [Gossypium hirsutum] (52)
| |
| \-------------------------- Thecc1EG037098t1 [Theobroma cacao] (55)
|
/-100+ /----- Ciclev10007648m [Citrus clementina] (6)
| | /-100+
| | | \----- orange1.1g005719m [Citrus sinensis] (36)
| | /-100+
| | | | /----- Ciclev10033605m [Citrus clementina] (67)
| | | \-100+
| | /-100-+ \----- orange1.1g009670m [Citrus sinensis] (75)
| | | |
/-100+ | | | /----- Neem_504_f_6 [Azadirachta indica] (25)
| | \---100---+ \---100---+
| | | \----- Neem_21128_f_1 [Azadirachta indica] (26)
| | |
| | \--------------------- evm.model.supercontig_46.117 [Carica papaya] (48)
| |
| | /----- Eucgr.C00380.1.p [Eucalyptus grandis] (11)
| \--------------100-------------+
| \----- EcC023480.80 [Eucalyptus camaldulensis] (20)
|
| /----- Gh_D13G1951 [Gossypium hirsutum] (5)
| /-100+
| | \----- Gorai.010G243900.1 [Gossypium raimondii] (24)
| /----100---+
| | | /----- Cotton_A_09096_BGI-A2_v1.0 [Gossypium arboreum] (10)
/-100+ | \-100+
| | | \----- Gh_A13G1590 [Gossypium hirsutum] (43)
| | |
| | | /----- Cotton_A_01185_BGI-A2_v1.0 [Gossypium arboreum] (15)
| | /-100+ /-100+
| | | | | \----- Gh_A05G0473 [Gossypium hirsutum] (30)
| | | | /-100+
| | | | | | /----- Gorai.009G061000.1 [Gossypium raimondii] (41)
| | | | | \-89-+
| | | \--93-+ \----- Gh_D05G0587 [Gossypium hirsutum] (64)
| | /-73-+ |
/-100-+ | | | \--------------- Thecc1EG036926t1 [Theobroma cacao] (53)
| | | | |
| | | | | /----- Ciclev10007639m [Citrus clementina] (19)
| | | | | /-100+
| | \----91---+ | | \----- orange1.1g005465m [Citrus sinensis] (28)
| | | \------100------+
| | | \---------- Neem_6585_f_3 [Azadirachta indica] (46)
| | |
| | \------------------------------- evm.model.supercontig_127.10 [Carica papaya] (17)
| |
| \---------------------------------------------- XP_010525933.1 [Tarenaya hassleriana] (40)
|
| /----- Csa16g046790.1 [Camelina sativa] (12)
| /-99-+
| | \----- Csa09g090370.1 [Camelina sativa] (18)
| /-100+
| | \---------- Csa07g055200.1 [Camelina sativa] (68)
| /--94-+
| | | /----- Carubv10022837m [Capsella rubella] (47)
| | \---100---+
| /-100+ \----- Cagra.2381s0022.1.p [Capsella grandiflora] (72)
/-100+ | |
| | /-53-+ \--------------------- Bostr.26326s0153.1.p [Boechera stricta] (29)
| | | |
| | | \-------------------------- AT2G25180.1 [Arabidopsis thaliana] (74)
| | /-100+
| | | | /----- 481375 [Arabidopsis lyrata] (62)
| | | \-----------100-----------+
| | | \----- Araha.0387s0003.1.p [Arabidopsis halleri] (71)
| | |
| | | /----- 676791942 [Sisymbrium irio] (13)
| | | /-------93------+
| | | | \----- Tp4g04160 [Thellungiella parvula] (60)
| | /-100+ |
| | | | | /----- XP_013631146.1 [Brassica oleracea] (22)
| | | | | /-100+
/-100+ | | | /-100+ | \----- GSBRNA2T00096513001 [Brassica napus] (57)
| | | | | | | /-100+
| | | | | | | | | /----- XP_009140627.1 [Brassica rapa] (44)
| | | | | | | | \-100+
| | | | | | \-100-+ \----- GSBRNA2T00058348001 [Brassica napus] (73)
| | \----100---+ \----65---+ |
| | | | | /----- RrC9448_p1 [Raphanus raphanistrum] (51)
| | | | \---100---+
| | | | \----- Rsa1.0_02367.1_g00004.1 [Raphanus sativus] (77)
| | | |
| | | \-------------------------- Thhalv10000098m [Eutrema salsugineum] (33)
| | |
| | \----------------------------------------- AA249G00001 [Aethionema arabicum] (35)
| |
| \--------------------------------------------------------- KFK35034.1 [Arabis alpina] (14)
|
| /----- GSBRNA2T00077765001 [Brassica napus] (3)
| /-100+
--100+ | \----- XP_009138054.1 [Brassica rapa] (49)
| /-100+
| | | /----- XP_013599414.1 [Brassica oleracea] (8)
| | \-100+
| /-100-+ \----- GSBRNA2T00099828001 [Brassica napus] (69)
| | |
| | | /----- Rsa1.0_00092.1_g00036.1 [Raphanus sativus] (45)
| | \---100---+
| | \----- RrC3240_p3 [Raphanus raphanistrum] (66)
| /-100+
| | | /----- XP_013621510.1 [Brassica oleracea] (16)
| | | /-100+
| | | | \----- GSBRNA2T00130521001 [Brassica napus] (27)
| /-100+ \----100---+
| | | \---------- RrC19440_p1 [Raphanus raphanistrum] (70)
| | |
| /-98-+ \-------------------------- Tp7g29740 [Thellungiella parvula] (59)
| | |
\-----------100-----------+ \------------------------------- 676740606 [Sisymbrium irio] (65)
|
\------------------------------------ Thhalv10024866m [Eutrema salsugineum] (63)
Root part of tree:
/------------------------------------------------------------------- AT4G31920.1 [Arabidopsis thaliana] (1)
|
| /----------- 857408 [Arabidopsis lyrata] (7)
|--------------------------100--------------------------+
| \----------- Araha.3172s0002.1.p [Arabidopsis halleri] (78)
|
+ /-------------------------------------------------------- (148)
| |
| | /----------- Cagra.3807s0064.1.p [Capsella grandiflora] (31)
| | /---------100---------+
| | | \----------- Carubv10004554m [Capsella rubella] (38)
\----97----+ |
| /----100----+ /----------- Csa10g010570.1 [Camelina sativa] (42)
| | | /----100---+
| | | | \----------- Csa12g014090.1 [Camelina sativa] (61)
\----100---+ \----100---+
| \---------------------- Csa11g011390.1 [Camelina sativa] (58)
|
\--------------------------------------------- Bostr.7867s1047.1.p [Boechera stricta] (50)
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