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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1982
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 122:
/----- 340623 [Arabidopsis lyrata] (2)
/-97-+
| \----- Bostr.25375s0002.1.p [Boechera stricta] (30)
/-100+
| \---------- 352687 [Arabidopsis lyrata] (53)
|
/--------------99--------------+ /----- 912076 [Arabidopsis lyrata] (17)
| | /-100+
| | | \----- Araha.1146s0009.1.p [Arabidopsis halleri] (54)
| \-100+
| | /----- AT4G01520.1 [Arabidopsis thaliana] (19)
| \-100+
| \----- AT4G01540.1 [Arabidopsis thaliana] (23)
|
| /--------------------- Rsa1.0_04448.1_g00002.1 [Raphanus sativus] (3)
| |
| | /----- XP_013607450.1 [Brassica oleracea] (6)
| | /-99-+
| /-98-+ | \----- GSBRNA2T00123489001 [Brassica napus] (39)
| | | /-100+
| | | | | /----- GSBRNA2T00027754001 [Brassica napus] (20)
| | | | \-100+
| | \-100-+ \----- XP_009111358.1 [Brassica rapa] (67)
| /---100---+ |
| | | | /----- Rsa1.0_04448.1_g00004.1 [Raphanus sativus] (28)
| | | \---100---+
| | | \----- RrC12484_p1 [Raphanus raphanistrum] (66)
| | |
| | \-------------------------- 676743522 [Sisymbrium irio] (35)
| |
/--90-+ | /----- EcS504776.10 [Eucalyptus camaldulensis] (4)
| | | /-100+
| | | | \----- EcS722800.10 [Eucalyptus camaldulensis] (65)
| | | /-95-+
| | | | | /----- EcC034730.10 [Eucalyptus camaldulensis] (13)
| | | | \-100+
| | | | \----- EcC010793.10 [Eucalyptus camaldulensis] (45)
| | /-88-+ /--63-+
| | | | | |--------------- 357630 [Arabidopsis lyrata] (29)
| | | | | |
| | | | | | /----- EcC019123.10 [Eucalyptus camaldulensis] (49)
| | | | /-63-+ \---100---+
| | | | | | \----- EcS658905.10 [Eucalyptus camaldulensis] (70)
| | | | | |
| | | | | | /----- XP_010522873.1 [Tarenaya hassleriana] (38)
| | | | /-80-+ \------100------+
| | | | | | \----- XP_010556656.1 [Tarenaya hassleriana] (56)
| | | | | |
| | | | | \-------------------------- XP_010522874.1 [Tarenaya hassleriana] (9)
| | | | |
| | | \-55-+ /----- XP_009113875.1 [Brassica rapa] (16)
| | | |-----------100-----------+
| | | | \----- XP_013609014.1 [Brassica oleracea] (69)
| \-89-+ |
| | \------------------------------- AA32G00197 [Aethionema arabicum] (34)
| |
| | /--------------- Csa02g004650.1 [Camelina sativa] (7)
| | |
| | | /----- Bostr.4825s0021.1.p [Boechera stricta] (42)
| | /---------100--------+ /-99-+
/-84-+ | | | | \----- Bostr.10064s0010.1.p [Boechera stricta] (44)
| | | | \-100+
| | | | \---------- Bostr.4825s0024.1.p [Boechera stricta] (62)
| | | |
| | | | /--------------- Csa02g011430.1 [Camelina sativa] (10)
| | | | |
| | | | | /----- Csa02g004670.1 [Camelina sativa] (51)
| | | | /-100-+ /-100+
| | \-100+ | | | \----- Csa13g055730.1 [Camelina sativa] (57)
| | | | \-100+
| | | /-100+ \---------- Csa08g052950.1 [Camelina sativa] (64)
| | | | |
| | | | | /----- Carubv10003260m [Capsella rubella] (18)
| | | /-100+ \------100------+
| | | | | \----- Cagra.0334s0001.1.p [Capsella grandiflora] (58)
| | | | |
| | | | \-------------------------- Bostr.4825s0023.1.p [Boechera stricta] (60)
| | \-100+
| | | /----- 327634 [Arabidopsis lyrata] (27)
| | | /-98-+
| | | | \----- AT4G01550.1 [Arabidopsis thaliana] (41)
/-100+ | \---------100--------+
| | | \---------- Araha.1146s0008.1.p [Arabidopsis halleri] (68)
| | |
| | | /----- KFK30696.1 [Arabis alpina] (5)
| | | /-100+
| | | | \----- KFK30695.1 [Arabis alpina] (25)
| | | /-100+
| | | | \---------- Thhalv10028684m [Eutrema salsugineum] (52)
| | \-----------------76-----------------+
| | \--------------- Tp6g01460 [Thellungiella parvula] (15)
| |
| | /----- GSBRNA2T00104269001 [Brassica napus] (14)
| | /-100+
--100+ | | \----- XP_009128520.1 [Brassica rapa] (33)
| | /-100+
| | | | /----- GSBRNA2T00113154001 [Brassica napus] (21)
| | | \-100+
| | /-100-+ \----- XP_013614047.1 [Brassica oleracea] (46)
| | | |
| | | | /----- RrC6871_p1 [Raphanus raphanistrum] (26)
| \-----------------79----------------+ \---100---+
| | \----- Rsa1.0_00513.1_g00009.1 [Raphanus sativus] (48)
| |
| \--------------------- 676743518 [Sisymbrium irio] (63)
|
| /----- 676743516 [Sisymbrium irio] (11)
\---------------------------96---------------------------+
\----- 676743514 [Sisymbrium irio] (59)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_02660.1_g00002.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------- RrC3978_p2 [Raphanus raphanistrum] (36)
|
| /---------------------- (122)
| |
| /----100---+ /----------- XP_013589746.1 [Brassica oleracea] (24)
| | \----100---+
| | \----------- XP_013606555.1 [Brassica oleracea] (40)
| |
| | /----------- XP_013605970.1 [Brassica oleracea] (8)
| | /----100---+
| | | \----------- GSBRNA2T00123485001 [Brassica napus] (55)
+ /-----68----+----100---+
| | | | /----------- GSBRNA2T00027751001 [Brassica napus] (12)
| | | \----100---+
| | | \----------- XP_009111357.1 [Brassica rapa] (47)
| | |
| | | /----------- RrC8984_p1 [Raphanus raphanistrum] (43)
| /----100---+ \---------100---------+
| | | \----------- Rsa1.0_07055.1_g00001.1 [Raphanus sativus] (71)
| | |
| | | /----------- XP_013607451.1 [Brassica oleracea] (31)
| | | /----100---+
| | | | \----------- GSBRNA2T00123484001 [Brassica napus] (61)
\----100---+ \----------100---------+
| | /----------- XP_009111374.1 [Brassica rapa] (32)
| \----100---+
| \----------- GSBRNA2T00027750001 [Brassica napus] (50)
|
| /----------- RrC3978_p1 [Raphanus raphanistrum] (22)
\---------------------100--------------------+
\----------- Rsa1.0_04616.1_g00002.1 [Raphanus sativus] (37)
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